Salmo trutta (river trout): 115195821
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Entry
115195821 CDS
T08542
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115195821 (nphp3)
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
115195821 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
NPHP3_N
TPR_16
AAA_16
NACHT
ATPase_2
TPR_6
KAP_NTPase
AAA_22
Uso1_p115_C
DUF2225
TPR_19
AAA_14
AAA_19
14-3-3
ARM_TT21_4th
DUF4635
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
115195821
NCBI-ProteinID:
XP_029611958
Ensembl:
ENSSTUG00000005328
LinkDB
All DBs
Position
6:complement(28937350..28964033)
Genome browser
AA seq
1318 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYTAEYERLRKEYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIMVYDPDDSDDDDNHTTVTAAGTPCDYWGGGVLGSEPSMGSMMQLQQTFRGPEFAHSLC
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLISTQETQAELDIFTQSYSP
RLRSLCEGLGHFYLNVCFPEESAASYALERRQEMERSSVCVLLLKSSVTSCVLEDAEEAF
VKNPDGHPLVLYLRTVEAHPLSGPTRQLLERVNAADKAAKVKVVDHGGSPEEGASMIYTQ
LEKVIKQELLGLEGSDVDGKDSGIDEGREEDSGDVLWDLHDEQEQIEAYQQACSAAAQLG
FQKYIDRLNDMVAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKHSPNTLFLYHFVGRPL
STSSEPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSSRHQGNIIIIIDSI
DQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLNPREVKSVINTEC
LAADVKLTKDQDKKLERHCRSASTCNALYVTLLAKMITNCRCAWSLEKTLEQCLLCQDTM
SLYSLGLKVALDSLSTDGERHVMREMLCLVCASHNGVSESEVLAVFPDLGLPVLSSLLYT
LQRLCIVGLGCGLIRFQHLQAAEAVRLEFMDGGTCSPAYREKLIHYFSQQLSQDRVTWRV
ADELPWLLQQQEDRAKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKHYEKSCESEDSMIRLGNLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHPSVA
LSLHQLAGVYVQWRKYGNAEQFYKQALEISENAYGSDHACVARELDSLAMLYQKQNKYEQ
AEKLRKRSVRIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDTADCAKTFNELGVLYYL
QNNLEAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDIR
KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALDIREKSFGPKHPSVATALVNL
AVLYCHLKKHSEALPLYEQALRVYEDSLGRSHPRVGETLKNLAVLRSVIYRKPISTANTN
TPGMASSFSISSSEKTCKLPPHFPVELHLAPHLHVLVEQTAFLLLSQVLVVVADTGNV
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcctcctccctggtgagccctggggaggtgatagaggatgcgtatgggggc
gagggtggggaggcctgtgagatacctgtggaggtcaaacctaaagcccgcctcctgcgg
agctcctttcgccgagggcccagggtgattggggccagcttcaaatctacaggctctgtg
gacctggagtacaccgccgaatacgaacggctccgcaaggagtatgagattttccgggtc
agcaagaacaatgagatcacctccatgcagaagaaggaggccaagctggacgaggagaac
aagaggctgagagctgagctgcaggctctgcagaagacctaccaaaagatcctgagggag
aaggagagtgccctggaggctaagtaccaagccatggagagagctgccacctttgagcac
gacagggacaaagtcaaacggcagtttaagatcttccgggagaccaaagagaaggagatc
caggacctgctgcgagccaagagggacttggaggccaagctacagcagctgcaggctcag
ggcatcatggtgtacgacccggacgactcggatgacgatgacaaccacaccactgtcacg
gctgcagggactccgtgtgattactggggtggtggggtgctgggcagtgagccctctatg
ggcagcatgatgcaactgcagcagaccttcagaggaccagagtttgcccacagcttgtgc
gatgtggagggcccgtttgccaatgtcagcagagatgactgggacgctgctgtggccagt
ctgctgcaggtgtctcctcacgtgtcccaggcgttatggagcaacacggtgcgctgctac
ctgatctctacccaggagacacaggctgagctggacatcttcacccagagctactctccc
aggctgcggagtctgtgtgaggggctgggccatttctacctgaacgtctgtttccctgag
gagagtgcagcctcctatgcactggaacgcagacaggagatggagaggagctctgtgtgt
