Salmo trutta (river trout): 115196826 Help Entry 115196826         CDS       T08542                                  Name (RefSeq) protein NLRC5-like isoform X1   KO K22615   NLR family CARD domain containing 5 Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:stru04054]     115196826 Pattern recognition receptors [BR:stru04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    115196826 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  NACHT LRR_6 LRR_4 NLRC4_HD2 Atypical_Card LRR_8 AAA_30 AAA_22 Motif Other DBs NCBI-GeneID:  115196826 NCBI-ProteinID:  XP_029613614 LinkDB All DBs Position 7:7021644..7041646 Genome browser AA seq 1853 aa AA seqDB search MEAEEDVQTVLTQETHELADILSYQDDAVLAILYKMMDSRARERLVRLASHRERILGVLN YFRTTDPAICRQFLQMVCMHCDMPMRLESRLMSVAGSVTSDPWPTPARETLSLCDPEEVI ENNSYTLVDEYIPSQGWCAKRPRIDHVESYKSAVRRFLLQRWERVMQGVVKEVLLEEAWV SLRHRTHVRPRDRADGALSPSELPQGDEEGAVEDRVTVHSLLGSEAQVTLLLGQAGSGKT LLMHCLGQKWTQGAFPSFHLLILLEFRQLNLVARPLSLKELLFRFFLPPEGGEEECTAVL DFILENPEKICLIFDGYDEFHTKITHSGKLSSPLCPLPMAELISGLCSRRILPGCTLLIT CRPRDVTDLESSVDCIGELLGFNQRSVKEYAEQYFQDKGLDLKEKAVSHLLANHHLLTMC YLPALCHICCVCLDHIFSSGGSQLLPQLPNTLTQVYLQILCAFLSRCPGSSTPLLQSHRA EVTLLGRLAMRGLEGSKIVFLSEEVPPDLVDFATKAGLLSQVDLTHEDGSKGQGYTFMHL TMQEFLGALHIMTSEDITDAQLRKKFNFKTRWTTKSDPKTVFTDSLHLYVCGLAAPACSS YLIQLVRGVGAVGWVKKRLALVRKLLRSLAMSTNLTGPKVVELCHCVQETQDAQLAREMV GSRPCFELRNITLNPVDLDALAFVVSSAGVGIGLDFGACSMELECLDILPSCQHIDFLIF RSRKYDDRFADKLSSILPRLPTLKRFEFICGNLTDVGAAKLARALESCPLITELNFSDNS LTDSGVREIADIFPKLPSLASVSLGRNGCSLESIYILLEKITSSPSIQGLYAEGMKDGSV LFVSSLDMKGSKDKTGLTVSLLNCRFTTDQMNRLCQLLARCPGLSVLDLSGGDIKADTLK ALTDSLQELNVSKQIVLNEIPISVDGLMVLTSFLSVCPDVVQVDISLQDPVRASILFAGG IEKQHPEMSKKLCLIGCGLRPPHLDHLCENLTDCSALTLLDISNNSLGNKGLKKLLDLLP QLSTIQEINVSENAVSMEGVVLLADTLCSHRNMSEVNVSHGGKKLFLKFHSSKRIQSEAL RTSPDMEQDKKLSLTHSDVHPTDMTRLCRRLVQCPGLLKLDFSHGSLKDDAIENLLNILP KMTSLQLLNLSHVQMSTDGVLLLVRSLIDCQRVRAVELRPQGEAFIKFVNMKVKQATCRL TQYTLSSGDVEKLSGILEQCPHLSDLDLSSNLLRDEGVKSFVDSLPRLRIASSVNLNDNR LTQMGALYLVNTVTTCEKVAAVEVSLGTEERSLIRFEQDSDCGKTLSLRECHFGADHLQR LAEILTRCAAQLVKLRIRNNGLSVQVIEDLVKQLRCGHVQRYISIEEPWITAGAAVNLVS CCLNLNPNIHTIRINKSTVHITLEECQNPTATSGGTSTDMSSSLSTVTISLVDCAVQGHH LVSLQTVFQSCVLLQELDLSLTSIGRVGAELLCSVLPSLASLRKLSLESKETSEDVVLLL AEGLLQAKSIESLNLSGHVITDRGAVALTRTLQNLPRLRTINLSLCYGWTPAGALELVRG LGQCLSLEGISLDSVQLDEESTVCLAQGLHAMTSLKRLNLNNIVTMVTGSPWEGATLVLL ASLEGLRGMEEIELEGMRMSDKGVEELIKHLPTWTGLRKISLSGNCISDQAGERLVQALT TCTALEELNLSRNNLSLACAVKMGQVLPTLTHFRVLDLSENEIGTKGSVSISKALISMKY LTKIHLTSIGTSELAGLADSLAHCVCAEDVSFAWNDCGDDVAVKLAEVLPQCQKLRRLDL ESNRISTIGAEALARSLQSCPSVEVIRLWRNVISTSDAQKLRQREKRLNFSST NT seq 5562 nt NT seq  +upstreamnt  +downstreamnt atggaagcagaggaagatgtccagactgtattgacacaggagacccatgagctggcagac attctgagctatcaagatgatgcagttctcgccatactctataaaatgatggacagcaga gcgcgggaacggctagtgcgccttgccagccacagagaacgcatcctgggggtgttgaat