Salmo trutta (river trout): 115196459
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Entry
115196459 CDS
T08542
Name
(RefSeq) sorting nexin-4-like isoform X1
KO
K17919
sorting nexin-4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115196459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115196459
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115196459
Membrane trafficking [BR:
stru04131
]
SNARE
SNARE associated proteins
Others
115196459
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
115196459
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
115196459
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115196459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
115196459
NCBI-ProteinID:
XP_029613178
Ensembl:
ENSSTUG00000026617
LinkDB
All DBs
Position
6:58375921..58382631
Genome browser
AA seq
434 aa
AA seq
DB search
MADAGNKESTTIGGDEFTNTELENNKNNTMVQEGSTLLRRMEISVAEAEKRTGKNTVNMQ
EIFTVYLIETRSIDAITEGHNPAPDSLWRRYSEFEILRNYLLVTYPFIVVPPLPEKRAEF
VWHKLSADNMDPDFVERRRVGLENFLLRVASHSVLSNDKILYHFLTEEHRWKEVVYETGF
QAKADSRIKALSATFRVKNPDKRFTEMKHYSDELQSLTSQLLRVRARVADRLYGVYKVHG
NYGRVFSEWSALEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYAEALRA
VCRKHELTQYELETASSDLISKKQQREELATGMVRTFSFKGMTNKLFGQETPEQREAKLS
LLEEQIVQGEETVTEKTVECEEYVKGAWVDMQRFKEQKDRDLREALIGYAIMQISMCKKG
IQVWTNAKECFHKM
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctggcaataaagagtcaacgacgattggaggagatgaatttaccaacaca
gagttggagaataacaagaataacacgatggtgcaggaaggatccactctgctgcggaga
atggagatcagtgtggccgaggcagagaaaagaactgggaaaaatacagtgaacatgcaa
gagatattcacagtgtacctcatagaaactcgatccatagatgcaataacagaaggccac
aacccagccccagactctctctggaggagatacagtgaatttgagattctccggaactat
ttgttagtcacctatccatttatcgtggtgccgcctttgccagagaagagggcagagttt
gtttggcacaagctgtctgcagacaacatggacccagactttgtagagaggcgcagggtt
ggtctggagaacttcctacttcgcgtggcctcccattcggttctgtccaatgacaaaatc
ctataccacttcctgactgaggaacacaggtggaaggaggtagtgtatgagacagggttc
caagccaaggcagactccaggattaaagctctgagcgcaactttcagggtgaagaaccct
gacaagcggttcacagagatgaaacactacagcgatgagcttcagtctctcacctcccag
ctgctcagagtcagagcaagagtagcagacaggctctacggcgtatacaaagtccatggg
aactacggaagagtgttcagtgagtggagtgccttagagaaggagatgggagacggtcta
cagagtgctggacaccatatggatgcctatgctgcctcagtagatgatatcttggaggaa
gaggagcactacgcagaccaactgaaggaataccttttctatgctgaagccttaagggct
gtgtgtaggaaacacgagctgacccagtatgagctggagacggcctcctcagacctcatc
tccaagaagcagcaacgggaggagctggccactgggatggtacggacgttctccttcaaa
ggaatgaccaacaagctgtttggtcaggagacaccggagcagagggaggctaaactcagc
ctactggaggagcagatcgtccagggagaggagacggtcacagagaaaacagtggagtgc
gaggagtacgtgaagggtgcgtgggtggacatgcagcgcttcaaggagcagaaggacagg
gatctgagggaggctctgattggctacgccatcatgcagatcagcatgtgtaagaagggc
attcaagtgtggaccaatgctaaggaatgtttccacaagatgtaa
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integrated database retrieval system