KEGG   Salmo trutta (river trout): 115196723
Entry
115196723         CDS       T08542                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
stru  Salmo trutta (river trout)
Pathway
stru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115196723
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:stru01009]
    115196723
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115196723
Protein phosphatases and associated proteins [BR:stru01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115196723
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115196723
    Little elongation complex (LEC)
     115196723
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4351
Other DBs
NCBI-GeneID: 115196723
NCBI-ProteinID: XP_029613451
Ensembl: ENSSTUG00000036746
UniProt: A0A674CIN8
LinkDB
Position
7:complement(2022371..2061233)
AA seq 603 aa
MAALRQEHRYGLSCAKINKNVPNKTLYHVKLTDTAIRTLEAYQNLKGSLPNQPAICFKGS
QGYIKIPAPSPDASDALRVFSFYLSSDSKDKPQASFDCTHQYVSREGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTRGKCVKIQRKQGLSSSMDSSSNK
HSPSNKRSGAPSPVALRPLRDRIIHVLALKAYRKPELLLWLERERASPKDKADLGAVLDD
VAKLNPKDHSFTLKDEFYSHVQKDWPGYLEEEKQLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPGDSPSQLSPVKTPSVKRPFPSELSDCQTPKKQRLLDHSLPLQSPSNGHLGPIGA
RSSSGPGNTSVQTKTEFERTNNHIQGSPNGLYTRHKLDGSSSIPKLERTEPVPAVPSPKA
PQTEPSICTDQQLANGQHKKKKSKKHKDKEREHLKQDWIENSPDLKQNQEHFNDHEEAKT
AVTRTSPEELPDYFIKYNIITASEQRQQYKEDFCAEYDEYRALHHRIGTITEMFVQLGSK
INTLSPGTQEYKLMEDQILQKYRKYKKKFPGYQEEKKRCEYLHQKLSHIKGLILDYDRIQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaaaaac
gttccaaataaaactctgtatcacgtcaagctaactgataccgccattcgaacgcttgaa
gcctatcaaaatcttaagggatccttaccaaatcagccagcaatttgcttcaaggggagc
caggggtacatcaagatccccgccccgtccccagatgcctcggacgcactacgagtcttc
tccttctacctgtccagtgatagcaaggacaaacctcaggccagctttgactgcacacac
cagtatgtctcaagggagggcagggagcacctggagggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcgtaccagatgacccgggagcgcatgtctcaggtg
gagaaggacatcatgagcaggtcggccatcgagatcaagccaggctccacacgtggtaag
tgtgtgaagatccagaggaagcagggcctgtcgtcaagcatggacagcagcagcaataag
cactcccccagcaacaagaggagcggggcccccagcccagtggccctcaggcccctaaga
gaccgcatcatccacgtcttggccttaaaggcctacaggaagcctgagctgctgctgtgg
ctggagagggagagggctagtcctaaggacaaggctgacctgggagcagtactggacgat
gttgctaaactgaatcccaaagaccacagctttactctgaaggatgagttctacagtcat
gtccagaaggattggcctggttacctggaggaagagaagcagctcatccataggctcctg
gccaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctggggattctccgtcacaactcagcccggtcaaaactccctct
gtgaaacgcccatttccctctgagctatctgattgtcagacccccaagaagcaaagacta
ttagaccacagtttacccctgcagtccccttccaatggacaccttggtcccattggagcc
cgtagctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaacc
aacaatcacatccagggaagccctaatggtctctacacacggcacaaactggatggttcc
tccagtattcccaagctggagaggacagagccggtcccagcagtaccaagccccaaggcc
ccacaaactgagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggaacgggagcacttaaaacaagactggatagag
aacagtcccgacctgaagcagaaccaggagcatttcaatgatcatgaggaggctaaaaca
gctgtcactcgtacgtcaccggaagagctgcccgactatttcataaagtacaacatcatc
acagcctcagagcaacggcaacagtacaaggaggatttctgtgcggagtatgatgagtac
agggccctgcatcaccggatcggtactatcacagagatgtttgttcagctgggctcaaag
atcaacactctctcccccggtacacaggaatacaagctcatggaggaccaaatactgcag
aaatacagaaaatataagaaaaagttccctggttaccaggaagagaagaagcgatgcgag
tatctgcatcagaaactgtctcacatcaaaggtctgatcctggactatgaccgtatccag
gccccttcatag

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