KEGG   Salmo trutta (river trout): 115195746
Entry
115195746         CDS       T08542                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115195746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115195746
Spliceosome [BR:stru03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115195746
 Complex B
    115195746
SSDB
Motif
Pfam: RRM_1 RRM_7 Collagen
Other DBs
NCBI-GeneID: 115195746
NCBI-ProteinID: XP_029611805
Ensembl: ENSSTUG00000026887
LinkDB
Position
6:complement(26184268..26208233)
AA seq 555 aa
MMENGQGTGGKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEIPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQAQPIIDQLAEEA
RAYNRIFVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGRHKSFGFIEYDKPQSSLD
AVSSMNLFDLGGQYLRVGKAVTPPMPMLTPTQPGGLPPAAAVAAAAATAKITAQASMIPF
QRDLLAFQEAVTGASILGAMAGANQMGQMGQMGQMGQMGQMGSMGSMGIPQAVMAAQAPG
MITGVYRDMCVTPVRPNLPVLPQVGLVNPVLASPPVITNPAQLNPSLQELQKKKQEEKEM
LQDGTGQEMLSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVT
EECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMVSEMNKAIQALNDRWFGGRKVIA
EVYDQERFNSSDLSA
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgatggagaatggacagggcacaggtgggaagcttggcctgccacctctcaccccggag
cagcaggaggctctacaaagggcaaagaaatatgccatggagcagagcattaagagtgtc
ttggtgaagcagaccattgcccatcagcaacagcagctcaccaacttgcagatggcagca
gtgacaatgggctttggagatcctctctcacctttacaatcggtggcggctcagcggcag
cgtgctctagccatcatgtgccgggtgtatgtgggctccatatactatgagctcggggag
gacaccatcagacaggcctttgccccttttggccccatcaagagcattgacatgtcatgg
gactccgttacaatgaagcacaagggctttgcctttgtggagtatgagatcccggaggcg
gcacagctggctttggagcagatgaactcagtcatgcttgggggcagaaacatcaaggtg
gggcggccaggtaacattggtcaggcgcaacccatcatcgaccagctggcagaggaggcg
cgcgcctacaaccggatcttcgtggcttccgtccaccctgacctctcagacgaggacatc
aagagcgtctttgaggccttcgggaggatcaagtcctgcacgttagccagggaccccacc
acgggaagacacaagagctttggcttcatcgagtatgacaagccccagtcgtccctggat
gcagtgtcctccatgaacctgtttgacctggggggccagtacttgcgggtgggcaaggcc
gtcaccccgcccatgcccatgctgacccccacccagcctggtggcctgccgcccgctgca
gccgtggctgctgcagcagccaccgctaagataacggcccaggcaagtatgattcccttc
caaagggatctattggccttccaggaggctgtgaccggggcgtccatcttgggggcgatg
gccggggcgaaccagatgggccaaatgggtcagatgggacagatgggacaaatgggacaa
atgggttcgatgggctccatgggcatccctcaggcagtcatggctgcccaggcccccgga
atgatcacaggtgtgtatcgagacatgtgtgtgacaccagtgcgtcctaacctgccagtg
ctgccccaggtgggcctggtcaaccctgtgctggcctcaccgcctgtgatcaccaaccca
gcccaactcaacccctctctacaagagcttcagaagaagaagcaggaggagaaagagatg
ctgcaggatgggaccggccaggagatgttgagcgaccaagaacacatgagcatttcagga
agcagcgccaggcacatggtcatgcagaaactgcttaggaaatcagagtctacggtgatg
gtgttacggaatatggtggggccagaggacatcgatgacgacctggagggcgaggtaaca
gaagagtgcggcaagtttggtgccgtcaaccgggtcatcatctaccaggagaagcagggg
gaggaggaggatgccgagatcatcgtcaagatctttgtggagttctccatggtctcggag
atgaacaaggccatccaggcactcaacgaccgctggtttgggggtcgcaaggtcatcgcg
gaggtctacgaccaagagcgctttaacagtagcgacctctccgcataa

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