Salmo trutta (river trout): 115195911
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Entry
115195911 CDS
T08542
Name
(RefSeq) neural cell adhesion molecule 2-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
stru
Salmo trutta (river trout)
Pathway
stru03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115195911
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115195911
04517 IgSF CAM signaling
115195911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115195911
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115195911
04090 CD molecules [BR:
stru04090
]
115195911
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115195911
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
115195911
04091 Lectins [BR:
stru04091
]
115195911
Membrane trafficking [BR:
stru04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
115195911
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NCAM1/2
115195911
CD molecules [BR:
stru04090
]
Proteins
115195911
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
115195911
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
Others
115195911
Lectins [BR:
stru04091
]
I-type lectins (Siglecs)
115195911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
Ig_6
Pur_ac_phosph_N
Ig_VEGFR-1-like_5th
Ig_5
Izumo-Ig
Adeno_E3_CR1
C2-set_3
C2-set
Motif
Other DBs
NCBI-GeneID:
115195911
NCBI-ProteinID:
XP_029612115
Ensembl:
ENSSTUG00000004313
LinkDB
All DBs
Position
6:39791573..40237607
Genome browser
AA seq
839 aa
AA seq
DB search
MIIQLLWFLVCGSQAVLQVSISLNKVELSVGESKFFKCTVIGEPVNLEWFNPQGERIVSS
QRVALHTGEDSSRLTIYNAEVEDAGIYRCQATDAQGQTQEATMVLEMYQKLTFRNVRSPQ
EFRHDEAAEVVCDVIASPAPAVSWFYQKGFRSMEITEEHYSRFQVLPNNNLQIHKVTKAD
EGMYRCEARVEARGEIDFVDIELVVNVPPVLSVLQQAFNATADYQESVTFTCVTSGSPDP
EVTWHRKGQQLERSEQYVLNTMEAGRSTLTIRNIIQGDGGDYTCRATNKAGAEERELFLK
VFVQPHITQLRNVTAVEGSAAMISCVAEGEPLPEISWRRANDGQSFADGDKSQDGRVDVR
GRHGKSMLTISGVKLTDLGRFDCEALSRIGGHQKSMFLDIEYMPKFQTNQTIFYSWEGNP
INISCDVKSNPPATMLWRRERLTISAEGTANTRIHTTDGKSLLEVTPVSDRDFGRYNCTA
RNNIGVKYQEFILAQADVPSNPYSVRLSAMSQRIATVTFMKPDSHGGVPIGHYLVNYKDV
GSQDWRDVKSHGVQTIVLLTGLEPNTTYEVRVAAVNGKGQGEFSHTESFQTLPIREPSPP
AVHGQRGMGKAYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVSGQHDFALLQPLQW
NTRYEVEITARNVKGLSEPTFYQFFMPQKPDIIADSLFSGLGLGPVVGLGLVGFLLVLVV
VDVSCYFLRQCGLLMCITRKLCSKKTTTSGKSKEMEEGKAAYLGDGSKDPIVEMRTEEER
ITNHDGSPVHEPNETTPLTEPEKLPLKEENGKETLKADMIEIKVHSDNSIHTKQDDSKA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgattatccaactcctatggtttcttgtctgcggcagtcaagctgttctgcaggtatcc
atatccttgaacaaggtggagctaagtgtgggagagtccaagttcttcaaatgcacagtg
atcggagagccggtgaacctggagtggtttaacccccagggggagcgcatcgtgtcgtcc
cagcgtgtggccctgcacaccggggaggacagctccaggctgaccatctataatgctgag
gtggaggacgcgggaatctaccgctgccaggccaccgacgcccagggacaaacgcaggag
gccaccatggtgctggagatgtaccagaagctaacgttccgcaacgtgaggtccccccag
gagttccgtcacgacgaggcggcagaggtcgtgtgtgatgtcatcgcctcgccggcaccc
gctgtctcttggttctaccaaaagggcttcaggagcatggagatcacagaggagcactac
agcaggttccaggtgctgcccaacaacaacctgcagatccacaaggtaaccaaggcggac
gagggcatgtaccgctgcgaggcgcgagtggaggcccgcggcgagatcgactttgtcgac
atcgagttggtggtgaatgttcctcctgtgctgtcggtactacagcaggcattcaatgcc
acagcagattaccaggagtcagtgactttcacctgcgtcacatcaggatcccccgacccc
gaggtcacctggcacaggaagggccagcagttggagaggtcagagcaatatgtcctcaac
accatggaggcaggcaggagtaccctgaccatccgcaacatcatccagggggacgggggc
gactatacctgccgagccaccaacaaggccggggcagaggagagggagctcttcctcaaa
gtgttcgtccagccacacatcacccagctgcgtaacgtgacggcggtagagggcagcgcc
gccatgatctcctgcgtggctgagggggagccgctccctgagatctcctggaggagagcc
aatgatggtcagagcttcgccgatggagacaagagccaggatgggcgtgtggacgtgcgg
ggccgtcatggcaagtccatgttgaccatcagtggggtgaagctaactgacttaggccgt
tttgactgtgaggccctcagcaggatcgggggccaccaaaagagcatgttcctcgatata
gagtacatgcccaaattccagaccaaccaaaccatcttttactcgtgggagggcaacccg
ataaacatcagctgtgacgtcaagtctaacccgcccgccaccatgctgtggaggagagaa
cgcctcaccatctcagctgagggcactgccaacacacgcatccacacgaccgacggcaag
tccctgctagaggtcaccccagtgtccgacagggatttcggacgctacaattgcacggcc
cggaacaacatcggagtgaaataccaggagttcatcctggcccaggcagacgtgccctcg
aacccgtactcggtgcgcttgtcggccatgtcacagcgcatcgccacggtgacattcatg
aaacccgactcacatggcggggtacccattggccactacctggtcaactacaaagacgtg
ggctcgcaggactggagagacgtcaagtcacatggcgtccagacgatagtactgctgaca
ggcctagagcccaacaccacctacgaagtgcgagtggctgcagtcaatgggaagggccag
ggggagttcagtcatacggagtccttccagactttacccatacgtgagcccagccccccg
gcagtgcatggccagagagggatgggcaaggcctaccggctgggccttgtcaagcaagac
gacgggggcatgcccatcgtggagtacattgtcaagtacaagacagacaaggaggagcag
tggatgacaaagctggtgtcggggcagcatgactttgccctgctgcagccgctgcagtgg
aacacgcgctacgaggtggagatcacagctcgcaacgtcaagggcctctcggagcccacc
ttctaccagttcttcatgccccagaaacccgacatcatagcagactccctgttcagcggc
ctggggttggggcctgtggtgggcctgggcctggtcggcttcctcctggtcctcgtggtg
gtggacgtcagctgctacttcctgcgccagtgcggcctgctcatgtgtatcacacgcaag
ctctgcagcaagaagacgaccaccagcggcaagagcaaggagatggaggagggcaaggcc
gcatacctgggcgatgggtccaaggatcctatcgttgagatgagaacggaagaggagaga
ataactaaccacgatgggagcccagtgcacgaacccaacgagactacacctctcacagag
ccagagaagctaccgctgaaggaggagaacgggaaggagacgctcaaggccgacatgatc
gagatcaaagtgcacagcgacaacagcatccacacaaagcaggacgacagtaaagcataa
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integrated database retrieval system
