Salmo trutta (river trout): 115196398 Help Entry 115196398         CDS       T08542                                  Name (RefSeq) fibronectin-like isoform X1   KO K05717   fibronectin 1 Organism stru  Salmo trutta (river trout) Pathway stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04810   Regulation of actin cytoskeleton stru04820   Cytoskeleton in muscle cells stru05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115196398  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115196398   09142 Cell motility    04820 Cytoskeleton in muscle cells     115196398    04810 Regulation of actin cytoskeleton     115196398  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     115196398  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:stru04131]     115196398   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115196398    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115196398    04990 Domain-containing proteins not elsewhere classified [BR:stru04990]     115196398 Membrane trafficking [BR:stru04131]  Endoplasmic reticulum (ER) - Golgi transport   Forward pathways    ER-Golgi intermediate compartment (ERGIC) proteins     115196398 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of bladder cancer cells    115196398 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115196398 Domain-containing proteins not elsewhere classified [BR:stru04990]  Fibronectin (FN) domain-containing proteins   Fibronectin type I domain-containing proteins    115196398 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 fn1 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Fn3_Dep-1_2nd fn2 NDNF Interfer-bind FN3_Tor_3rd Arylsulfotran_N Y_Y_Y Cadherin_tail Motif Other DBs NCBI-GeneID:  115196398 NCBI-ProteinID:  XP_029613058 Ensembl:  ENSSTUG00000011785 LinkDB All DBs Position 6:57035355..57064520 Genome browser AA seq 2485 aa AA seqDB search MTGSPVTGLLVALCVSSAVHCMPKNQGKNKRQAQEQVYPELADTVPLAQGCDENGHSYRL NDQWEKAYRGSTLLCTCNGAAGIKCKTKPQGEETCYDKYNDQTYSVGATYERAKDGMMWD CTCIGSARGKISCTIGNRCHEGGRSYKIGDTWRRPHETGDYMLDCVCLGNGKGEWTCKPV SERCYDNAGGASYVVGQTWEKPYQGWMMVDCTCLGEGNGRITCTSRNRCNDQDTKTSYRI GDTWTKTDANRHQLQCLCTGNGRGEWKCERHSATTGTGVSTGTGVGTGTGSTRVTIQTEL HQPSTLPEPPQEGACRTDSGATFHVGMRWIRTQGSKQMLCTCQGTGAVSCEEKEGQSQVY GGNSEGQACVFPFVFMDKTYYSCTSEGRTDGQLWCSTTSDYHRDQQYSFCTEKNSLVSTR GGNSNGALCQFPFLYNGRNYTDCTADGRRDGMRWCGTTTNYEGEQRYGFCPMAAHEEACT TNDGVMYRVGDQWDKRHDVLGHMMQCTCLGNNRGEWSCIAYSQLKDQCIVDGLTYEVSQT