Salmo trutta (river trout): 115196321
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Entry
115196321 CDS
T08542
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115196321
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
115196321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
Ig_4
C2-set_2
Ig_6
C1-set
BiPBP_C
VEGFR-1-like_Ig-like
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
115196321
NCBI-ProteinID:
XP_029612906
LinkDB
All DBs
Position
6:54353336..54373691
Genome browser
AA seq
2286 aa
AA seq
DB search
MDIFGGAPRVLGYSRPVVAQCGTDAVLQCKIGGDPRPEVVWEKKNVQILSEGRYRLSEEG
KAYFLHITGVRLEDAGQYICKASNSVGETCAPATLKVEGNSQERQGTQKQTEVNGVQQTR
LENGELGGQWNGEFRRQQSSELEGQQNQNGEYRQQENREYGGQQNGEYRQQENREYGGQQ
NGEVEQRNGEVDQQSGEVDQQSGEVDQQSGEVEKENGEGSEREKKKQRYEGEHLLSDDRP
HFLIKPLSLRVDRGEDAAFSCKLSGNPLPQVVWEKDGKKLSDIFESAHFNVSSQDGGWFQ
LKIFRTRMPDGGVYTCRAHNNQGGALAGAVLLVELVPERQESGASTSNGCCNGQISPRSI
RHRMGRHGLSRQPDEPNLNSSNVKKFAVSEGKHAKFRCFVTGKPKPEIIWKKDGAPLEAG
RRHLLFEDREGYFTLKVMYCKHQDTGLYVCAASNALGHTLSSVYLTVKAPAVRFRRSLQD
VEVRERGMAVLECEVPNEGIPTAWYLEDQRLQPGGKYGIEQKGTRRRLTIQDVGADDDGV
YLCEMPDGGKSIAELAVKGTIVKKLPRKLDVLEGENAVFCVEVEEENMDVHWFKDGLKLR
ESHQTILKSFGKTHILVFVNVCHGDTGVVTFVVGRSKTSSRLRVKAARHSPPICPVGVEM
DVDRPNSVLLSWEPAPTSQTTTRSVYVLERQEVGSQDWLRCATCDTATSAEVMGDSVPCE
GDYRFRVCCINKYGRSGHVEFPKVVHLVPGPKISTPLQGCEVTEGEDALFSIDLSVMVTG
TWFLNSTQLQDSQRYSIQQAKTQHSLVIHSTKVEDHEAELTFIANGVRDSAVLQVQAAVV
KFSPMSESDSNKRVETGDPVVLYCEVSNPSARVGWFKDGVELQVTDGLNIQSEGNMRRIV
IQSAEFTDSGVYTCETMGDIIKFNVEVEGPPVQFSEVPEEELQKSAMELDPVVLTCEVSR
EDANATWYKDGVEVQASDNITIQTEGTMRRLIIRCAETSDAGTYSCQSGDNSLSFTVNIK
EPPVMIVEPKEDVVMEGHISEQVVLQCELSRSSGKVHWFKDGLQVLETENVQLTSEGPYR
RLTVLCGSAEDSGEYVCDTDGDSVFFQVTITELPVRIVSPTESELELTSLTSERLELSCE
ISQPDAQVRWYRDGLEVEESASFFLEVQGAHRTLVIPTTTVEDTGEYVCDTEDDSVTWLV
TITEPPVKLARSETMSDVMDCFSGDPIVLEIEVSRFNAEVIWMKDGGEVEESSDVTITDD
GLIRRLTIRTSAPRDSGKYTCLASDDLIDFQVKVSEPPVKIVNRSEVKTEVKSLPSDDIE
LECELSRANAVAKWYKDGRRLNEDERFCEEEEGAFRSLVILNAELEDCGDYFLDAGDDNI
TFHVTVQEPPVTILGNSEDADYQEMVAGDDLILACEVSRANAPVQWYCNDRQLTSDDRTY
IESYGTLRKLILSDILPSDSGKYMCDAIDDKMVTMVKIQDSPVTFVDKQAVNIITGYEAE
SVTLMGVVSKENAPVRWLKDWTPVIGDRFHTGVDGATRFLTINPLRRSDSGEYTVDANTD
EMHFSLLVKEMRVKFAKPLHDTVAHADGMVTIRCEVCKPKADVQWLKDGVEIVPSRRFTI
RADGVERSLTIHRLTREDTGEYACESKDDRTAARLRVEMPRVVEFLTELHNTMVLEGEDA
TFKCVVSPEDVQLVWGMDGELVVMGDRFQATQNGLCHTMVIKSCQILDSSKITVEAEGNV
SKATLKVQEAQVTFTKKMEAVMAEEYGDATMETEVSLDTGEVQWMRQGVVIQPGPRHTLG
QSGRKRSLTICNLNLSDRGTYRCETLHDRTQVKLNVEPRKIAIRKGLAETDTFERETASF
EVELSHTDVEGVWQKDGIRVKPSNHWRVSCNGLVHGLTLSNLTLEDTGTIVFSAEGVRTS
