Salmo trutta (river trout): 115196039
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Entry
115196039 CDS
T08542
Name
(RefSeq) integrin beta-6-like
KO
K06589
integrin beta 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115196039
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115196039
09142 Cell motility
04820 Cytoskeleton in muscle cells
115196039
04810 Regulation of actin cytoskeleton
115196039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115196039
04515 Cell adhesion molecules [BR:
stru04515
]
115196039
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115196039
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115196039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115196039
NCBI-ProteinID:
XP_029612372
Ensembl:
ENSSTUG00000005572
LinkDB
All DBs
Position
6:45886693..45902162
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AA seq
786 aa
AA seq
DB search
MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPRCAWCTQQNFTDSFLISERCDT
PYVLQERGCPQDQVEFPVTNSEVLRDQPLGKKTGNTNITQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHVLPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVENNILLIFAVTENQKHNYENYADFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFIAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACHQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGAPESCSGQGECYCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGLLCGGHGDCDCGECVCQSGWTGEYCNCSSSRDTCVSEDGALCSGRGKCVCGKCV
CSMPGASGATCERCPTCGDSCNSARTCVECHLQAEDEATEECVQRCSIPHVFVNNSTEHD
ESRSTLCTLKSENNCFISFSVVAGDTGSTVYNLKMYDCPEPPNIVMIVLGVSLSILTIGL
ILLVVWKLLISVHDRSEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSTGGPKVDI
HSMDGY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagtgcagtgacttgtgacgagtgtctccagcttggtccccgctgt
gcatggtgcacacaacagaatttcacagactcgtttttaatcagtgagcgatgtgacacg
ccgtacgtcctccaagagagaggctgtccccaggaccaggtagaattcccagtgaccaac
tccgaggtcctccgggaccagcctctcgggaagaagacaggaaataccaacatcacacag
atatccccacagaagatggccctcaaactcagaacgggcagtgaggtgaccttccagatc
agcgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaggagatg
gcaaagctcaccagtaaattcagacttggattcgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggagaacccttgtaggagtgtggatgagagc
tgtctgccgacgtttggatacaaacacgtcctacccctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgttggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggagaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcagat
ttcatacctggcgccacggtgggggttctggaatcagattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcggtctgagatagagctggaggtactaggagacaca
gaggatctacagatctccttcatagcgatctgtcaggatgggacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgacggtagaactc
tcagagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcaccagacccccgagcccaac
agcagccactgcagcctgggccggggatctctggagtgtggctcctgcctgtgtgatcca
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggcgctccggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagtttcggacgcgtctacggggcctactgcgagtgcgacgacttctcg
tgtgtgaggttccgagggttgctctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcagagtggctggacgggggagtactgtaactgcagcagcagcagagacacgtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgctccatgcccggagcctctggagccacctgtgaaaggtgccccacctgtggagactcc
tgtaactctgctaggacctgtgtggagtgtcatctacaagcagaagacgaggccacagag
gagtgcgtccaaaggtgcagcatccctcacgtcttcgtcaacaattccacagaacacgat
gagagccggtccacgctgtgtaccctaaagagcgagaacaactgcttcatctctttcagt
gtggtggccggagacacggggagcactgtgtataatctaaagatgtacgactgtcctgag
ccccccaacatagttatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctggtggtgtggaagctgctgatctcggtccacgaccgcagtgaggttgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttataaaagcacagggggaccgaaagttgatatt
cattcaatggatggctactga
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