FTKRHDQGYMMNCTCYGQGRGRWKCDAIDQCQEPESRVFYQIGETWDKTIHQVLYRCYCY GNGIGEMSCEPQQTFPGGHRPVQVIITEAGKQPDSHPIQWNAPASSHITQYILKWRVKNT RAPWREATIPGNLNSYTIAGLRPGITYEGQLISILRYGRREVTRFDFTTTYGSLGVTSEG ETTQPPPVVDTSESVTEITSSSFIISWVSASDTVSGFRVEYELSEDGAKPQVLDLPRTTT SVSISDLLPGRRYNVNVYEVSPQGEHNLILTTSQTTAPDAPAEHQINQVGETSISISWSK PQAPITGYRLVFTPSVEGSSTELILPDTETSVTLVDLRPGLLYNISIYAVEENQESEPIF VQVNTAGEPAPEEVRSPTDLQFYEVSDVKIIITWTGPPSEVSGYRVTFAPVTPGDTPQRP LQLPMTTNAYAEITHLQPGTLYRFNIYAINGGVESEPLTGERATKPDTPTNLRFSDIGED SVMVVWEAPRASVSGYRLFLSVEGSSPTQKRIPGGQTQFPLRGLRPDTDYTVKLHSEQDN VLSEEVSGIFTTSPKMGNAPRFTTDVTDTSIIISWTPVSRFSFRLSVRPSQGGESPRDVT SDSGSIFVSGLTPGTEYTYSVQPIINGRDRGNPITKNVVTQLSPPTDLSTQSNADTGELT VLWGGANTPDITGYKVTCTPTNGQRGNSLEELVQPVQNQLILENLSPGVEYNVSVYTVKE HLESVPVSTTVTQDVPKLNDLDFVDVTDTTVGLRWTALVNVTAITSYRVTVMASGESLPI IMDTVDSSTGHYTVRGLEPGVDYDISVTTITEEGESEPATRRTQTQTAVPAPTNLNFGGV GPDHMRVSWTVPNVPTPSDITRFVIRFHPDSNDDDVKELNVGGATNTFLLQNLLPNTEYR VSVVCVYEERESAPVTGTQRTTLDSPTGLDFADVLTNSFTIHWLAPGAVITGYRIHYQMT SGGRAKDERLPPTRSHFTLTGLAPETEYSVEVYAVSGNQESLPLTGTQATISDAPTDLEV TSTSPTSITIRWDAPSVTVRYYRITHGQTGGESPAKEFTVPGSQSEATISNLNPGTDYTI TVYAVTGRGDSPASSTPIYISHKTDVEGPTNMDVTDVKDNTITVRWSAAQGPIKGYRVTS VPKNGQGPSFSEVVAPDQTEITFTGLMPTVEYVLSVTALGTDGEPSTPLVENAITAMDRP KALSFSEVDSTSLRITWDSPDGTVTSYSVLYSSPEEGERELRPAPRGTDDTVVLRNLRPG TEYTVKVIALHGRTPSTPLVGTQATAIPAPTNLDISEVGDTSFTVSWRSPSSGLSGYRVV VNPKNNNGPTKEMTIAPDTTRAVVPGLMVATMYTVHVYALKNSVTSRPLEGEVTTLDNIS PPRRVRISDVKDSAITLTWRAKVETITGYLIEAQPLGGSRPTIKKTIPGEQRTYTITGLE PGTSYTIHIYTINGDARSAPFTLTATTAKPAVHSPTNLQFTSLTPNSISFSWEPPATRIT GYYITYEEAGRAQPRELTPRPHAGQNYATISGLRPGTEYIIKIIALQNVQRSTPLVGTAR TQRESLLTLPLPNRPGGYDHLDVPEEKESRVPTVVGNNGLDTLGGQGQNVEYTEYNNQNP QAPYGNGQTPLVFVPLPDAEGRRVPVVSVNVPGGSPFGFPEKDTGIPQEAQTQTTIAWKP YKQSSEYLVSCNPLTHTNEKMFQMRLPGTSTSATLIGLTSGASYNVIVEALKGALKHKIL EEIVTAGNTLTEGSTGTDKDSCYDTFTATYHDVGTEWERMSETGFKLWCRCLGLGSGHFR CDSSKWCHDGGNNYRIGEKWERQEEKGPMMSCTCLGNGKGEFKCEPHESTCYDDGKMYQI GNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGAEVDSSLLQPVRYRDPTNTLRKVNIQC PIECLRPELLADALAEGHIPQNPLE NT seq 7458 nt NT seq  +upstreamnt  +downstreamnt atgactggtagcccagtgacagggctgctggttgcgctgtgcgtaagcagcgcggtacat tgtatgccaaagaaccaagggaaaaacaagagacaagctcaggaacaagtttaccccgaa ctcgcagacacagtacccctggctcaaggctgcgatgagaacggacattcttacagacta aacgatcaatgggagaaggcttaccgtgggagtacactgctttgtacctgcaacggagcg gcagggatcaaatgtaaaacaaaaccccaaggtgaggagacctgctatgacaaatacaac gaccagacgtactctgtgggtgcgacctacgagagggcgaaggacggcatgatgtgggac