Salmo trutta (river trout): 115196839
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Entry
115196839 CDS
T08542
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04115
p53 signaling pathway
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115196839 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115196839 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115196839 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
115196839 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115196839 (siah1)
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115196839 (siah1)
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115196839 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
115196839
NCBI-ProteinID:
XP_029613638
Ensembl:
ENSSTUG00000015386
UniProt:
A0A673YNS8
LinkDB
All DBs
Position
7:complement(7321455..7341814)
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AA seq
335 aa
AA seq
DB search
MSGRANVQPMNSWKGVLKLFTCIASRTTTNKPKELPTFQEKKKALFGNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgttcagcccatgaactcatggaagggggtgctcaagctcttc
acatgcatagcttctagaacaaccaccaacaaacctaaagagttacccacatttcaagag
aagaagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgtgccccctcccagcgcgtccccaccttgtccggc
actacggcctctaacagcgacctagccagcctgtttgagtgccccgtctgctttgactat
gtgttgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccgaccc
aagctcacctgctgccccacctgccggggcccgctgggctccatcaggaacctggccatg
gagaaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgcgaggtg
acgctgccccacacagacaaggcagagcacgaggagctgtgtgaattccgtccgtactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttcctggct
acagacattaacctgcctggggcagtggactgggtcatgatgcagtcctgcttcggtttc
cacttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcagttctttgcc
atcgtgcagctgatcggcacgcggaagcaggcagagaactttgcctaccgcctggagctc
aacgggcaccggcgacggctcacctgggaggccacgccccgctccatccacgagggcatc
gccactgccattatgaacagcgactgcctagtgtttgacacctccatcgcgcagctgttt
gctgagaacggaaacctgggcatcaacgtcaccatatccatgtgctga
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