Salmo trutta (river trout): 115196269
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Entry
115196269 CDS
T08542
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115196269
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115196269
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115196269
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115196269
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115196269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
115196269
NCBI-ProteinID:
XP_029612792
Ensembl:
ENSSTUG00000025487
LinkDB
All DBs
Position
6:53110171..53133824
Genome browser
AA seq
2595 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQMVSPNPSSTEPSPVSPPAAEEEQGQGD
SAPSLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEA
CQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLELLA
TATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQ
TLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELK
KEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNAL
NEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEK
ILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKES
WTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKI
LDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQEV
QERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLDPD
INKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYL
WRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCVLD
GDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFPN
QGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQLN
LKDKALITAKLTQVSATVPSSPDSSSDSSTGSPSNHGNHFSEGPNPEVEGCLPGVIMSLH
LRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNSTVENLRAICLDHAKLGENSLSP
TLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRNN
FLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPINQATHDQ
ALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNSQNFFQASKYIPDLCVIRAVQ
KIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALEIMTLCFALLPTAL
DTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHTGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRTGETGVE
ETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGEF
PTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGDEKQENE
TNADGTARDEVFAYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHPSMLSKVLGGSFADQKICRD
CPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLI
KKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQM
IMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDGGAGGNANSGQKERWYK
FDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFYERMDPA
GGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFMHSRMQYSLEYFQF
VKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPAGDWYD
ALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHFSLADGP
CPAPASSPEGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAE
KTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQSSINGN
PALANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQ
FSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDT
IQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPYT
GNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVRKEPDDQEATEDHD
SSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPPQRAQESWESTTEE
VGPVAPPPAVQTTKE
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacccgtggctcccctgtggggggcaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggcccagatggtgtcccccaacccgtcg
tccacggagccgtctcctgtgagcccaccggcggcggaggaggagcagggccaaggagac
tctgccccttctctggaggaggaggagcctgccttccctcacactgacctggccaagctg
gacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaattagaa
gttctacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgtgaggcg
tgccagaggtttttcagggacggcctgaccatctccttcactaagatcctcacagacgag
gctgtcagcgggtggaagtttgagatccataggtgtatcatcaccaacacacaccggctg