tgcacctgcatcggttccgcccgcggcaaaatcagctgcacaataggaaaccgctgccac gagggaggcagatcctataaaatcggggacacttggagaaggccccacgagaccggcgac tacatgctggattgcgtctgtctgggaaacggcaagggagagtggacctgcaaacccgtg tcggagcgttgctatgacaacgcgggcggagcgtcctacgtggtggggcagacctgggag aagccgtaccaaggctggatgatggtcgactgcacctgtctgggggagggcaacggacgc atcacctgtacctctaggaatcgttgtaatgaccaggacaccaagacctcctaccgcatc ggagacacatggaccaagacagatgctaacagacaccaactccagtgtctgtgtacagga aatggcagaggagagtggaagtgtgagagacactctgccactactggcacaggtgttagt acaggaacaggtgtaggaacaggtacaggaagtactcgtgtgaccatccagacggagctc caccagccctccaccctccccgaacccccccaggagggggcttgccgcacggactcgggc gccaccttccacgtgggcatgcgctggatcaggacccagggcagcaagcagatgctgtgt acctgccagggtactggggccgtcagctgtgaggagaaggagggccagagccaggtgtac ggtgggaactcagaaggccaggcctgtgtgttcccctttgtgttcatggataagacctac tactcctgtacctcagagggacgtactgatggacagctgtggtgcagcaccacctctgac taccatagagaccagcagtactccttctgtaccgagaagaactccctggtgtcgacccga gggggtaactccaatggtgccctgtgccagttccccttcctctacaacgggcgtaactac actgactgtaccgccgatgggcgccgtgacggcatgaggtggtgcggtaccacaaccaac tacgaaggagagcagcgctacggattctgccccatggctgcccacgaggaggcctgcacc accaacgacggggtcatgtaccgtgtgggagaccagtgggacaaacgccacgatgtcctg ggtcacatgatgcagtgtacctgcttgggcaacaaccgcggagagtggagctgcattgcc tactcccaactcaaagaccagtgcattgtggatgggctgacctacgaggtgagccagacc ttcaccaagcgccatgaccagggctacatgatgaattgcacctgctatggacagggacgc gggcgctggaagtgcgacgccatcgaccagtgccaggagcctgagagcagggtgttctat cagattggagagacctgggacaaaaccatccaccaagtcctctaccgctgctattgctac ggcaacggtatcggtgagatgagctgcgagccacagcagaccttcccaggtggccaccgc ccagtccaggtgattatcacagaggcagggaagcagcctgactcccaccccatccagtgg aacgctcctgcctcctcacacatcacccagtatatcctcaagtggagagtgaaaaacacc cgtgccccctggagagaggccaccatcccaggtaacctgaactcgtacaccatcgctggg ctgcggccaggtattacctatgagggtcagctgatcagcatcctgcgctatggacgccgc gaggtcacccgcttcgacttcaccaccacctacggctccctaggggtgacctctgagggt gagacgacccagcctcctcctgtggtggacacgtctgagtcggtgacagagatcacgtcc agtagcttcatcatctcctgggtgtcagcctccgacaccgtgtcaggcttcagagtggag tatgagctgagtgaggacggagccaaacctcaggtcctggacctgccccgtaccaccacc tctgtgagcatcagtgacctcctgcctggccgtagatacaacgtcaacgtgtatgaggtt tcccctcagggagaacacaacctcatcctcactacctctcagaccacagctcctgatgcc cctgctgaacatcagatcaaccaggtgggagaaacctctatctccatcagctggtccaag ccccaggcccccatcacaggctaccgtttggtcttcaccccgtcagtagagggcagcagc accgagctcatcctcccagacactgagacctccgtgaccctggttgaccttcgacctggc ctgctctacaacatcagcatttacgctgtggaggagaaccaggagagcgagcccatcttc gtccaggtcaacacggccggagagccagcaccagaggaagtccgctccccgaccgacctt