ARLTVKETPVTIMKKLVDMRLEQGSPATLECELSRQNVEVRWLKNGTELKPGKTQYRIYS
MGRKRFCQLLQCSLSDVGTYTCDVGDVNTSCNLEVYVPELEVLHGLEDLYVQEDQNAVFM
CEVSMEDVTGEWYKDGHKIRPTSTIKIRTEGTKHFLLMCNVKAEDSGEIRFVTKQTESTA
YLEVEEAPVSIVKPLRDRTALEKHRVILDCTVSTPRCDLTWYRDKAELVSSDRLEIHSDG
CYHKLTIHEATVEDEGTYSIEVGEHTSTAQLLVEAQSLVIETELEDVAVTAPDQACFQCE
VSVAISRPPVWTLNGETIQSSPDVRLENHGTVHKLNLKQTRPDMSGTVTFAMGKAKSSAK
LNVMWK
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcggtggtgccccccgtgtactgggctactcgcgccccgtggtggcacag
tgtggcacggacgccgtcctgcaatgcaagatcggcggcgaccctcgtcctgaggtggtc
tgggagaagaagaatgtacagatcctgtcagagggacgctacaggctgtcggaggagggc
aaggcctacttcctacacatcactggggtcaggctggaggacgcaggccagtatatctgc
aaggccagtaacagcgtgggtgagacgtgcgcccctgccacactgaaggtggaggggaac
agtcaggagcggcaagggacacagaaacagacagaggtcaatggggtgcagcaaaccagg
ctggagaatggagagttaggggggcaatggaatggggagtttagaaggcaacagagcagc
gagttggaggggcaacagaaccagaatggggaatatagacagcaagagaacagggagtat
ggagggcaacagaatggggaatatagacagcaagagaacagggagtatggagggcaacag
aatggggaggtagagcagaggaatggagaggtagaccaacagagcggagaggtagaccaa
cagagcggagaggtagaccaacagagcggagaggtagagaaggaaaatggagaggggagt
gagcgggagaaaaagaagcagcgctatgaaggggagcacctgctgtcagacgacagacct
cacttcctcatcaagcccctctccctgagggtggaccgaggcgaggacgcagccttctcc
tgtaagctgtcgggcaaccctctgccccaggtggtgtgggagaaggacgggaagaagctg
agcgacatcttcgagagcgcccacttcaacgtcagcagccaggacggaggctggttccag
ctgaagatcttccggacgcggatgcccgacgggggtgtctatacctgcagagctcataac
aatcaaggaggggctctggcgggcgcagtgctgcttgtggagctcgtcccggaacggcag
gagagcggggcgtccacgtcaaatgggtgctgcaacgggcagatatcacctcgtagtata
aggcacaggatggggagacacggtttgtccagacagccggacgagcccaatctgaactcg
tccaatgtgaagaaatttgcggtgtcggaggggaaacatgctaagttccgctgcttcgtg
acagggaaacctaagcctgagatcatctggaagaaagacggagcgcccctagaggctggg
aggcgtcaccttctgtttgaggacagagagggttacttcacgctcaaagtgatgtactgt
aaacatcaggacacagggctgtacgtgtgcgctgcgtccaacgctctgggacacaccctc
agctctgtttacctgactgtcaaagctccagcggtgcggttcaggcggtcactgcaagac
gtggaggtgagagagagaggcatggccgtgttggagtgtgaggtacctaatgagggcatc
cctactgcctggtacctggaggaccagagactgcagccaggaggtaaatacggcatagag
cagaaaggaaccaggcgcaggctcactatccaagatgtaggagcggacgacgatggggtc
tatctctgtgagatgcctgatggagggaagagtatcgctgagctggccgtcaaaggcaca
attgttaaaaaacttcctcgaaaactagacgtgttggagggggagaacgcagtgttctgt
gtggaggtagaggaggagaacatggatgtccactggttcaaagatggcctgaagctacgc
gagagccaccagactatcctcaagtcatttggtaaaacccacatcctggtgttcgtcaac
gtctgccacggggacactggggtcgtgaccttcgttgtgggaagatccaagacctcttcc
cggctcagagtcaaagctgccagacacagccctcccatctgtccagtgggggtggagatg
gatgtggacaggcccaacagcgtgctcctctcctgggagccggcccccaccagccagacc
