Salmo trutta (river trout): 115196551
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Entry
115196551 CDS
T08542
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
stru04217
Necroptosis
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115196551
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115196551
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115196551
04621 NOD-like receptor signaling pathway
115196551
04622 RIG-I-like receptor signaling pathway
115196551
04623 Cytosolic DNA-sensing pathway
115196551
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115196551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115196551
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Interferons
115196551
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
Motif
Other DBs
NCBI-GeneID:
115196551
NCBI-ProteinID:
XP_029613238
Ensembl:
ENSSTUG00000013029
LinkDB
All DBs
Position
1:43663505..43667813
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AA seq
193 aa
AA seq
DB search
MYRFTGICWSRRRRRHVILIAACCSLENESPRLRMQSMCHCCEWIRHHFGHLSAEYLSQL
DQMGGDITKQNVPVLFPTSLYRHIDDAEFEDKVRFLNETIYQIIKLFDGNMKSVIWDKKN
MDDFLNILDRQFENLNSCVSPAMKPERRLKRYFRKLNRRVLRKMNYSAEAWELIRKETKR
HLQRLDILAGQMY
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtatagatttactgggatttgttggtccagaagacggaggaggcatgtaattcttatt
gctgcatgttgtagtctggaaaatgaaagtccccgcctccgtatgcagagcatgtgtcat
tgctgtgagtggatccgacaccacttcggtcacttgagcgcagaatacctttcccagctg
gaccagatgggaggagatatcacaaagcagaatgtccctgtcctttttccaacatcactt
tacagacacatagatgatgccgagtttgaggacaaagtcagattcctgaacgagaccatc
tatcaaatcataaaactgtttgatgggaatatgaagtctgtcatctgggacaagaaaaac
atggacgatttcctaaacattctggatcgccaatttgagaaccttaattcctgtgtatca
cctgccatgaaacctgagaggagactgaaacggtacttcaggaagttgaataggagagtt
ctgagaaaaatgaactacagtgcagaggcgtgggagctcatcaggaaagagacaaaacgt
catctgcaaagattggatatccttgcgggacaaatgtactga
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