Salmo trutta (river trout): 115196441
Help
Entry
115196441 CDS
T08542
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
stru04148
Efferocytosis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115196441
04148 Efferocytosis
115196441
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115196441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115196441
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115196441
Hops complex
115196441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
Motif
Other DBs
NCBI-GeneID:
115196441
NCBI-ProteinID:
XP_029613133
Ensembl:
ENSSTUG00000023447
UniProt:
A0A674A9C5
LinkDB
All DBs
Position
6:57822825..57836512
Genome browser
AA seq
835 aa
AA seq
DB search
MAFITANWNPLGEAFYRKIELYEMGWSLRDGLKECLVAAAPYGGPIALLRQSQRPSSSAR
PQLEIYSSSGTNMASFPWKSGPVRQLGWTVCDDLLCIQEDGTVLIYDLFGAFKRHFSMGN
EVVQNQVLEAKVFHSPYGTGVAIVTGASRVTLATNIDDLKLRRLPDVPGLQGAPSCWAVL
TQDRQTKVLLANGTDLYILDNTSCTPVTPPGLSPQACSIVNMAVSFSYKYLALFTDSGHL
WMGSANLKDKLSEVDTKVRTPPKQMVWCRRPKSQQPSVVIMWDRLLLVAGECTDTIQYTL
DEDCVCVAELDGVRIVGGSRHELLQEVPSACQDIFKIASMAPGALLLEAHKEYEKSSQKA
DEYLREIKEQSVLGEAVRQCVEAAGYEHEPETQKTLLRAASFGKCFLSNYPPEPFVSMCR
DLKVLNSVRDYTVGIPLTHTQYKQMTVQVLIDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEPDESIAHAVSMKLGEAAGISYSEIAARAYECGRTELAIKLLEFEP
RSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNFYVKASYKEKRLEARLSLLQSAVDEYNKAKNE
FAAKATEEEMKLLRFQRRLDEEKGEALLGLSLQETLHALLTSNFHKQAEQLYRDFRVPDK
RYWWLKLTALAEKDDWEEMEKFAKSKKSPIGYLPFVEVCVKQHNKYEAKKYVSKVAPEQK
VKAHLAIGDLEGAAEAAIERRSEGEISTVLSRCSPTTDRALLERLNRARSTAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcatttataacggcaaactggaatccgctcggggaagcgttttacaggaagatcgag
ctgtatgagatgggatggagcttgagagatgggctcaaggaatgcctggtggcagcagcc
ccatacgggggaccgatcgctctcctaagacagtcacagaggccttcctccagcgcacgg
ccccagctggagatctactcctcctcaggcacgaacatggccagcttcccgtggaagagt
ggcccagtgagacagctgggttggacagtgtgtgatgacctgctgtgtatccaggaggat
ggcactgtcctcatctacgacctgtttggtgccttcaaaagacacttcagcatgggcaac
gaggtggttcaaaaccaggtgctggaagccaaggtgttccactctccctacggaaccggt
gttgccatagtaacgggagcctcacgcgtcaccctggccacgaacattgacgacctgaag
ctgaggagactcccggacgtcccaggcctccagggggcaccctcctgctgggcagtgctg
actcaggacagacagaccaaagtgctgctggccaacggaactgacctctacatactggac
aacacatcctgcacccctgtgacccctccaggcctctctccccaggcctgtagcattgtg
aacatggctgtgtcattcagctataagtacctggctctgttcacagactctggacacctg
tggatgggctcagccaacctcaaggacaagctgagtgaggtggacaccaaggtgaggacc
cctcctaaacagatggtctggtgcagaaggccaaagagccagcagccctctgtggtcatc
atgtgggacaggctcctactggtggccggagagtgtacagacaccatccaatacactctg
gatgaggattgtgtgtgtgtagcagagctggatggagtaaggatcgtaggagggtccagg
catgagctgctgcaggaggtgccctcagcctgccaggacatctttaaaatcgcctccatg
gctcctggagctttactactggaggcacacaaggagtacgagaagtccagtcagaaggca
gatgagtacctgagagagataaaggaacagagtgtattgggggaagcggtgagacagtgt
gtggaggctgctgggtatgaacatgaaccagagacccagaaaacactgctcagggctgcg
tcctttggaaagtgttttctcagtaactacccaccagagccgtttgtcagtatgtgtcga
gacctgaaagttctcaactctgtccgagactacactgtggggatccccctcacacacaca
cagtacaaacagatgactgttcaggtcctcattgacaggttggtgtaccgtaagctgtat
cccctggccattgagatctgtcgctatctgaaaacaccagagtaccagggagtcagcaga
gttctcaaacactgggcctgctgcaaggtccagcagaaagaagagcctgatgagtccata
gcacatgctgtcagtatgaagctgggtgaggcagcaggaatctcctactctgagatcgct
gccagagcatatgagtgtggcaggacggaactggccatcaagttgttggagtttgagcct
cgttctggggagcaggtccccctgctactgaagatgaagaggagtcagctggccctgagt
aaagctatagagagtggagatacagacctggtttacacggtggtgacatacctgaagaac
gagatgaacagaggagacttcttcatgacgctcagaaaccaaccggtagccctgagcctc
taccggcagttctgtaagcaccaggaacaggacacactgaaggatctgttcaaccaagac
gatgaccatcaggagctgggtaacttctacgtcaaggccagttacaaggagaagaggctg
gaggctcgcctgtctctgctgcagagtgctgtggacgagtacaacaaggccaagaacgag
tttgcagccaaggcgacagaggaggagatgaagctgctacggttccagaggcgtctggat
gaggagaagggagaggctctgctgggcctgtctctccaggagactctgcatgccctcctc
acctccaacttccacaagcaggctgagcagctctacagggacttcagagtaccagacaaa
aggtactggtggctgaagctgacagctttggcagagaaggatgactgggaggagatggag
aaatttgccaagagcaagaagtcccccatcggctatctaccctttgtggaggtgtgtgtg
aaacaacacaataagtacgaggccaaaaagtatgtttccaaggtggccccagagcaaaag
gtcaaagcccacctggccataggtgatctggagggggcagccgaggcagctatagagagg
aggagtgaaggagagatcagcactgtcctgtcccgctgttctcccaccacagaccgagcc
ctgctggagagactcaaccgagccagatccactgccgccaaaaagtga
DBGET
integrated database retrieval system
