Salmo trutta (river trout): 115196735
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Entry
115196735 CDS
T08542
Symbol
blm
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115196735 (blm)
03460 Fanconi anemia pathway
115196735 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115196735 (blm)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115196735 (blm)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115196735 (blm)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115196735 (blm)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115196735 (blm)
Bloom's syndrome complex (BTR)
115196735 (blm)
FA (Fanconi anemia) pathway
115196735 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
115196735
NCBI-ProteinID:
XP_029613467
UniProt:
A0A674CRX1
LinkDB
All DBs
Position
7:2493508..2521610
Genome browser
AA seq
1477 aa
AA seq
DB search
MMSSLPQNNLKEQLERHSNAAQRKLSLSKPKPGTFCFKKKSTSGVTKVEVPTKVNSSNGL
TNRSVNVPHDNAVIKPPLTFSTKPERPLAKINFSSVNPKSKYEAISPLLNPFSVRKPIPA
VSALKISPALTKSDSLITGSNGSKPTGLDSSFGISLDGWDDFDDFETPVKGKSTLPSPGI
SGRSAKVTPVSSVEQLDTNTHRSDKDVPLQALNTKTNSRHRNKCSLDGTEQCTLTMEDSQ
DASESASSAPRNNPIQDPAEWKHWEVEDSPIKMVRRRPSASQAKSVLSDSEDESIAAPGP
VEKTDHQSKWNETDVIDLDDKSELDGDLDFISPSPSPEDFSHSTSTKEARLKSAGSAIRK
DISPVSTRGSVSSLQRVSDGPLKERKVTNPTSEDQLLSIMESICALVDSIPDHELLGLSC
GTELLLQRAHRKRIIATGSSDTYFRTQQPDSTVLESRFSEKTTFSFATPSVMSSTTCLPK
GKGDSSMKALPFRRSSVISVDYDSSVFEDSDCMINVQTPGISWRPSTQENPIFTGDKKNA
STTGRSNCDSPSNYGIFKKQIGNVAQSNLFFSPKSPAAAVQMTGESSTQASVAQAPAVTE
PDDFFIDDFDIDDFNDSDIPDYFEPPSSSVSRQDSSSVSKAVREGGPSTSTWQKKPATPA
PVATPPKITSPEPTYRNPAHDRFRGFNFPHCPEMMKIFYKRFGLHQFRFNQLEAINATLL
GEDTFVLMPTGGGKSLCYQLPACVCTGVTVVISPLKSLIVDQVQKLTTLDIPATSLSGEK
TDSEAARIYLQLSKKDPIIKLLYATPEKVCASGRMISALQNLYERGLLARFVIDEAHCVS
QWGHDFRPDYKRMYELRQKFPKVPIMALTATATPRVQKDILNQLQMTQPQVFTMSFNRNN
LKYAVLPKKPKKVDEDCIDWIKKNYPRDSGIVYCLSRNDCDNMADSLQRAGILALAYHAG
INDKDREYVQTKWINQDGCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAG
RDGEISHCILFYSYSDVIRIKRILTMDKDGNHHTKATHLNNLHSMVHFCENVMDCRRIQL
LAYFGEHKFNPGFCKEHPDVICDNCARPNQYKARNVTEDVKKIVRFVQENCEKVGSRYNK
SANQNRLTLNMLVDIFLGAKTARVQSGMFAIGKAYSKHNADRLFKKLVLDHLLVEDLYIT
VNSQAVAYISAGPKAINVLGGHMQVEFYETESASSIRKHKTAVAKDVSKSEEMVQKCLQE
LTDLCKRLGKVFGIHYYNIFSTATLKMIAETLSADPDVLLTIDGVTEDKLEKYGADVIAL
LQKYSEWKLPVEEQSDTTERSSTMAWIDPRRGRGDDEEDCYDDAGSSSYFNNSNGRGAKR
KKAPAFKKSKKRKGYTNSNSKGGYSNNGSWTGSNSRGGSKGRGSAAGRGSAAGRGSAAGR
GSRPSAAGPVGRRPGFMALPTPQTNSRPFLKPAFSVL
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccagtcttcctcaaaataatttgaaggaacaactcgagagacatagcaatgct
gctcagagaaaactgtcgttgtctaagcctaaaccagggacattttgtttcaaaaagaag
tccacatcaggtgtcaccaaggtggaagttcccactaaggtaaacagctcaaatggttta
acaaacaggagtgtcaatgttcctcatgataatgcagtaattaaacctcctttgacgttt
tcaaccaagcccgaaagacctctcgccaaaatcaacttctcctcagtcaatcccaaaagc
aagtatgaagccatcagtcctttattaaaccccttttcagtgaggaaaccgatcccagct
gtgtctgctttaaagatctcccctgctttgaccaaatctgatagcttgatcacaggtagc
aatggcagcaaacccacaggacttgatagctcttttggtatttccctggatggatgggat
gattttgatgactttgaaacccctgtcaagggcaaaagtactttaccaagcccagggatc
tcaggtaggagtgccaaggtgacacctgtttccagtgttgaacaattggatactaacaca
cacagatcagacaaagatgtccctctacaagcgctgaacacaaagaccaacagccgtcat
agaaataagtgtagtcttgatgggacagaacaatgtactctcacaatggaggactcacaa
gatgcttcagagtctgccagttctgctccaagaaacaatcccatccaggatccagcagag
tggaagcactgggaggtggaggattctcccattaaaatggttagaagacgaccttctgct
tctcaagccaagtctgtgctgagtgacagtgaagatgagagcatcgctgcacccggtcca
gttgaaaagacagatcatcaaagtaaatggaatgagacagatgtcatagaccttgatgac
aagtccgagctagatggagacctagatttcatctccccttccccaagtccagaggatttc
