Salmo trutta (river trout): 115196377
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Entry
115196377 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115196377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115196377
03021 Transcription machinery [BR:
stru03021
]
115196377
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115196377
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115196377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115196377
NCBI-ProteinID:
XP_029613008
LinkDB
All DBs
Position
6:56673800..56686130
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AA seq
618 aa
AA seq
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MPDSIINLSVSSKGNMENGDIVKGVLTNGRDSQKQTVMSLTNAQSQALLQQLTLSPAQQQ
LFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPLSQPIHITPLQQQG
LQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLTQLPQSQANLLQTP
TITIAPQVAAPTRTITATPGQLLIHSQTPPPKGLGTPTLEDASDLEELEIFSKAFKQRRI
RLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENVSSES
SPSLSPLGSGHGSPSLASDLNSRRRKKRTSIDTNIRVALEKSFLQQNQKPSSDEISLIAD
QLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNTVPQTTVTVTPSLP
VTSFSLTDRTLASATGNTASVISSTPTVPSMSLTPSSSVTTMSQPAVTMTQAGQMLYSNG
GGLAAMAAAAAGISPSLMPSSQFNTGGALLNLTTAGFGGALATIQGVLSALASSGSFPIT
TLDGNGNLLFANTSLSGSSPSMVNTPLFLNPQSLSLLGSNPVSFIPASALSLQLTAGTNT
ITTATTPVNTIVRASKAQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccagactcgataatcaacctgtcagtatccagtaaaggcaacatggagaacggggac
atagtcaaaggcgtgctgaccaatggccgggactctcagaagcagactgtcatgtccctc
accaatgcacagtcacaggctctgctgcaacagttgaccttgtctccagcgcagcagcag
ctgtttctccagcaggctcaggcccagctccttgcagcagccgttcagcagcactccgcc
agccaggcccagaacagcagcaccacgggggccgccatctctgcctccgcagccaccccc
atcaccacccaactcccactgtcccagcctatacacatcactcctctccagcagcagggc
ctgcagcagtttgtgttggtccagccaggtcattccatggccacccagcttcagcctcag
ttcttcatctcccagactccacagggacagcccagtatgtttcagtatcataatctcctg
caagcccaaaatcttctcactcaactacctcagagccaagccaacctcctacagactcca
actatcacaatcgctccacaggtggccgctcccacgcggaccataactgccacccccggc
cagctcctcatccacagccagaccccgccccctaagggtctgggcacgcccactctggag
gacgccagtgatctggaagagctggagattttctccaaggccttcaaacagaggaggatc
agactgggcttcacacagggtgacgtggggctggccatggggaagctgtatggtaatgac
ttcagccagaccaccatctcccgctttgaagcactcaacctgagcttcaagaacatgtgc
aagctgaaaccgctgctggagaagtggctcaacgacgcagagaatgtgagctcagagtcc
agccccagcctcagtcccctgggctctggtcacgggtcacccagcctggcatctgacctc
aatagccggcgccgcaagaagaggaccagcatcgacaccaatatccgcgtggccctggag
aagagcttcctccagcaaaaccagaagccgtcgtcagacgagatctccctgatagcagac
cagctgaacatggagaaggaggtgatccgggtgtggttctgtaaccgccggcagaaggag
aagaggatcaatcctcccagcagctcagctttccagaagtccatcttctcatcccctact
actgccagcctggtgaacactgtaccccagaccactgtgaccgtcaccccctctctgcct
gtcaccagcttcagcctcacagacaggaccctggcgtcagccaccggcaacacagcatcc
gtcatctccagcacccctacagtcccctctatgtccctcacaccctcctcctccgtgaca
accatgtcacagccagccgttaccatgacgcaggcggggcagatgctctatagcaacggc
gggggtctggctgcaatggcggctgcagcggcgggaatcagcccgagtctcatgccctca
tcgcagttcaacacagggggggcattacttaacctaaccactgcaggttttggaggagcg
ctagccaccatccaaggtgtgttgagtgctctggcctccagcgggtccttccccatcacc
accctggacgggaacgggaacctactatttgccaacaccagcttgtctggctcctccccc
agcatggtgaacacgcccctcttcctgaacccccagagcctgtccttattgggtagtaac
cctgtcagcttcatccctgccagtgccctcagcctgcaactcactgctggcaccaacacc
atcaccacggcaaccacaccagtcaacaccatcgtcagagcctctaaggcccaatga
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