Salmo trutta (river trout): 115195965
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Entry
115195965 CDS
T08542
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115195965 (taf1a)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
115195965 (taf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Mob1_phocein
Motif
Other DBs
NCBI-GeneID:
115195965
NCBI-ProteinID:
XP_029612219
Ensembl:
ENSSTUG00000002585
UniProt:
A0A673WAS1
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Position
1:complement(41342845..41349272)
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AA seq
460 aa
AA seq
DB search
MDDLESEPRVPGEEQGENESSDDDESINRKRIKKQNLPLAPPLFKETPCETGFHKTTRNC
LQHIREDLLHNRWQDAADYMASYSQTLEDTTANMPQLYAEIIWRIGTEILHHHPDSKLED
YNSFYERVKHSGVKNYLKVCLEHSFHLLVNGQFEDAKRQLSIAESWRYGKLSAGQSQRIR
LIQAYSGFLDYFIWCDKKATASSTDEYDAAVNQEMHSYFRQSSVNLKEIMKLPGVWDPFV
LSYIDMLEFYNDHEGAVKVLNDYAYDKSFPPNPNAHVYLYRYMKKQNHPLKKLLKVLKIL
HKLVPSHELMPEYCSLLVQSEKEGDLQKALGVVLDLLDYSSWRSNLDVWNHLMNIIKRLR
MKKQWLKIFAEEMGYRKDWWLAIHFSTFQARKDSAENRELLEVKSFVVGAFCPRYTSMYC
GVGKAGRKGVTSEVQKAKRNPKQLRNIRRLRRESGQQSQD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctggagtcagaacccagggtgcctggagaagaacagggcgaaaatgagtct
tcagatgacgatgaatcaatcaacagaaaacgaatcaagaaacaaaaccttcccctggcg
cctcctttatttaaagagacaccctgtgagactggctttcacaagaccacaaggaactgc
ctccagcacatcagggaggacttgctgcacaatagatggcaggatgccgcggattacatg
gccagttactcacagacactggaggataccactgcaaacatgccacaactctacgctgag
ataatttggaggataggcacagagatactacaccaccatcccgactcgaagctggaagac
tacaacagtttctatgagcgagtgaaacactcaggagtaaagaattacctgaaggtctgt
ctggagcactcgttccatctcctggtcaatgggcagtttgaggatgccaagcgtcagctg
tccatcgctgagagctggaggtatggcaagctgtctgccggtcagtcccagaggattagg
ctgatccaggcctatagtggcttcctggattacttcatctggtgtgacaagaaagccact
gcatccagcacagatgagtatgatgcagctgtcaaccaagaaatgcatagctacttccga
caatcttctgtgaacctgaaggagatcatgaagcttcctggcgtctgggatccttttgtt
ctgagttacattgatatgctggaattctacaacgatcacgagggagctgtgaaggttcta
aatgactatgcctatgacaagagtttcccccccaaccccaatgcccatgtctacctatac
cggtacatgaagaaacagaaccacccactgaagaaacttctcaaagtgctgaagatcctg
cataaattggtcccaagtcatgagttgatgcctgaatactgttctcttctggtacagtcg
gagaaagagggggatcttcagaaggctcttggtgtggttctggatctcctggactactcc
agttggaggagcaacttggatgtctggaaccatttgatgaacatcatcaagagactgagg
atgaaaaagcaatggctgaagatttttgcagaagagatggggtacagaaaagactggtgg
ctagcaatacacttctcaacattccaggccaggaaggattcggcagagaatagagagcta
ctggaagtgaagagctttgtggttggagccttttgtcctcgctatacctccatgtactgc
ggtgttggtaaggctggccgaaaaggagtaacttctgaggttcaaaaggctaagaggaat
cctaaacagctaagaaatataagaaggctcagaagagaaagtggacagcaaagccaagac
tga
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