Salmo trutta (river trout): 115196834
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Entry
115196834 CDS
T08542
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115196834 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115196834 (exosc6)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115196834 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115196834
NCBI-ProteinID:
XP_029613632
Ensembl:
ENSSTUG00000012769
UniProt:
A0A673Y4Y9
LinkDB
All DBs
Position
7:complement(7143819..7145421)
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AA seq
277 aa
AA seq
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MPTDTKRVRGPEVSQSPSLFLCKTAVKKPTASNDARVDGRQRGQVDVRSVFVRCGLISQA
KGSAYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEK
DLSLMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLV
LGCSIRQEGATYLIDPTFLEENGCNLASGSRENLGSLTVAFLPSLNQISGLQSDGEMGED
TLTGGVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaccgcggtaaagaagcccaccgcttccaacgacgccagggtagatggcagg
cagcgtggtcaagtggatgtccgttcagtgtttgtccgatgtgggctgataagtcaagcc
aaaggttcagcttacattgaagctgggaacacgaagctgatctgctgtgtgtatggaccc
agagagactgagcgcaaggatgagaccgatatgaaatccggaagactgattactgacatg
agatttgccccattctcttgtcgagagagaggctcgtggattcaaggtagtgatgaaaag
gatctgtcactgatgctattggagagcctgaggccaggagtgtgcttgcagaagtatcct
cgctctcagattgaagtaaatgtgatggtccttgaaaacgacggcgccgtcctggcacat
gcagtcacctgtgcgtccatggcgctggcagacgcaggtatagagatgtacgatctggtt
cttggatgctcaatccgtcaggaaggtgccacataccttatcgaccctacctttctggag
gaaaatggatgcaacttggcctcaggatccagggagaatttgggaagcctgacagttgca
tttctgcccagtctgaaccagatttctggactacaatcggatggcgagatgggcgaggac
accctgactgggggtgtgcgcacatgcattgaggggtgtttcaaactctaccctgtcatt
cagcaagcactgtccaaggcagtacgaagaaaagcaccaccatcagagagctga
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