accacgcgctccgtctatgtcctggagagacaggaggtgggatcacaggactggctgagg
tgtgcgacctgcgacacggcgacctccgcagaggtcatgggcgacagcgtaccgtgcgag
ggcgattaccgcttccgcgtctgctgcatcaataagtatggtcgtagtggacacgtggag
ttccctaaagtcgtccatcttgtgccaggccccaagatcagtacccctctccagggctgt
gaggtgacggagggggaggacgccctgttctccatcgatctgtctgtgatggtgacgggc
acctggttcctgaacagcacccagctacaggacagccaacgctactctatccaacaggcc
aagacacagcactccctggtcatccacagcaccaaggtggaagaccacgaggcagagctc
accttcatcgccaacggagtcagagactcagcggttctccaggttcaagctgcggtggtg
aagttcagcccaatgtcagagtctgacagtaacaagagggtggagactggtgaccctgtg
gtcctgtactgtgaggtgtccaacccctcagccagggtgggctggttcaaggatggggtg
gagctacaggtgacagacggcctcaacatccaatcagaaggcaacatgaggaggatcgtt
atccaatcggctgagttcaccgactctggcgtgtacacatgcgagacgatgggtgatatc
atcaaattcaacgtggaggttgaaggtccccctgtgcagttcagtgaggtccctgaggag
gagctccagaagtctgccatggagctggatcctgtggtgctcacctgtgaggtttccaga
gaggacgccaacgctacctggtataaggatggggttgaggtccaggccagtgataacatc
accatacaaacagagggcaccatgaggagactgatcatccgttgtgctgagacctcagac
gcaggaacctacagctgtcaatcaggagacaacagcctctcattcactgtcaacatcaaa
gagcctccagtgatgatcgtggagcccaaggaagacgtggttatggagggtcatatctct
gagcaggtggtgctgcagtgtgagctgtcccgctccagcggtaaggtccactggtttaag
gacggccttcaggtcctggagacggagaacgtccagctgacgtccgagggaccgtacagg
aggctgactgtcctctgcggctcggcagaagattccggagagtacgtctgcgacacggat
ggagactctgtgttcttccaggtcaccatcacagagcttccggtgcgaatcgtctccccc
actgagtctgagctggagctgaccagcctgacctctgagaggctggagctcagctgtgag
atctcccagcccgatgcccaggtacggtggtaccgagacgggctggaggtggaggagagt
gcctctttcttcctggaggtccagggagcccacaggacactggtcatccccacgaccact
gtggaggacacaggagagtatgtgtgtgacacagaggatgactcggtcacatggctggtc
actattacagagcctcctgtgaagctggcccgctctgaaacaatgtctgacgtaatggac
tgtttctctggagaccccattgtcctggagatcgaggtgtcacggttcaacgctgaggtg
atctggatgaaggatggaggagaggtggaggagagcagtgatgtcaccatcactgacgac
ggactcatccgccgcctcaccatccgcacatccgccccgagggactctgggaaatacacc
tgtcttgcctcagatgacctcatcgacttccaggtcaaggtgtcagagcccccagtgaag
atcgtgaataggtcagaagtcaagacagaggtcaagtccctgccctctgatgacatcgag
ttggagtgtgaactctccagggccaatgccgtcgctaagtggtacaaagatggccgccgg
ttaaacgaggacgagaggttctgtgaggaggaagaaggggcgttccggtccctggtgatc
cttaacgctgagctggaagattgcggagactacttccttgatgccggagatgacaacatc
accttccatgtcactgtgcaagagcctccagtgaccatcctggggaactctgaggacgca
gactaccaggagatggttgccggggacgacctgatcctggcctgtgaggtgtcccgggcc
aatgcccctgtccagtggtactgtaacgacagacagctgactagcgatgaccggacctac
atcgagagctacggcacgctgaggaaactcatcctctctgacatcctgccctcagactct
gggaagtacatgtgtgatgctatcgatgacaagatggtcaccatggtgaagatccaagac
