Salmo trutta (river trout): 115196084
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Entry
115196084 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115196084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115196084
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115196084
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115196084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
TRIM_CC
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115196084
NCBI-ProteinID:
XP_029612471
Ensembl:
ENSSTUG00000016784
LinkDB
All DBs
Position
6:complement(48431849..48485187)
Genome browser
AA seq
685 aa
AA seq
DB search
MDALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRAASSGPLALLPHSGPNSPSEDAGRFALALVP
ASTAMTSPGTPPSHVQCQFCEQDPPQDAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLI
EPMSDCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRYEKLKQA
LDSNLSHLVKRNNELEGLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQNAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPGIREELCTASYDTITVH
WTSDDEFTVVSYELQYAIFTGQANIVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETASKKGHGQERF
TSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQNLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPEHLEGLETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggaccca
ctccttctgccctgtgcccacagcctgtgcttcggctgcgcccatcgcatcctgatatcc
cactgcgcctccaacgagcccgtccagtccatcggagcattccagtgccccacctgccgc
tatgtcatctctctcagtccgcagcgtggcctagaaggactgaaacgcaacgtcaccctc
cagaacataatcgaccgcgtccagagggccgcctcctccggccccctggccctgctgccc
cacagcgggcccaactcccctagcgaggacgccgggcgattcgccctggccctggtccct
gcctccaccgccatgaccagccccgggacgccgcccagccacgtgcagtgccagttctgc
gagcaggacccgccgcaggatgccgtcaagacgtgcgtgacgtgcgaggtgtcatactgc
gacgagtgcctgcgcgccacgcaccccaacaagaagcccttcacgggccaccgtctgatc
gagcccatgtcggactgccacctgcgggggctgcagtgcctggagcacgaggaggagaaa
gtgaacatgtattgcgtcaccgacgaacagctcatctgctcgctgtgcaaactggtggga
agacaccgagaccaccaggtggcggccttgagcgaccgctacgagaaactcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaacaatgagttggaagggttgatggga
aagttgatccaaacctgtcaacatgtagaggtcaatgcatcacggcaggagggaaagctg
atggaagaatgcgacctcctgattgatatcatccagcaaaggagacagatcattgggacc
aaaatcaaggagggaaaggcggtccggatcaggaagctagcccagcagatctccaactgt
aagcagtgcatcgaaaggtcctctgctctcatcacccaggccgaccagaccctgaaggaa
acggaccacgcccgcttcctccagaacgcgaagagtatcaccgaaagggtttccatggcg
accgcctcctctcaggtcctgattccagagatcaacctgacggacacctttgacacgttc
gctctggacttcaccaaggagaaaaagctgctggagagcctggactacctgacagcgcca
agtcctccgggcatcagagaagagctctgcactgcatcgtacgacaccatcaccgtccac
tggacctcagacgacgagttcacagtggtttcctatgagctccagtatgctatcttcaca
gggcaagccaacattgtcagcctgtgtaactctgcagacagctggatgattgtgcctaac
atcaagcagaaccactacaccgtccatggcctgcagagcggcaccaagtacatcttcatc
gtcaaagccatcaaccaggcaggtgcccgcagcagtgagccagggacactcaaaaccaac
agccaaccttttaagctggaccccaagtccgcccacaagaagctgaaggtctcccatgac
aacctgacggtggagcgcgacgagacggcatcgaagaagggacacggccaggagcgcttc
accagccagagtagctacggagtcgtcggcaacgtttacatcgacagcggacgccactac
tgggaggccctgattggaggaagcacatggtacgcggtgggcatcgcctacaagtcggcc
cccaagcacgagtggatcggcaagaactcggcctcctgggtcctgtgccgctgcaacaac
tcgtgggtggtgcgtcacaacagcaaggagctggccatcgagccttcaccccacctgcgc
cgcgtgggtgtcctgctggactacgacgccggctcgcttaccttctacgacgccgtgggc
tcacagaacctgcacacgttccacgtgtccttcgcccagcccgtgtgtcccgtcttcaat
gtgtggaacaagtgtctgactgtcctcacgggtctgcccatccccgaacacctagaaggg
ttggaaacccaggactga
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