Salmo trutta (river trout): 115196810
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Entry
115196810 CDS
T08542
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115196810
03036 Chromosome and associated proteins [BR:
stru03036
]
115196810
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115196810
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115196810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_15
DUF1442
Motif
Other DBs
NCBI-GeneID:
115196810
NCBI-ProteinID:
XP_029613591
Ensembl:
ENSSTUG00000007638
UniProt:
A0A673X8R3
LinkDB
All DBs
Position
7:6320579..6345011
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AA seq
799 aa
AA seq
DB search
MKYSFLVQVLPMDGGPTDVVVEAKDFITYEGEETVADLLQQAAEGVMIQQPEGVAGLDTQ
QLVEGVNVEMMVMDSLDPALLQMKTEVMDAPVVTAHEATVTTVDETQIITLQVVNMDEQQ
LGGLGELQLVQVPVSAVPVTQATVEALQGTFVDTTAMPKDGNPVICHTLPLPEGFQVVKV
GANGEVETVEQDELQHQEEQQVHPEEEELHCEPEPEEPQWAKDPDYQPPAKKTIKKAKMS
KLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQC
ELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCD
MAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYAS
RDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIAR
KSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQER
HMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKAFTRRN
TMARHAENCNGDPSEGENGSPPKKGRGGRKRKMRSRKDDDEDDDDDDSEDNADPELDDID
EEDEEAEAALLEEEEEEEIELEQAPPTKPIPAPVEPPVKRKRGRPPKNIPKPSPPAKASK
AAPKGKAAAAAAIVQVEEENTGAIENIIVKKEPEVEQAAPEVVVEQPEEAGVETVELPVA
DTAPNGDLTPEMILSMMDR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctttctagtgcaggtgttaccgatggacggaggaccaacagatgttgtg
gttgaggccaaggacttcatcacctatgagggggaggagacggtggcagacctgctccag
caagcagcagagggggtgatgatccaacagccagagggagttgctggtctggatacccag
cagctggtggagggagtcaatgtggagatgatggtaatggactccctggacccggccctg
ctgcagatgaagactgaggtgatggacgcccctgtggtcacagcccacgaggccacggtc
accacggtggatgagacccagatcatcacactgcaggttgtcaacatggatgagcagcag
ctgggaggcctcggggagctacagctggtccaggtccctgtctctgctgtccctgtcacc
caggccactgtagaggcgctacagggcaccttcgtggacaccacggccatgcccaaagac
ggaaaccctgttatctgtcacaccctgcccctgccagagggattccaggtggtgaaggtt
ggtgcgaatggtgaggtggaaacagtggagcaggatgagctccagcaccaggaggagcag
caggtccatcctgaggaggaggagctgcactgtgagcccgagcctgaagaaccacaatgg
gccaaggaccccgactaccagcccccagccaagaagaccatcaagaaggcaaaaatgagc
aagctgcgctacaacacagagggggataaagacaacatggacgtgtctgtgtacgatttt
gaggaggagcagcaggaagggatgctctctgaggtcaacgcagagaaggtggtgggcaac
atgaaaccccccaaacctaccaaaattaagaagaagggtgtgaagaaaacattccagtgt
gagctgtgtagctacacctgtccccgccgctccaacctggaccgacacatgaaaagccac
acagatgagaggccccacaagtgccatctgtgtggaagggccttcaggaccgttaccctg
ctgaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagattgtgac
atggccttcgtgaccagtggagagctggtccgacatcgtcgctacaagcacacacatgag
aaacccttcaagtgctccatgtgtgactatgccagtgtagaggtgagcaagttaaagcgg
cacatccgttcccacactggggagcgtccgttccagtgcagtttgtgcagctatgccagc
agagacacctacaagctgaagagacacatgaggacacactcgggagagaagccgtacgag
tgctacatctgccacgcccgtttcacccagagtggaaccatgaagatgcacatcctgcag
aagcacacagagaacgtggccaagttccactgcccccactgtgacacggttatcgcccga
aagagtgacctgggcgtccacctgcgaaaacagcactcgttcattgagcagggcaggaaa
tgtcgttactgtgatgctgtgttccacgagcgctacgcactcatccagcaccagaagtcc
cacaagaacgagaaacgcttcaagtgtgaccagtgtgattactgctgcagacaggagcgc
cacatgctgatgcacaggcgcacccacacaggagagaagccttacgcctgtagccagtgt
gagaagaccttccgtcagaagcagctcctggacatgcacttccgccgctaccatgacccc
aactttgtgcctaccgcctttgtgtgcaccaagtgtggcaaggccttcacccgcaggaac
accatggccagacatgcagagaactgtaacggggatcctagtgaaggagagaacggatcc
ccacccaagaaaggacgaggtgggaggaagaggaagatgcgctcaaggaaggacgacgac
gaggatgatgacgatgacgacagtgaggacaatgctgatcctgagctggatgacattgat
gaagaggatgaggaggctgaggcagcattgctggaggaagaggaggaggaggagatagag
ttggagcaggctccacccaccaaacctattcctgcccctgtagagccgcctgtcaagagg
aaacgcggcagaccccccaagaacatccccaaaccctccccacccgccaaagccagcaag
gctgcccccaaagggaaggctgctgcagctgcagccatcgtccaggtggaggaggagaat
accggcgccatagagaacatcatagtgaagaaggagccagaggttgaacaggctgcccca
gaggtggtggtggagcagccagaggaggcgggggtggagacggtggagctgcctgtagca
gacactgcccccaacggagaccttacccctgagatgatcctcagcatgatggaccggtga
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