Salmo trutta (river trout): 115196801
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Entry
115196801 CDS
T08542
Name
(RefSeq) partitioning defective 6 homolog alpha
KO
K06093
partitioning defective protein 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
stru04517
IgSF CAM signaling
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115196801
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115196801
09144 Cellular community - eukaryotes
04530 Tight junction
115196801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115196801
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
115196801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
L51_S25_CI-B8
Motif
Other DBs
NCBI-GeneID:
115196801
NCBI-ProteinID:
XP_029613576
UniProt:
A0A673WXA4
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Position
7:complement(6032438..6070954)
Genome browser
AA seq
406 aa
AA seq
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MVLSAGVQRANMSRYQRTPLKNTDNVVEVKSKFEAEYRRFALKKSSTCGFQEFYRLLQTV
HHIPGVEVLLGYADIQGDLLPINNDDNFYKALSSANPLLRIIIQKRDVDEPVVFATNSLQ
RRKKGLAGLRPAQQKTKPGLMIGLPQDFRQISSIIDVDILPETHRRVRLHKHGTHKPLGF
YIRDGVSMRVTPQGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVNGIDVAGKSLDQV
TDMMVANSHNLIVTVKPANQRNNVVPRASKVSAGGNSSSGSVGSAFSHDSAPSTASQSVS
HHSNSNSVAEGDSDEDGDLIIETDSLPPYLPHRCVSNGNGSHRESPLSSSLGQRPLPQSM
SLPSCGSLSDSKASLSSLTTPTHNGSPTKTSSSQESMREDGNIITL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggtcctatccgctggggttcaacgcgctaacatgtcaaggtaccagaggacccccttg
aaaaacaccgacaatgtggtagaggtcaagagcaaatttgaggcggagtacagacgtttc
gctttgaagaagagcagcacctgtggctttcaagagttttaccggctgctgcagaccgtt
caccacatccccggtgtggaagtgctgctgggatatgctgacatccagggtgacctgctg
ccaatcaacaacgatgacaacttctacaaagccctgtcctcagccaacccactgctcagg
atcatcatccagaagagagatgtggatgagcctgtggtctttgccaccaactccctgcag
aggaggaaaaaaggcctggcagggttgcgcccggcgcagcagaagaccaaaccaggcctg
atgattggccttccccaggacttccgccagatctcctccatcatcgatgtcgacatcctg
cccgagacacaccggcgtgtccgcctgcacaagcacggtacccacaagcccttgggtttc
tatattcgtgacggggtgagcatgcgggtcacgcctcagggcgtggagaaggtgcctggt
gtcttcatctcgcggctggtgcgtggaggcctggctgagagcacaggcctgctgggggtc
aacgatgagatccttgaggtcaatggcattgatgtggccggcaaatctttggaccaggtg
acagacatgatggtggccaacagccacaacctgatcgtgacggtgaagccggccaaccag
cgcaacaacgtggtgccccgggcaagcaaggtctcggcaggggggaacagctcctctgga
tctgtaggctctgcattctcccatgactcagcccccagcactgcctctcagagtgtcagt
caccatagcaacagtaacagcgtggcggagggcgacagcgacgaggacggagaccttatc
attgagactgacagcctgccaccttacctgccccatcgctgtgtgtccaacggtaacggc
agccacagagagtctccattgtcctcgtcactagggcaacggcccctcccccagagcatg
tccctgcccagctgcggctctctgtcagacagcaaggcctccctgagctccctgaccact
cctacacacaacggcagccccaccaagaccagcagcagccaggagagcatgagagaggat
ggaaacatcatcacactgtaa
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