tcccctgtcaccttcgtagacaaacaggcagtgaacatcatcacgggctacgaggcagag
agcgtgacgctgatgggggttgtgtctaaggagaacgctcccgttcgctggctcaaggac
tggacgcccgtcataggggaccgcttccacacgggggtcgacggcgccacccggttcctc
accattaacccgctgagacggtcggacagcggagagtacacagtagacgccaacacagac
gagatgcacttcagtctgctagtcaaagagatgagggtgaagtttgccaagcctctccac
gacaccgtggcccatgcggacggcatggtgaccatacgctgtgaggtgtgtaagcccaag
gcagatgtccagtggctgaaggatggcgtggagatcgtccccagccggaggttcaccatc
cgggccgacggcgtggaacgcagcctgaccatccacaggctgaccagggaggacacgggg
gagtacgcctgcgagtccaaggacgaccgcaccgccgccaggctcagagtcgagatgccc
cgcgtggtagagttcttgacagagctccacaacaccatggtgttagagggagaggacgcc
accttcaagtgtgtggtgtcgccagaggacgtgcagctggtgtgggggatggacggcgag
cttgtcgtcatgggtgaccgtttccaggcaacgcagaacggcctgtgtcacaccatggtg
atcaagagctgtcagattctggactcctctaagatcacagtggaggctgaggggaacgtg
tctaaagccaccctcaaagtacaggaagctcaggtgaccttcactaagaagatggaggcg
gtgatggccgaggagtacggagacgctaccatggaaacggaggtcagtctggacacgggc
gaggtccagtggatgaggcagggcgtggtcatccagccaggaccccgacacaccctgggc
cagagtggacgcaaacgcagcctgaccatctgcaacctcaacctctctgaccgcggaacc
taccgctgtgaaaccctgcacgaccgcacgcaggtcaaactcaacgtggagccccgtaag
atcgccatccgtaagggtctggcggagacggacacgtttgagcgggagacggcctccttc
gaggtggagctgtctcacactgacgtggagggcgtctggcagaaggacggcatccgggtc
aaacccagcaaccactggcgggtgagctgcaacgggctggtccacggcctcaccctgtcc
aaccttaccctggaggacacgggtaccatcgtcttctctgcggagggagtccggacctct
gccaggctcactgtcaaggagactccagtgactatcatgaagaagctggtagacatgaga
ctggagcagggctctcctgccacattggagtgtgagctgtccagacagaacgtggaggtc
aggtggctgaagaatgggacagagctgaagccagggaagacccagtaccgtatttactcc
atggggaggaagaggttctgtcagctgctacagtgtagcctctctgatgtaggcacctac
acctgtgacgtaggagacgtcaatacatcctgtaacctggaggtctatgtgcctgaactg
gaggtgctacatgggctggaggacctgtatgtccaggaggaccagaatgctgtgttcatg
tgtgaggtgtccatggaggacgtgactggggagtggtacaaggatggacacaagatacga
cccactagcaccatcaagatacgcacagaggggaccaaacacttccttctcatgtgcaac
gttaaagctgaggattctggggagatccgctttgtgaccaaacagacagaatcaacagcc
tacctcgaggtggaagaggcccccgtgtccatcgtgaagcctctgagagaccgcacggct
ctggagaagcaccgcgtgattctggactgcaccgtgtccacgccgcgctgtgacctcaca
tggtacagagacaaggcagagctggtgtcttctgataggctagagatccacagtgacggc
tgctaccataaactgaccatccacgaggcgactgtagaggacgagggtacctatagtata
gaggttggggagcacacgtccacagcccaactcctggtggaagcccagtccctggtgata
gagacagagctggaggatgtggcggtgacagctcctgaccaggcctgtttccagtgtgag
gtgtccgtggccatcagcaggcccccagtctggactctgaacggagagaccatccagtcc
agccctgatgtccgcttagagaaccacggaaccgtccacaaactgaatctgaaacagacc
agaccagacatgagcgggacggttaccttcgccatgggaaaggccaagagcagcgccaaa
ctgaacgtgatgtggaagtag
DBGET
integrated database retrieval system