cagttctacgaggtgtctgacgtgaaaatcatcatcacctggactggccctcccagcgag gtgtcaggttaccgcgtgaccttcgcccccgttacccccggtgacacgccccagaggccc ctgcagctgcccatgacgaccaacgcgtacgcagagatcacccacctgcagcccggaacc ctgtaccgcttcaacatctacgccatcaacggaggagtggagagcgagccgctgacggga gagagagccaccaagcccgacacccccaccaacctgcgtttcagcgacatcggcgaggac agtgtgatggtggtctgggaggctcccagggctagcgtcagcggttaccgtctgttcctg agcgtggagggatccagccccacccagaagagaatcccaggcggtcagacccagttccct ctgcgaggccttcgccccgacacagactacaccgtcaaactgcactctgagcaggacaac gtgttgagtgaggaagtcagtggcatcttcaccacctcccccaagatgggtaatgcccct cgcttcaccactgatgtgacagacacctccatcatcatctcctggacccctgtcagcagg ttcagcttcaggctgtctgtgaggcccagtcagggaggagagtcacccagggatgtgacc tctgactcaggaagtatctttgtgtcaggcctgacccctgggactgagtacacctacagc gtacagcccattatcaacggacgcgaccgcggcaaccccatcaccaaaaacgttgtcact caactgtctccccccactgacctcagtacgcagtccaacgcggacacgggtgagctgact gtcctgtggggcggcgccaacacgccagacatcacaggctacaaagtgacatgcacccca accaatgggcagcgagggaactccctggaggagttggtccagccggtccagaaccagtta atcctggagaacctgagtccaggagtggagtacaacgtctctgtctacactgtcaaagaa cacctggagagtgtccctgtgtccaccactgtcacccaagacgtgcccaagctaaacgac ctcgactttgtcgacgtcaccgacaccactgtgggcctgcgctggaccgccctggtaaac gttaccgccatcaccagttaccgggtaacggttatggcgtcgggcgagagtttgcccatc atcatggatacggtggactcgtcgacaggccattatacggtgcgcgggctggagcccggg gtggattatgacatcagtgtcactacgataacggaggaaggggagagcgagccggccaca cgcagaacacaaacccagactgccgtccccgcccccaccaacctgaacttcggaggggtg ggccccgatcacatgagggtcagctggaccgtccccaacgtccccacgcccagtgacatc acacgctttgtcatccgattccaccccgacagcaacgacgacgacgtcaaggagctcaac gtgggaggagccaccaacaccttcctgctgcagaacctgctgcccaacacagagtacagg gtgagcgtggtgtgtgtttacgaggagagagagagcgcaccagtcactggcactcagaga acaaccctggactctcccactggcctggactttgctgacgtcctgaccaactccttcacc atccactggctggcccccggcgccgtgatcaccggctaccgtatccattaccagatgacc agcggaggcagggccaaggacgagagactgcccccgaccaggagccacttcaccctgact ggcttggcccccgagacagagtacagtgttgaggtctacgctgtcagcgggaaccaggag agtctgcctctcactggcactcaggctactatctctgacgcccccaccgacctggaagtg acctcaaccagccccaccagcatcaccatccgctgggacgccccctctgtcaccgtgagg tactacaggatcacccacggacagacaggtggagaaagccctgctaaggagttcactgtc cccggctcccagtccgaggccaccatctctaacctgaacccagggacagactacaccatc accgtctacgctgtgacagggaggggggacagcccagcctccagcacacccatctacatc agtcacaagactgacgtggagggccccaccaacatggacgtgacagatgtgaaggacaac accatcacagtgcgctggtccgcggcccagggccccatcaagggctacagggtcaccagc gtccccaagaatggacagggcccctctttctctgaggtggtggcccctgatcagactgag