Salmo trutta (river trout): 115196399
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Entry
115196399 CDS
T08542
Name
(RefSeq) integrin alpha-IIb-like
KO
K06476
integrin alpha 2B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115196399
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115196399
09142 Cell motility
04820 Cytoskeleton in muscle cells
115196399
04810 Regulation of actin cytoskeleton
115196399
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115196399
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115196399
04515 Cell adhesion molecules [BR:
stru04515
]
115196399
04090 CD molecules [BR:
stru04090
]
115196399
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115196399
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115196399
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115196399
CD molecules [BR:
stru04090
]
Proteins
115196399
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
115196399
NCBI-ProteinID:
XP_029613066
LinkDB
All DBs
Position
1:complement(42687003..42701313)
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AA seq
877 aa
AA seq
DB search
MTFDTKGDEVYLHQNLVIRSSKYHQWFGATVRSSGNYIVACAPLFHWNVIDVGERDEAQN
TPVGNCLVLNTLTGETVNFSPCRDIMTEKVYKVLKYNKDRRYCEVGFSSDITKEGRLLIG
APGGYYFQGQIISAGLPDIVNSANSQNAKPNVAGQTHSPETGGYDHYHGYSVAAGEFTGD
SIPDYVVGVPNDRNTAGSVKIYDGITIDFLGVKHTFLGSQVASYFGHSVAVTDINNDGQD
DILIGAPLFMECVSGQQLQEVGQVSVYLQRGRSTFHSKPDQKLTGSQVYGRFGSTIAPLS
DLDNDGFNDVGVGAPSSGIEGRVFIYMGTSDGLSPQYTQVIESPFRSLGPSPAQFGFTLR
GATDIDSNGYPDLIVGAWGVNKIAVYRAQAVVMAKTQLSLYPDFLNPDVKECEHTTTNEP
VACFTVMMCLSVSGHSIPEEIVLDAELQLDKMKQPMARRTLLLHTNLPQEYFQLTIQRDV
GVVCRNQTAYLRHESEFKDKLSPIFISLNYSLSNSNSQETILHGQRAVVAQTRIILDCGE
DNVCVPDLRLTSEEGTDRLLIGDDHPALLVITAENRGEGAYETELEIRPPANTHYQSMVT
DREGFSRLICAQKKENQTVVVVCELGNPMKQGQKLQAGLFFSVGNLEKVESHVSFTLQIK
SKNSQNPDSNVAHLRIDVSDEATLEMRGGSSPSECVLPIAKWEQKEQPADLEEVGPLVEH
VYELRNLGPSTVNARVVVEFPTHHHGDLLLYVFANASEDFLTCHSDSPDIDPYQLVKTGN
PTVGTVYKVKQNEVERPEPQHKETVHVNCTSGDTCLRFVCEAKGLERGWSAVVKVMSRLW
VQTFLERPYENYVLHSSARYAVIDMPSKIQPEELPSG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgacacaaaaggtgatgaggtttatcttcaccagaacttagtgataaggtct
tcaaagtaccaccagtggtttggcgctactgtgcgatcctctggaaactacattgtggcc
tgtgcccctctgttccactggaatgtgatagacgtgggtgaacgtgatgaggcccagaac
actccagtggggaactgcctagtgttgaacacactgacaggggaaacggtcaacttctcc
ccctgcagagacatcatgactgagaaggtttacaaagtcctgaagtacaataaagacaga
cgatactgtgaagtgggatttagctccgacataacaaaggagggaaggctccttattggt
gcccctggaggctactactttcaaggtcagatcatcagtgcaggactacctgacattgtc
aacagtgccaacagccagaatgccaaacctaatgtggctggacaaacccattcccctgag
actggtggatacgatcattaccatgggtattctgtggccgctggcgagtttactggagac
tcaataccagattatgtggttggagtacctaatgaccgcaacacagctggttcagtcaaa
atctatgatggaattacaattgactttttgggagtgaaacacacattcttaggctctcag
gtggcctcttactttggccacagcgttgcagtgactgatattaacaatgatggacaagat
gacatcctaatcggggcgcccctcttcatggagtgtgtgtcgggccagcagttgcaggag
gtgggccaggtgagtgtttacctgcagagagggcgctccaccttccactccaagccagac
cagaagctgacaggttcccaggtgtacggacgctttggcagcaccatcgcccccctcagt
gacctggacaatgacggttttaatgatgttggtgtgggagccccatcctcaggcattgaa
gggagggttttcatctacatgggaactagcgatggactgtctccccagtatacccaggtc
attgagagtcccttccggtccctaggtccctctccagcacagtttggcttcaccctgaga
ggagccactgacattgattcaaatggctacccagatctaattgttggtgcatggggagtc
aataagattgctgtgtacagggctcaagccgtggtgatggcaaagacccaactctccctc
taccctgacttcctgaacccagatgtgaaggagtgtgagcacaccaccaccaacgagcct
gtggcctgcttcacagtcatgatgtgccttagtgtgtctggccacagcattccagaggag
atagttctagatgcagagcttcagctggacaagatgaaacagccaatggcccggaggacc
ctgttgctgcacacaaatctgccccaagagtatttccagctaaccattcagagagatgtg
ggagtggtctgcaggaaccaaaccgcttacctaaggcatgagtcagagttcaaggacaag
ttgagccccatcttcatctccctgaactacagcctgtccaactccaactcccaggagacc
atactgcatggccagagagctgtggtcgcacagaccagaatcattctggactgcggagag
gacaatgtctgtgtccctgacctgaggctgacttctgaagaaggtaccgaccgtcttctg
ataggggatgaccaccctgccctgctggtcatcacagcggagaacagaggagagggggcc
tacgagaccgagctggagatacgcccaccagccaacacacactaccagagtatggtgact
gacagagagggcttcagcaggttgatctgtgctcagaagaaggagaaccagacggtggtg
gtggtctgtgagctgggaaaccctatgaagcagggccagaagctccaggccggtctgttc
ttcagcgtggggaacctggagaaggtggagagccacgtgtcattcacattacagatcaaa
agcaagaacagccagaaccctgacagtaatgtggcccatctgaggatcgatgtcagcgat
gaagcaactctggagatgcgggggggctcctctccatctgagtgtgtcctgcccattgcc
aagtgggaacagaaggagcagcctgctgacctggaggaggttggcccgctagtggaacac
gtctatgagttgagaaacctgggtccgagcacggtcaacgccagggtggtagtagagttc
cccacacatcaccatggagacttactgctctatgtgttcgctaacgcctccgaggatttc
ctcacctgccactctgactcccctgacatcgacccatatcagttggttaagaccgggaat
cctactgttggtacagtgtacaaggttaaacagaatgaggtggaacgaccggagcctcag
cacaaagagaccgttcatgtgaactgcaccagtggagatacctgtctgaggtttgtgtgt
gaggccaaaggtctggaaagaggctggagcgctgtagtgaaggtgatgtcccgactctgg
gtacaaaccttcctggagaggccttatgagaattatgtcctccactcttcagcacgctat
gcggttatagatatgccctctaagatccagcctgaagagctgccaagtggctga
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