Salmo trutta (river trout): 115195995
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Entry
115195995 CDS
T08542
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115195995
04121 Ubiquitin system [BR:
stru04121
]
115195995
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
115195995
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115195995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
ZBED1_RNase-like_helical
ZBED1_RNase-like
Serglycin
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
115195995
NCBI-ProteinID:
XP_029612278
LinkDB
All DBs
Position
6:complement(44597083..44600948)
Genome browser
AA seq
693 aa
AA seq
DB search
MEAKGASSSNLHLVAHPRAKSKVWRYFGFDTDADGCILHWRRIYCRICMTQIAYSGNTSN
LSYHLEKNHPVEFCEFVKSNTEQMREAVATAYSKIKTEPMQQQCQEAILKQSPAFENINR
RHNDLTSAIINFVCEGMYPVSVVEEPTFQALLRTADPRYLPPSRIDVAMKALPQRYNQIR
DAVLGEVAGVVNCGVSTDLWQSQTQNRTYISLSMHSLNQNGLGSGFSMSSKCLKTFEVPE
DNTAENITRALYEAFVEWGITHKVNGATTNGSLDIVKACSLLDLSVQMPCLGHTINRGMD
EAFQLPRIDCFLGRCRKLVDYFQQSVMAMYLLREKQRQQGLAQCVLIRDRVRSWVTTLTM
LQRLKEQQAIISVVLMEDSDNHQLSFKDSEWNMVEGLIGVLQPFKLVADMITDCRYPTIS
MVRPVLHMLLNTTLKAKEGDAKEVGMAKEVISKVLSSTYPQTSEIATFLNVATFLDPRYK
RLPFLSPHDRSQVESKVIEEAKAILEKQRNENVVTDELAPLSDEPPNKKQALDKPSPSCS
NAGNPLAVIFCQSGNDENQEELHAQVVEELSNFKSQKILGLNEDPLHWWSDRMGLFPTLP
KVLQKYWCVPATSVPSHRLFSSSGTFFCGKRNRLTPAHVDQQVFLYENSRRCNEAEPVED
DSGEWGLGQEQDSGSGHGITGQATAHYQTVTIP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaaaggtgcttcctcatctaatctccaccttgtcgcacatccaagggcaaaa
agtaaagtatggaggtatttcggctttgacaccgatgcagacgggtgtatactacactgg
aggaggatctactgtcgcatatgtatgactcaaatagcatattccgggaacacctctaat
ctctcgtaccacctggagaagaaccacccagttgagttctgtgagtttgtgaagagcaac
acggagcagatgcgtgaggcggtcgcaacggcctactccaagataaagactgaacctatg
cagcagcaatgtcaggaagccatcctgaagcagagcccagcgtttgaaaatatcaaccga
aggcataatgatctgacgtctgcgatcatcaactttgtctgtgaagggatgtaccctgtg
tctgtggtggaagaacccacctttcaggcccttttaaggactgcagatccaagatacttg
ccccctagcagaatcgacgtagcaatgaaggccctaccacagaggtacaatcagatccga
gatgcagtgctgggtgaggtggcaggggtggtgaactgcggtgtctcaactgacctttgg
caaagccaaacccagaacaggacctacatctccctgtccatgcactctctgaaccaaaac
ggactaggttctggtttctccatgagttccaaatgcctgaaaacttttgaagttccagag
gacaatacagctgagaatattaccagagcattgtacgaagcctttgtcgaatgggggata
actcacaaagtcaacggtgccaccactaacggttcattggacattgtgaaagcttgctct
cttctggatctatccgtgcagatgccttgccttggccacactataaatcgagggatggat
gaggcctttcagctgcccagaattgactgctttttgggacgttgccgcaaacttgttgat
tatttccaacagtccgtgatggctatgtatctgctgcgagagaagcagaggcagcaaggc
ctagctcagtgtgtcctcatcagagacagggtccgatcctgggtgaccacactgactatg
ctccagcgcctgaaagagcagcaggccattatcagtgtggtactcatggaggacagtgac
aaccatcagctgagtttcaaggacagtgaatggaacatggttgagggcttgattggagtc
ctacaacctttcaaactggtagctgacatgataacagactgtaggtatccgaccattagt
atggtgaggcctgtccttcacatgctgctgaacacaaccctcaaggccaaagaaggggac
gcaaaagaggttggcatggccaaagaggtcatctccaaggtgttgtccagcacctacccg
cagacgtctgagattgcaacgtttctcaacgtcgccactttcctggatccccgttacaag
aggcttcctttcctgtccccccacgaccgctcccaagtggagagtaaagtcattgaggag
gccaaagccattcttgagaaacagaggaatgagaatgtggtcacagatgaattggctcct
ctttctgatgagccacccaacaaaaaacaggctcttgacaaaccctctccttcatgtagc
aatgcaggcaaccctttggctgtgatattttgccagtcaggcaatgacgagaaccaagag
gagctacacgctcaggtcgtggaagagctgagcaacttcaaatcccagaagatcctgggt
ctcaacgaagaccctctccattggtggtcggaccgtatgggcttatttcctactctcccc
aaggtgctccagaagtactggtgtgtccccgccactagtgtcccctcccacagactgttc
agttcctcagggactttcttctgtggtaagaggaaccgcctcaccccggcacatgtagac
caacaggtgtttctctatgaaaactcacgccgctgcaatgaggctgaacctgttgaggat
gactcaggggaatggggcttgggacaggagcaggactctgggtcaggccatggaataact
gggcaggccactgcacactaccaaacagttacaataccctaa
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