attacgtttactggcttgatgcccacggtggagtacgttctgagtgtgactgctctggga accgatggagaaccttccacacctctggtagagaacgccatcacagcaatggaccgtccc aaggccctgtccttctctgaggtggactccacctccctgaggatcacatgggacagtccg gacggcacggtgacatcatacagcgtgctgtactccagccctgaggagggcgagagagag ctgcgcccggcgcccagagggacagacgataccgtggtactgaggaatctccgccccggc acagagtacactgttaaggtcatcgctctgcacggacgcacccccagcaccccactggtg ggcacacaggccacagctatccctgctcccaccaatctggacatctctgaggttggtgac acctccttcaccgtgtcgtggcgctcccccagctccgggctgtctgggtaccgcgtggtt gtcaaccccaagaacaacaacggacccaccaaggagatgaccatcgccccagacaccacg cgcgccgtggtcccaggactcatggtggccactatgtacacagtgcacgtttacgccctg aagaactctgtgaccagccgacccctggagggagaggtcaccacgctggacaacatcagt cctcctcggcgtgtgcgtatctctgacgtgaaggactcagccatcacgctgacctggcgt gctaaggttgagaccatcactgggtacctcatcgaagctcagcccctcggcggcagccgc cccaccatcaagaagacaatccccggagagcagcgcacctacaccatcactggtctggag ccaggcacctcctacactatccacatctacaccatcaacggtgatgcacgcagcgccccc ttcaccctcacggccaccacagccaaaccagcggtgcattcccccaccaacctccagttc acctccctgacccccaactccatctccttcagctgggaaccccccgccacgcgcatcaca ggatattacatcacctacgaggaggcaggcagggcgcagccccgtgagcttaccccccgg ccccacgctggccagaactacgccaccatctctggtctgagaccaggcaccgagtacatc atcaagatcatcgctcttcagaatgtccagagaagcaccccattggtgggcacggccagg actcaacgtgaatccctgcttacactgccactccccaaccgccccggaggctacgaccac ctggacgtgcctgaagaaaaggagagccgtgtcccaacagtagtaggtaacaacggccta gacaccctggggggccagggccagaatgtggagtatactgagtacaacaaccagaacccc caggcaccctatgggaacggccagacacccctggtgtttgtgccccttccggacgcggag gggcgcagggtgccggtggtgagcgtgaatgtgcctggtggctctccctttggttttcca gagaaggacacaggaatccctcaggaggcccagacccagaccaccatcgcctggaagcct tacaagcagagttcagagtacctggtgtcctgcaaccctctgacacacaccaacgagaag atgttccagatgcgtctgcctggtacctccaccagtgccactctgattggcctgacaagc ggagcctcctacaacgttatcgtagaggccctgaagggggcgctcaaacacaagatcctg gaggagattgtcaccgccggcaacaccctgacagagggttccaccggcacagataaggac tcgtgctacgacaccttcacagccacctaccatgacgttgggactgagtgggagcgcatg tctgagacgggcttcaagctgtggtgcaggtgtctgggactaggcagtggacacttccga tgtgactcctctaagtggtgtcatgatggaggtaacaactaccgtatcggggagaaatgg gagcgccaggaggagaagggccccatgatgagctgcacctgcctgggcaacgggaaggga gagttcaagtgtgaaccacatgagtccacctgctatgacgatgggaagatgtaccagatt ggtaaccagtggcagaaagaatacctgggagccatctgtacctgcacctgctacggagga caacagggctggcgttgtgagaactgtcgtagaccaggtgctgaggttgactctagtctg ctgcagcccgtccgatacagagatcccaccaacacactacgcaaagtgaacatccagtgc cccatcgaatgccttcgacctgaactactggcagacgcactggcagaaggacacatcccc cagaatcccctggagtaa

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