gtggagctgtgtgtgaccaagctccctcaggactggttccccttactggagctactggcc
acagccaccaacccccactgcaagttccacatctacaacggcacgcggccctctgagacc
attcccgccggggccacgctggccgacgacgagctcttcgcccgcccacccgaccctcgc
tcacccaagggctggttggtggacctgattaataagtttggcacgctgaacgggtttcag
actctacacgaccgcttcatgagcggacaggcactcaacgtacagatcatcgctgccctc
attaagccgttcggccagtgctatgagttcctgaccttgcacacagtgaagaagtacttc
ctgccagtgatcgagatggttcctcagttcctggagaacctgacggacgaggagctgaag
aaggaggccaagaacgaggccaagaacgatgccctgtccatgatcatcaagtctctgaag
aacctggcctccagggtgcccggtcaggaggagaccgtcaagaacttggagatatttagg
ttgaaaatgatccttaggttattgcagatttcctcgttcaacggtaaaatgaacgccctg
aacgaggtcaacaaggtcatctccagcgtgtcctactacacgcatcggcatggcaacccc
gaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaaccacatc
ctgtccattgtgctgagggacagcctccaccagcctcagtacgtagagaaactagagaag
atactccgcttcgtcatcaaggagaaagccctcaccatgcaggacctggacaacatctgg
gcagcgcaggctggtaagcacgaagctatagtgaagaacgtccatgaccttctggccaaa
ctggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaaggagagt
tggacgaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcg
gaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaacctggct
cacagtgacgacgtccccgtggacatcatggaccaggccctcagtgcacacatcaagata
ctggactacagctgctctcaggacagagacacccagaagatccagtggatagaccgcttc
atcgaggagctgcgcaccaatgacaagtgggtcatacctgccctgaagcagatcagagag
atctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagtcctcat
gtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtcactctg
gtggctgagaacctgtctgcctacatggagaccatgagacccttctccaaagctgaacat
gcagactttgaccctcagacagtcagagtgggcagtcgctacagtcatgttcaggaggtc
caggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggctatgtgct
cctcaggccaagcagatctggaggtgtctggctgagagcgccgtcttcctgtgtgaccgg
gaggcgtgcttcaaatggtattctaagctaatgggagatgagccagacttggacccggac
atcaacaaggacttctttgagaacaatgttttgcagctggacccgtccctgctcacggag
aatggcatgaagtgcttcgagaggttcttcaaagccgtcaactgccgcgagggcaaactg
gtggccaaacgcagggcctacatgatggatgacctggaactcataggactggactacctc
tggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctgctgaag
gagatctacaccaacctgggacccaagctgcaggtcaaccaggtggagatccatgaggac
ttcatccagttgtgttttgaccgtctgaaggcgtcgtacgacacgctgtgtgtcctggac
ggggacaaggacagcatcaactgtgcccgacaggaggccattcgcatggttcgcgtgctc
actgtgctcaaggagtacatcaacgagtgtgacagcgactaccacgaggagaggtccata
ctgcccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcgtttccctaac
cagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatcggctcg
gtgcgccgcggcatcctcacacgcatcaaggccaacgccacgcacaccaagatagagctc
ttcattggcggggaggttgtcgacccggcggatgacaggaagctgattggacagctcaac
ctcaaggacaaagcattgatcacagccaagctgacccaggtgagtgccaccgtgccctcc
agtcctgacagctcctcggactcctccaccggctcgcccagtaaccacggcaaccacttc
agcgaagggcccaacccagaggtggagggctgcctgcctggagtgatcatgtctctccac
ctgcgctacatctcgttcctgtggcaggtcgcagacctgggctgtaccctcaacatgcct
ctgctgcgagacggagccaggctcctcatgaagcttatgcctccagacaacagtaccgtg
gagaacctgcgtgctatctgtctggatcatgccaagctgggagagaacagcctgagcccc
acactggactcccgcttctttggcccctcgccctcacaagtcctctacctcactgaggtg
gtgtatgcgttgctgatgccggccagcggcacccttggcgaggacgccagcgacttccag
tacaacttcttgaagagcggcggcctcccgctcgttctgagcatgctcaccaggaacaac
ttcctgccgtcggccgacatggagacgcgacggggggcgtacctcaatgccctgaagatc
gccaagctgctgctgaccgccgtggggttcggacacgtcaaagctgtggccgaggcctgc
cagcccgtagtggaggggaccagccccgcatcaccgatcaaccaggcgacccacgaccag
gccctggtcctccagagtgctctacagaatatccccaaccccgcctctgagtgcatgctc
cgcaacgtggccatacgactggcccaacagatctctgacgagtctctgcccccgaactcc
cagaacttcttccaagcatccaagtacatcccagacctctgtgtgatccgggcggtgcag
aagatcgtgtgggcttcaggctgtggcacggtacagctggtcttcagctctaatgaagag
atcagtcagatctatgagaagacgaacgcgggtaaggagccggacggggaggatgagatg
gtgtgctgtgaggcgctggagatcatgaccctgtgttttgccctgctgcccaccgctctg
gacacgctcagtaaggagaaggcctggcagacttacatcatagacctgctactgcactgc
cacagcaagtcagttcgtcagatggctcaggagcagttcttcctcatggccactaggtgc
tgtatgggacacagacccctcctcttcttcatcaccctcctcttcaccgtcttagggagc
