Salmo trutta (river trout): 115195757
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Entry
115195757 CDS
T08542
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115195757
04121 Ubiquitin system [BR:
stru04121
]
115195757
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115195757
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
115195757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
115195757
NCBI-ProteinID:
XP_029611828
Ensembl:
ENSSTUG00000033623
LinkDB
All DBs
Position
6:complement(26564492..26590529)
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AA seq
1127 aa
AA seq
DB search
MAEGSVTDSLDLNPDEASSRQKCNQQQSRRGRNREGHNRNWSGSNNYGPAPQQQQGHFHH
GVKQSHVQDNSTVPVNFHPPPYHQEDVPRGRGRGGGGRGAGGGGRGSRGQPPRWNRPGVD
TGPPGLPRGHHGLGGGGGYRPGTPPIDGPSWRRGDPGGRSGEVGPAYEDHQDTRPEKPRR
FSQEPRREDRGARSAKGPPHSLEKQENQDSHATGGGGWDLAEPREETPPSEMGARSRKGG
RAEERNPHVDAQQKFPEPKRRQGPIKEYPQEKDHERGARDTPSGHRDKLGSGTEEEPSWR
SQGRGQGRRTPLQDRGQRRTLNSDHRPGQKRWDNVPNKSKETQTGCLIEQLSEEKYECMV
CCEVIRVMAPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNIY
KCFCGKATNPEFQRSEIPHSCGDMCGKKRSGADCRHPCNILCHPGPCPQCPASVTKACIC
GRTSQPMRCGQATAIHCDKQCGATLNCSEHTCTQVCHSGLCQPCPLQVKQVCYCGVVSRE
VLCGTDKDRFDGSGHFCCQKACGKMLDCEAHRCEQVCHPGPCRPCPRSPRLVRSCPCGQT
ALAKLLELGYPERRGCSDPIPSCGKTCSKPLPCGSSETIHICEKLCHEGSCGPCSLTSTI
KCKCGSKTKDVPCAAIQNEEGLIFTCEKRCLKKRSCGRHKCGELCCVVSNQKGAEHKCSL
ICGYKLNCGLHRCQELCHRGNCQPCWQTSFDELACHCGVSVLFPPIACGTKPPECKNPCT
RRHECDHPVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLACNKVLLCD
LHRCRRICHRAECLAEGVCRQPCLLPRPNCGHPCNAPCHKGTSCPRNTCTAKVALQCDCG
RRKETVVCTEAASAHQRYAAIAMASKLCDMQLGDSVDMGLITKKEMKHTKLECDEGCAAL
ERNRRLAEALQIDPSVDPFNMRSSSSTYSDSLRVDARKDFKFVSEVEEEIKNLVELTSKG
KQSKRSHCFPPMNREHRKLVHELAEAYNVESVSYDSEPKRNIVITAIRGKSACPNSTLTS
LMERDTAVPRAPPPIAHIKHSSKADSVSSWSKAVKEEPVIDYFDVQD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctggatttgaatccagatgaggcttcgtcacga
cagaaatgtaaccagcagcaatcgaggaggggtcggaacagagagggccacaaccgtaat
tggagtggttctaataattacggcccagcaccgcagcagcagcaaggccattttcaccat
ggggtcaaacaatctcacgtccaggacaattcaacggtccctgtaaatttccatcctcct
ccctaccaccaagaggatgtaccaaggggtcgaggaagaggaggaggaggaagaggggct
ggtggagggggccggggctcaaggggccagcctccaaggtggaataggcctggggttgac
actggcccccctggtttacccaggggccaccatggactgggtggtggtggtggctacagg
cctggaacaccccccatagacgggcctagctggcgtcgaggagaccctggcggccggagc
ggagaggtggggcctgcctacgaagaccaccaggacacccgccctgaaaagccccgacgg
ttcagccaggagccgcggagagaagacagaggggcgaggagcgcgaaaggacctcctcac
tctctggaaaagcaggagaaccaggacagccacgctacaggaggaggaggctgggacctt
gctgagcccagagaagaaaccccaccatcagaaatgggggccagaagccggaaaggaggg
agagccgaggaaaggaacccccacgtcgacgctcaacagaaattccctgagcccaagcga
cgccaggggcctatcaaagaatatccccaggagaaggaccatgagaggggagccagagac
