Salmo trutta (river trout): 115196129
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Entry
115196129 CDS
T08542
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115196129
Pattern recognition receptors [BR:
stru04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115196129
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
LRR_9
TIR_2
LRR_NXF1-5
LRR_EndoS
LRR_LRWD1
LRRNT
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
115196129
NCBI-ProteinID:
XP_029612585
Ensembl:
ENSSTUG00000049983
LinkDB
All DBs
Position
6:complement(49945392..49949576)
Genome browser
AA seq
963 aa
AA seq
DB search
MPGQRCGSTFSQLRLFLCFLMYCWVLADPVCGYFLKNCTIRGNLSDPSDMIVLCQKRNLE
VIPIDIPQNVSVLNVAMNNISKIGKLDFKGLSNLKNLNMSRNQISQVDDGSLGHLEALQE
LGLAHNRLTTLSDHMFQGLVNLSLLHLDNNLISTIGSSSFQLLSSLKTVNLTNNNLYNMK
DVQPIVQLPHLQELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGIFRITADVLPYLE
VLDIAYCGQLGRMEWDVLDRSFLSNVKRLNLSGIEMSFERMVMVLQTVNSSLVHLRLYDI
GEERVKALTDIACYIPTLSLLRLHHNNISVLSKEFLQSCKQLTEMDVCNNNINQLSEFSF
RSMEQLSTLKLGHNSLSSVPNATRNLPTLKILDLSFNIINKLGCSDFANLTGLTQLFLFH
NQISKLPGCVFQDLKELRILKVGSNKILTLNDAFMRGLYKLEYLSMSYNKLSSISKGGFK
GLASLKTLLLFDNQIASLEDGAFEGLVNLTELRLESNKITQIDIRNTVLTGLPRFRTLDI
SCNFITYVNDDQLDPPPFSHLTSLENLHIHSQRHKGLSHLPSNFLEGLKSLLAFKAGNLN
IKDLHPNTFIHTPRLWFLDISKNAFTALKPELFHPTPRLNRMYLSKTRLQSLDFLIGANL
SRVTFLQVSKNDITVVNERVLRSLPALTYLDMQDNAFTCGCSDAWFVHWMENNNQTQVVG
AGEFTCNYPADLKDTKLLDVELQFCTVHLGLYYYISTTCLVLLTLVASFAYHFLKWQVIY
GYYLFLAFLYDTKQRNKLTPHGCQYDAFISYNAHDEPWALRELLPELEGEQGWKLCLHHR
DFQPGKPIIDNIMEGIYGSRKTICVISRRYLESEWCSREIQVASFRLFDEQKDVLILVFL
EEIPTHQLSPYHRMRKLVKRRTYLSWPRAGEQTGVFWQQLRLALETKDGPAEENPILSGV
QAL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgccaggacaacgatgtgggtctacattctctcagctgagactctttctttgtttcctg
atgtattgttgggttcttgctgatccagtatgtgggtacttcctgaaaaactgcacaatc
cggggtaatctcagtgacccctctgacatgatagtactctgtcaaaagaggaacctagaa
gtcatacctatagacattccacagaatgtaagtgttttaaatgtggccatgaataacatt
tccaaaattggaaagttggattttaaaggcctgtcaaacctcaaaaatctgaacatgtca
agaaaccagatctctcaagtggacgatgggtctcttggacacctagaggctcttcaggaa
ctgggtttggctcataacagactcacaaccctgtcagaccacatgtttcagggcctggtc
aacctctccctgctacatctggacaacaacctaatctcaaccatcgggtcctcatccttt
caacttctctccagtttgaagacagtgaatttaaccaataacaacctttataatatgaag
gacgttcagccaattgtacaattaccacacttacaggagttgtacattgggagcaacaga
ttcacctctttccagtcacaggaaatatcaaacacttctatagagctgaggctgttggat
ttatccaggaatccattgggaatcttcaggatcacggcagatgttcttccttaccttgag
gtgttagacatcgcctactgtggccaacttggccgcatggaatgggatgtgctggacagg
tcttttttgagcaacgtcaaacgtctgaacctgagcgggattgagatgtctttcgagagg
atggttatggttctgcagactgtcaactcctcattagtccatctgagactgtatgacatt
ggtgaagagagggtcaaggctctcactgatattgcctgctatatacctacacttagcttg
ctccgactgcatcataacaacataagtgttctctctaaggaatttctgcagtcatgtaaa
cagttgaccgaaatggacgtatgtaataataatattaatcagctgtctgagttttcattc
agatcaatggagcaattaagtactttgaaactgggccacaacagcctttcttccgtgcca
aatgccacaagaaatctacccacactgaagatcttggatctgagcttcaatatcatcaat
aaactaggctgctcagatttcgccaatcttacaggactcacacaactctttcttttccac
aatcaaatctccaaacttccaggatgtgtattccaggatttgaaagaattaaggatcctt
aaagtgggatcaaacaaaatcctgaccttgaatgatgccttcatgaggggtttgtacaaa
ctagaatatttgtcgatgtcatacaataagctgagctcaatctctaaaggaggctttaaa
ggcttagcatcactcaagactctgcttttatttgacaatcagattgctagtcttgaagat
ggagcctttgagggattggtgaatcttacagaacttagactcgagtcaaataagatcact
caaatagacataagaaatactgtgctcacgggacttccacgcttcagaactcttgatata
tcctgtaatttcatcacatatgtaaatgatgatcaattagaccccccacccttctctcat
ctgacatctctggagaacctgcacatccatagtcagcgtcacaagggattgtctcatcta
cctagcaacttccttgaaggtctgaaatctttattggcattcaaggcagggaatctcaat
attaaggacctgcacccaaacacatttattcacacaccccggttgtggttccttgatatc
agtaagaatgcgttcacagccctcaagccagagctgtttcacccaaccccaaggctcaac
agaatgtacctgtccaaaacccgacttcagtccttagatttcctcataggagcaaacctc
agtagagtcactttcttgcaggtgagcaagaacgatataacagtagtcaatgagagagtg
ttgcgttctctccctgccttgacatacctggacatgcaagataatgctttcacctgtggc
tgcagcgatgcttggtttgtccattggatggagaacaacaaccaaacacaagttgttggt
gcaggagaatttacctgcaactatcctgccgatctaaaggacaccaagctgttggatgtt
gagcttcagttctgtacagtacacttaggactttactactacatctctaccacttgtctg
gtcctcctcaccctggtagcatcctttgcctaccacttcctgaaatggcaggtaatttac
ggctattacctcttcctggctttcctctatgacaccaagcaaaggaataagctcactcct
catggctgtcagtatgatgccttcatctcctacaatgcccatgatgagccctgggccctg
agggagcttctgccagagctggagggagagcagggctggaagctgtgtctccaccaccgg
gacttccagccaggaaaaccaatcatagacaacattatggaaggcatctacggaagccgc
aagaccatctgtgtgatcagccgccgctacctggagagtgagtggtgctcccgggagatc
caggtggccagcttccggctctttgatgagcagaaggacgtcctgattctggtgttcctg
gaggagatccctacccaccagctgtcaccctaccaccggatgaggaagctagtgaagaga
cgcacatatctgagctggcccagagctggggagcaaactggggtcttctggcagcaacta
cggctggctttagagaccaaggacggccctgctgaggaaaatcccatcctctctggtgtg
caggctctgtga
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