acggcaaaggagagggcgaagcacacaggggactactttacgctgctgaggcacctgctg
aactacgcctacaacagcaacatcaacctgcccaacgctgaggcgctgctcaacaacgag
atcgactggctcaagaagatcagggatgaggtgaagcggacgggagagacgggggtggag
gagaccattctagaaggtcacctgggggtcaccaaggagctgctggccttccagacacca
gagaagaagtactacattggctgtgagaagggcggggccaacctcataaaggagttgata
gatgacttcatcttcccggcgtctaacgtgtacctgcagtacatgaagagtggggagttc
cctacggagcaggccatccctgtctgtagcagccccgcctccatcaacgccggcttcgag
ttgctggtggctctgccggtcggctgtgtccggaacctcaagcagatcgttgatacactc
acagatatgtactacctaggttgtgaggctctgacagagtgggaatacctccccccagtg
gggccgcggcccaccaaaggctttgtggggctgaagaacgcgggggccacctgctacatg
aactcggtcatccagcagctctacatgatcccgcccatccgtaacggcgtcctggccgtg
gagggcaccggcaccgacgtggacgatgaactgtccggggacgagaagcaggagaacgag
actaatgcagacggaacggcgcgggacgaggtgttcgcctaccaacaccagtttgacgac
aagccctcgctgagtaagtcggaggacaggaaggaatacaacatcggggtgctacgccac
ctacaggtcatctttggtcacctggcctcctcccgactgcagtactacgtaccccgaggc
ttctggaaacagttcaggttatggggtgagccggtgaatctgcgagagcagcatgatgcc
ctggagttcttcaactctttagtggacagtctggacgaggctctgaaggccatgggccac
ccctccatgctcagcaaggtgctgggaggctcctttgccgaccagaaaatctgccgtgac
tgcccacacaggtatgagtgtgaggagtcattcaccacgttgaacgtggacatcaggaac
caccagaacctgctggactccatggagcagtatgtcaaaggagacctgctggagggagcc
aacgcataccactgtgagaagtgcaacaagaaggtggacacggtgaagcgtctgctgata
aagaagcttcctccggtactggccatccagctgaagaggtttgactacgactgggagagg
gagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatggagccc
tacactgtggccggggtggccaagctggagggagacgacggaaacccggagagccagatg
atcatgcagaacgaaccatcggaacccgacccaccaggctgcagttctaagtaccgcctg
gtgggggtgctggtgcattcgggccaggccagcggcggccactactactcctatatcagc
cagcgagacggcggcgccggcggtaacgccaacagcgggcagaaggagcgctggtacaag
tttgacgacggcgacgtgacggagtgcaagatggacgacgacgaggagatgaagagccag
tgcttcgggggggagtacatgggagaggtgtttgaccacatgatgaagaagatgtcctac
aggaggcagaagagatggtggaacgcctacatcctgttctatgagaggatggacccggca
gggggaggggccgcagtggaggcagacggagagttggccaggtgcatctcagagctgact
gtgtctcccactacaccacgacaggtgacgatgccgggggccattgaatgcagtgtgagg
aagcagaacgtccagttcatgcacagccgcatgcagtacagcttggagtactttcagttc
gtcaagaagctgctgacctgcaacagcgtctacctcaaccctcccccaggtcaggaccac
ctgctgccagaggcagaggagatagccatgatcagcatccagctagcagctaggttcctc
ttcagcaccgggttccacaccaagaaagtagtccgggggcccgctggtgactggtatgac
gccctgtgcatcctgctacgccacagtaagaacgtccgctgctggtttgcccacaatgtt
ctgtttgcgtaccccacgcgcttctctgagtacctgctggagtgtcccagtgctgaggtc
cggggggccttcgccaaactcatcgtcttcatcgcccacttctccctggcggacgggcca
tgccccgcccccgccagctcccctgaggggtccacacagggctgtgataacctgagtctg
agtgatcacttgttgagggctgtgttgaacctgctcaggagagaggtgtcagagcacggc
cgacacctgcagcagtacttcaacctcttcgtcatgtacgccaacctgggtctggcagag
aagacccagttgttgaagctgagtgtccctgctaccttcatgctggtggctctagacgag
gggcctggccctcccataaagtaccagtatgcagaactgaccaagctctacgctgtggtc
tcccagctactgcgctgctgtgatgtctcaacacgcatgcagtcctccatcaatggtaac
ccggccctggccaacccatacggagacgccaacctgaccacccccatcatgcccctgcaa
cagctggtgtcagagatcctcttcgttaggaccagctacgtgaagaagatcatcgaggac
tgcagcaactctgaggagactgtcaagctgctgcgcttcagctgctgggaaaacccccag
ttctcctctaccgtgctgtctgagctgctctggcaggtggcgtactcctacacgtacgag
ctgaggccttatctggacctgctgctgcagatactgctgatagaggactcctggcagacc
cacaggatccacaacgtgctgaagggtataccagacgacagggacggcctgtttgacacc
attcagcgctctaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtg
gccctgttcagcaactgtactgtggcctaccagatactacagagtaacggggacctgaag
cgtaagtggacgtgggcggtggagtggctgggggacgagctggagaggaggccctacaca
gggaacccccagtacacctacaacaactggtctccccctgtccagagcaatgagacctcc
aatgggtacttcctggagcgctcgcattccgcacgcatgaccctggccaaggcctgcgaa
ctttgccccgaggaggtacggaaggagccagatgatcaggaggcaacagaagatcatgac
tcctcccctcccgaggacacagcgctgtacccccataaccctgctcctgccacgcagttt
cagcagcagaacaaccacccccacgcccagccctatacgggtccggctgcccaacacatg
aacacgccccagcggcccccacagagagcacaggagagctgggagagcaccacagaggag
gtggggcctgtggcacccccgcccgctgtccagacgacaaaagagtaa
DBGET
integrated database retrieval system