gtgctcctcctcaaatcctccgtcacgagttgtgtgttggaagatgcggaggaggccttt
gtgaagaacccagacggtcatcccctggtactctacctcaggaccgtggaggcccaccct
ctcagcggccccaccagacaactgctggagagggtcaacgccgcagacaaggcagccaaa
gtcaaggtagtggaccatggtggctccccagaggaaggagcgtctatgatctacactcag
ctggagaaagtaatcaaacaggaactgctgggtttggagggcagcgacgtggacggtaag
gattcggggatagacgaggggcgcgaggaggattcgggggacgtgctgtgggacctgcat
gatgagcaggagcagatcgaggcctatcagcaagcctgcagcgccgcagctcaactgggc
ttccagaagtacatagatcgtctgaatgacatggtggcagcccctccacccacccctcca
ctgctggtatcagggggacccggctctgggaagtctctcctgctgtccaaatggattgag
ctgcagcagaagcactcccccaacacgttgttcctgtaccattttgtggggcgacctctt
tccaccagctctgagcccgtactcattattaaacgcctcactgtcaagctgctgcaacat
ttctggtccatctctgggttatccatggacccctccaagatcctagaggagttccctcgc
tggctggagagactgtcttccagacaccaaggcaacatcatcatcatcatcgactccatt
gaccagatacagcaagcagagaggcacatgaagtggctgatcgaccccttgccggtcaac
gtcagagtggtggtgtctgtcaacgtggagacctgtccccaggcctggagactgtggccc
accctccacctggaccccctgaaccccagagaggtgaagagtgtcatcaacacagagtgc
ctggcagctgacgtcaaactcactaaagaccaggataagaaactggagagacactgtcgc
tctgcatccacatgtaacgccctgtatgtcaccctgctagccaagatgatcaccaactgt
aggtgtgcctggtcgttggagaagactctagagcagtgtctgctgtgtcaggacaccatg
tctctgtacagcttgggcctcaaggtggcgctagattctctcagcacagacggggagaga
cacgtcatgagagagatgctgtgtctggtgtgtgccagtcacaacggtgtgagtgagtcg
gaggtgctggcggtgtttccagacctgggcctgcctgtcctctcctccctcctctacacc
ctgcagagactctgtatcgttggcctgggctgtggactcatcaggttccagcacctacag
gctgcggaggccgtccggctggagtttatggatggagggacctgctctcctgcctacaga
gagaagctcatccactacttcagccagcaactcagtcaggacagggtgacatggcgggtg
gcagacgagctgccctggctactccagcagcaggaggacagggccaagctgcagctcagc
ctccttaacctctttgtctcccagaacctctacaagaggggccatttctctgagctgctg
gcctactggcagtatgtgggcaaagacaagagctccatggccactgagtactttgactct
ctgaagcactatgagaagagctgtgagagtgaggacagcatgatcaggctgggcaacctg
tatgagacactgggtcgcttcctcaaagacttgggcctgctcagtcaggcggtagctccc
ttacagaggtctctggagatccgggagacggccctggacccggaccaccccagtgttgcc
ctgtccctacaccagctggccggggtttatgtccagtggaggaagtatggcaatgcagag
cagttctacaagcaggccctggagatcagtgaaaacgcctacggctcagaccacgcctgt
gtcgcacgcgaattggactccctggccatgctctaccagaaacagaacaagtatgagcaa
gccgaaaaattgaggaagaggtctgtgaggattcgccaaaagactgcccgccagaaaggc
catatgtatggcttcactctgctgcgtcggcgggccctccagttagaggagctgactctg
ggtaaagacacagcagattgtgccaagaccttcaacgagctgggagtcctctactatctc
cagaacaacctggaggcggccaaggtgttcctgactcgttctctggagatgcgtcagcgt
gtgttggggccggaccaccctgactgtgcccagtccctcaacaacttggcggccctacac
actgagaggagagagtacgagaccgcagaggacatgtacgaaagagccctggacatccgg
aagagagccctgtcccctgaccacccctccctggcctacaccctgaaacacctggcaatg
ctctacaaacgcagggggaagctggagaaggctgttcctctgtatgagctggctctggac
atcagggagaagagttttggacctaaacaccccagtgtggccacagcattggttaacctg
gctgtactctactgccacctgaagaagcacagtgaagcgctgcccctgtatgaacaggct
ctcagagtgtatgaggacagtctgggacgctcacacccacgtgtcggagagacgctgaag
aacctagctgtactcagatcagtgatttacaggaagcccatttctacagccaacaccaac
acccccggaatggcttccagtttctccatctcttcatcagaaaagacttgtaaactccct
cctcactttcctgtagaactccaccttgcgcctcatctccatgtgcttgtggaacagaca
gcgtttctcctgctcagtcaggtgctggttgtggtagcggacactggcaatgtttag
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integrated database retrieval system