tacttcaggacaacagaccctgctatttgccgccaatttcttcaaatggtctgcatgcac tgcgacatgccaatgcgtctggaatctcggctgatgtctgtggccggatctgtgactagt gatccttggcctacaccggcaagagagacactatccctctgtgatccagaagaagtcatt gaaaacaacagctataccctggttgatgagtatataccatctcagggttggtgtgcaaaa cgcccacgaatagaccacgtagaaagctacaagtctgctgtgaggagatttctactgcag aggtgggagagggtgatgcagggtgtggtgaaggaggtccttctggaagaggcctgggtc agtctgcgccacagaacccatgttagacccagagacagggctgatggagctctgagcccc tcagagcttccgcagggggacgaggagggggctgtggaggacagggtgactgttcactcc ctcctgggttcagaagcccaggtcacactgctgttaggccaggcagggtcagggaagaca ctactgatgcactgccttggccagaaatggacacagggcgcctttccctcctttcaccta ctgatcctgctagagttccgccagctcaacctcgtggctcggccgctctctctgaaggag ctgctctttcgcttcttcctcccaccagagggtggggaggaggagtgtaccgctgtactt gacttcatccttgaaaaccctgagaaaatatgcttgatctttgatggctatgacgagttt cacactaaaatcacccactcagggaaactgagcagcccattgtgcccgctccccatggca gagctgatctcaggcctgtgcagtcgcagaatcctcccaggatgcactctgttgattacc tgtagacctcgggatgtgacagacttggagagctctgtggactgcattggggagctgcta ggcttcaaccagcgcagtgtgaaagaatatgctgaacagtacttccaggacaagggtctg gatctgaaggagaaggcagtgagtcatctactggccaaccaccacctcctcaccatgtgt tacctgccagccctctgccatatctgctgtgtgtgcctggaccacatattctccagtggt gggtctcagcttttaccccagcttccaaacaccctcactcaggtctacctccagatcctc tgtgcctttctgagccgatgcccagggagcagcacacccctgttgcagagtcacagggca gaggtcacactgctgggccgcctggccatgaggggcctggaggggagcaagatcgtgttc ttgtctgaagaggttccaccagacctggtggacttcgccactaaggctggtctcctctca caggtggacctgacccatgaggatggatctaaaggccagggctacacattcatgcacctc accatgcaagagtttctgggcgcgctacacatcatgaccagcgaggacatcacagatgcc cagctcaggaagaagttcaacttcaagacccgctggaccacgaaatcagaccccaagacg gttttcactgactccctccatctgtatgtttgtgggcttgctgcaccagcctgctcctcc tacctgatccaacttgttcggggagtgggggctgtggggtgggtgaagaaacgcctggca ctagttcgcaagttgctccgaagcctggcaatgagcaccaacctgactgggcccaaggtg gtggagctgtgccactgtgtccaggagacccaggatgcccagctggccagggagatggtg gggtcacgtccctgctttgaactaaggaacataacattgaaccctgttgatctggatgct ctggcctttgtcgtctcgtctgctggagtgggcatcgggttggactttggagcctgttct atggagctggagtgtctcgatattctacccagctgccagcacatcgactttctaattttt cgaagccgtaagtatgacgacagatttgcagataaactttcttccatccttcccagacta ccaaccctgaaaagatttgagtttatctgtggtaacctcactgatgtgggagctgccaaa cttgccagagccctggagagctgtccactgatcacagagctcaatttcagtgacaacagc ctgacagacagcggagtcagggagattgctgacatctttcccaagctgcccagtctggcc tctgtctcgttggggaggaatggctgctctctggagagtatctacatccttctagagaag attacttccagcccctccatccagggactctatgctgagggaatgaaggacggcagtgtc ctgtttgtctcaagcttagacatgaaaggttctaaggataaaactggactgactgtcagc ctgttgaactgcagattcactactgaccagatgaacagactgtgtcagttgctagcgaga tgtcctggcctctctgtcctggatctctcaggtggcgacatcaaggctgatactctcaag gccctgactgactctctacaggagctgaacgtctccaaacagattgttctgaatgagatt cccatatcggttgatgggttgatggttctgaccagtttcctgtctgtatgtcctgatgtg gttcaagtagacatcagcctgcaggaccctgtgcgtgcgtccatactttttgctgggggg