accccctctggccatcgtgacaaactgggctccggcactgaagaggagcccagctggagg
agtcaggggagaggccaggggagacgcacccccttacaggacagaggccagaggagaaca
ctaaattcagaccacaggcctggacagaagaggtgggacaacgtgcccaacaagagcaag
gagactcagacaggttgcctgatcgagcagctgtctgaggagaagtatgagtgcatggtg
tgctgtgaggtgatcagagtcatggctccagtctggagctgccacagctgcttccacgtg
ttccatctcaactgcatcaagaagtgggcccgctccccagcctcccaggcagacgaaacg
aatgacgggtggcggtgtccggcctgtcagaatgttgtcttccaacccccgaacatctac
aagtgcttctgtggcaaagcgaccaacccagagttccagcgtagtgagatcccacacagc
tgtggagacatgtgtgggaagaagaggagcggagcagactgcaggcacccctgtaacatt
ttgtgtcaccccggaccttgtccccagtgtcctgcttctgtcaccaaagcatgcatctgc
ggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcag
tgtggcgccaccctcaactgttcggaacacacctgtacccaggtgtgccacagcggactg
tgccagccttgcccgctacaggtcaagcaggtgtgctactgcggtgtcgtgtctcgggag
gtactctgtgggacggataaagaccgctttgacggctccggacacttctgctgtcagaaa
gcatgtggcaagatgttggactgtgaggcccaccgctgtgagcaggtgtgccaccctggg
ccgtgcaggccgtgcccacgctcccccaggctagtaaggagctgcccctgtgggcagacg
gccctggccaagctcctggagctgggctaccccgaacgccgcggctgctccgaccccatc
ccctcttgtggcaagacctgcagcaagcctctgccctgcggctccagcgagaccatccac
atctgtgagaagctgtgccatgagggaagctgtggtccctgctcgctcacctccaccatc
aaatgcaaatgcggctctaagaccaaggatgttccctgtgcagccatccagaatgaagag
ggactgatttttacttgtgagaagcgctgcctcaaaaaacgctcctgtggccgacacaaa
tgtggcgagctgtgctgtgtggtgagtaaccaaaagggtgcggaacacaagtgctctctg
atctgtggctacaagctcaactgtggcctccaccgctgccaagagctctgtcaccgtggg
aactgccaaccctgctggcaaaccagttttgatgagctggcgtgccactgtggggtgagt
gtcctgttcccccccatcgcctgtggcaccaagcccccagagtgtaagaacccgtgtacc
aggaggcacgagtgtgaccacccagtgttccacaactgccacagtgaggagaagtgccca
ccctgtacctacctcactcagaagtggtgcatgggaaagcatgagcgaaggagcaacatc
ccgtgccaccttcaggacatctcctgtggcctggcctgcaacaaggttctgctgtgtgac
ctccaccgctgccgccgcatctgccaccgggccgagtgtctggccgagggcgtctgccgc
cagccctgcctgctgccccggcccaactgtggccacccctgcaacgccccttgccacaag
ggcaccagctgcccgcgcaacacctgcactgccaaggtggcgctacagtgcgactgcggt
cggagaaaggaaacggtggtgtgcacggaagcagccagcgcccatcagaggtatgcagcc
attgccatggccagtaagctgtgtgacatgcagctgggtgactctgtagacatgggtctt
atcactaagaaggagatgaaacacaccaagttggagtgtgacgaggggtgtgctgcactg
gaaaggaacaggcgattggctgaggccctgcagattgacccgtcagtggaccccttcaac
atgcgctcctcctcctcaacgtacagtgacagcctcagagttgacgccagaaaagatttt
aagtttgtcagcgaggtagaagaggagatcaagaatctggttgagctgaccagcaagggt
aaacagtccaagaggagccactgcttcccccctatgaaccgggagcacaggaagctagtc
cacgagctggccgaggcctacaacgtggagagtgtgagctacgacagcgagcccaaacgg
aacatagtcatcaccgccatcagggggaagtctgcctgtcctaactcaaccctgacctcc
ctgatggagagagacactgcggtcccgagggctcctccacccattgcccatatcaaacat
agcagcaaggctgacagtgtgagcagctggtccaaggcagtcaaagaagagccggtgatc
gactactttgatgtccaggattaa
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integrated database retrieval system