agtcattctacttctacaaaggaagcaagattgaagtcagctggctctgcaatccgtaaa
gacatcagccctgtatcaacaagagggtcggtgtcaagcctgcaaagagtgtctgatggt
cctcttaaagaaagaaaagtcaccaatccaacgtctgaagatcagctcttgagtatcatg
gagtccatctgtgctctggtggattccatccctgatcatgaactattaggcctgtcctgt
gggacagagctcttactgcagcgggctcataggaaaaggataattgctactggcagcagt
gacacatatttcaggacacaacagccagacagcactgtcttggaatccagattcagtgaa
aagactactttttcctttgctactccaagtgtcatgtcttccaccacttgcctgcccaag
ggtaaaggagattcttccatgaaagcccttcccttcaggaggtcctcagtcatatctgtg
gactacgacagtagtgtttttgaggactctgactgtatgattaatgttcagactccaggc
atctcttggagacccagcactcaggaaaatcctattttcaccggagacaagaagaatgca
tccactacaggccgaagtaattgtgactctccatcgaattacggtatcttcaaaaaacaa
attggtaatgtggctcagtcaaatctcttcttctcaccgaagagcccggcagctgctgta
caaatgactggggagagcagtacccaagcctctgtggcacaagccccggcagtcacggag
ccagacgatttcttcattgatgactttgacatagatgacttcaatgattcagatatccct
gattactttgaacccccaagctcctcagtgtcaaggcaggactccagttctgtctctaaa
gcggtgcgtgagggaggaccaagtacatcaacatggcagaagaaaccagctacaccagct
cctgtggccacgcctcctaaaatcacctctcctgagcccacatacagaaaccctgcccac
gatcgcttcagaggcttcaacttcccccactgtccagagatgatgaagattttctacaag
cgctttggtctccatcagttccgattcaatcagttggaagccattaatgctacgttgtta
ggtgaagacacatttgtcctgatgccaacaggagggggtaaaagtctttgctaccagctg
ccggcctgtgtgtgtacaggagtcactgtggtcatctcaccactgaaatcactcattgta
gaccaggtccagaaactcactactctggatattcccgccacaagtttgtctggtgagaag
actgacagtgaagcagccaggatctacttgcagctgtccaagaaggaccccataattaaa
ttgctctatgcaactcctgaaaaggtgtgtgcgagtggcaggatgatcagtgcccttcag
aacctgtatgagagaggtcttttagcacgctttgtcattgatgaggctcactgtgtcagt
cagtggggccatgacttccggccagactacaagcggatgtacgagctgcggcagaagttc
cccaaagtgccgatcatggccctgaccgccactgccaccccccgcgtccagaaggacatc
ctcaaccagctgcagatgacccagcctcaggtgtttaccatgagcttcaacagaaacaac
ctcaaatacgctgtgttacccaagaaacccaagaaggtagatgaggactgcattgactgg
atcaagaagaattatccacgtgattctggcattgtgtactgcctgtcccgtaatgactgt
gacaacatggctgacagtcttcagagagctggtatactagcgctagcctaccatgcaggc
atcaatgacaaagacagagaatatgtgcagaccaaatggatcaatcaggatggctgccag
gtcatgtgtgccaccatagccttcggcatgggcatcgacaagcctgatgtgcgctatgtg
atccacgccagtctccccaagtcagtagagggctactaccaggagtcaggcagagcaggc
agggacggagagatctctcactgcatcctcttctactcctactctgacgtcatccgcatc
aagaggatcctcaccatggacaaagatggaaaccaccataccaaagccactcacttgaac
aatctgcacagtatggtacatttctgtgagaacgtgatggactgccgaaggatacagctg
ctggcttactttggagagcacaagttcaacccaggcttctgcaaggaacaccctgatgtc
atctgtgacaactgtgccagacccaatcaatataaagcaagaaacgtgactgaagatgtg
aagaagattgtgagatttgtccaggagaattgtgaaaaagttggctccagatacaacaaa
tctgcgaaccaaaaccgattgactctgaacatgctggtggacattttcttgggtgctaaa
accgcccgtgtccagtcagggatgtttgcgataggaaaggcttactccaaacacaatgct
gaccgtctgttcaagaagctggtgctggatcacctcctggtagaggacctgtacatcaca
gtcaacagccaggcagtggcctacatctctgctggacccaaagccatcaatgtcctcggg
ggacacatgcaggtggagttctatgagaccgagagtgcctccagcatcaggaagcacaaa
actgctgttgccaaggatgtctccaagagcgaggagatggtccagaagtgtctgcaggag
ctcactgatctgtgcaagaggctgggcaaggtctttggcattcactattacaacatcttc
tccactgccaccctgaagatgatagccgagactctgtcggccgacccagatgtgctgctg
acgattgatggtgtgacggaggacaaactggagaagtatggagcagatgtcatcgcgctt
ctgcagaaatactctgagtggaagctacctgtggaggagcagtctgacaccactgaacga
agctccactatggcatggatagacccaaggcgaggccgcggagacgacgaggaggactgt
tatgacgacgctggatcatccagttatttcaacaatagcaacggcagaggagcgaagagg
aaaaaggcccccgccttcaagaaatccaaaaagagaaaaggatatacaaactccaactct
aaaggggggtacagcaacaatgggtcatggacagggtccaactccagaggtggatctaaa
gggcgggggtcagcagcaggacgtgggtcagcagcagggcgtgggtcagcagcagggcgg
ggctcaaggccttcagcagcaggcccagtggggaggaggcccggctttatggccctcccc
acaccacaaacaaacagccggccattcctcaaaccagccttctctgtactgtag
DBGET
integrated database retrieval system