atagagaaacaacatcctgagatgtctaagaaactttgtctgattggctgtggtcttcgt ccccctcacttggaccatctgtgtgagaatctgacggactgctctgctctgactctgctg gatatttccaacaattctctgggaaacaaaggtctaaaaaagttgttagacctcttacct cagcttagcaccatccaggaaatcaatgtcagtgagaatgcagtcagcatggaaggggtg gtgctgctagctgacacactctgctcacacaggaacatgagcgaagtgaatgtcagtcat ggggggaagaagctgttcctgaaattccattccagtaaaagaatacaatcagaagcactc aggacctcaccagatatggaacaggataagaaactcagcctaactcacagtgatgtccac cccactgacatgaccaggctgtgtagaagactggtacagtgtcccggcctactgaagcta gatttctcccatggatccctcaaggacgatgccattgaaaatctattgaatatcctgcct aagatgacatctcttcagctgctcaatttgagccatgtccagatgtctacggacggagtg ttgttattggtcagatctctgatagactgtcagcgtgtcagagctgtggaactcaggccc caaggagaagcgttcatcaagttcgtcaacatgaaagtaaaacaagcaacttgcagactc acgcagtacacactgagcagtggagatgtggagaaactctctgggatcctggagcagtgt cctcatttgtctgacctggatttatccagtaacctcctgagagacgagggagtgaagagc tttgtggattctctgccaaggctgcggattgccagctcagtgaatcttaatgataacaga ctgacccagatgggggcgctctacctggtgaacacagtgacgacctgtgagaaggtggct gcagttgaagtcagtttgggaactgaggagaggtcgctcatccgctttgaacaggacagt gactgtggcaaaactctgagtctgagagagtgtcattttggggctgaccatctgcagaga ctagcagagattctgacacgctgtgctgctcagttggtcaaactgaggataagaaacaac ggactgagtgttcaggtgattgaagacttggtgaagcagctgaggtgtggtcacgtccaa cgctatatcagtattgaggagccatggatcacagcaggagcagctgtaaacctggtctcc tgctgcttgaacctgaaccccaacatacacaccatcaggataaataaatccactgtacac attactttggaagaatgccaaaatcccactgctaccagtggtggcacttctacagacatg tctagctctctgtctaccgtgaccataagcctggtagactgtgcagtgcaagggcaccac ctagtgtctctgcagactgtgttccagagctgtgttctgctacaggagctagatttgtca ttgaccagcattggtagagtgggagcagagttgctctgctctgtcctaccatccttagct agtctgaggaaactcagtcttgaatcaaaagaaacctctgaagatgtggtattgctcctt gccgaggggttgttgcaggctaaaagcattgagagcttgaatttgtctggtcatgtgatt actgacagaggagctgtagctctgaccagaacactccaaaaccttcctcgtctcagaaca atcaatctgtccctctgctatggttggacaccagcaggggccttggagctggtgagaggg ctgggacagtgcctctctctggaagggatcagccttgactctgtacagctggatgaggag agcacagtgtgcctggcccaagggctccatgctatgacctccttgaagaggctgaatctg aataatatagttaccatggtgactggatccccatgggagggggccactctggtcctgctg gcctctctggaggggctcagagggatggaggagatagagttggaggggatgaggatgtca gataaaggagtggaggagcttatcaaacacctgcccacctggacaggcctgaggaagatc agcctatcagggaactgcatcagtgaccaagcaggagagaggctggtccaggccctgaca acctgcacagcactggaggagctcaatctgtccaggaataatctcagccttgcctgtgct gtcaagatgggacaagttctgcccactctcactcacttcagggttctagatctctcagag aatgagattggtacaaaaggatctgtcagtatctccaaagccttgatctccatgaagtat ttgacaaagatacacttgacctccatagggacttcagagcttgctggtctggctgacagc ctggctcactgtgtctgtgcagaggatgtcagttttgcgtggaatgattgtggagatgat gtcgcagtgaagcttgccgaggttttaccacaatgccagaagctaaggagacttgatcta gagtctaacagaatcagcactattggagcagaggcacttgccagaagcttacagtcttgt ccatcagttgaagtgatcagactgtggaggaatgttatttctaccagtgatgcccagaaa ctgagacagagagagaagaggctcaacttctcctccacatag

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