Salmo trutta (river trout): 115196078
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Entry
115196078 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115196078
04082 Neuroactive ligand signaling
115196078
04519 Cadherin signaling
115196078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115196078
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115196078
SSDB
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115196078
NCBI-ProteinID:
XP_029612461
LinkDB
All DBs
Position
6:complement(47142745..47174604)
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AA seq
471 aa
AA seq
DB search
MMALSTDTEDKMPSLSTMKHMWISLLLVCITCQVGLGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAG
SEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFG
VTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDG
KKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSEAEVL
DPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacacagaggacaaaatgcccagtctttctacaatgaaacac
atgtggatctctctcttgctggtgtgtattacatgtcaagtaggtcttggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacgcggatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggaa
tacaccattgatgtgtttttccgacaaagctggaaagacgagcgcctgtgtttcaaagga
cccatggagatgctgcccctgaacaacctcctggccagtaacatctggaccccagacaca
ttcttcctcaacgggaaaaagtctatcgcccacaacatgaccacgcccaacaagctactg
agactgaaggatgatgggacgctgctctacactatgaggttaaccatatcggcggagtgt
cccatgcagttggaggacttcccaatggatgctcatgcttgccctttgaagtttggaagc
tatgcctatccagtctctgaggtggtgtacctctggcaaactggtgctgccaagtctgtc
gtggtggcagaagacggatcccgtctcaaccagtaccacctgattggccagaccgcgggc
tctgaggacatctacaccagtcgaggacagtacacagttatgatgtgtcacttctacctg
aagaggaagattggttactttgtcattcagacctacatgccctgcttcatgaccgtgatc
ctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtctttggt
gttactacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaag
gtggcctacgccacagccatggattggttcatcgctgtgtgctatgcattcgtcttctcc
gcacttatcgagtttgccaccgtcaactatttcactaagaggagctgggcgtgggatggt
aaaaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaag
cccaacaacgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctct
atctccaccatctccaacagcacctccatacaactaagatcgtctgaagcggaagtcctg
gaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggatagttttc
cctgtcctgtttggaacctttaacctagtgtactgggctacttacctcaacagagaaccg
gtcatcaaaggagtcaacatattggctccaacatag
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