Salmo trutta (river trout): 115196908
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Entry
115196908 CDS
T08542
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115196908
04020 Calcium signaling pathway
115196908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115196908
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115196908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115196908
NCBI-ProteinID:
XP_029613822
LinkDB
All DBs
Position
1:complement(62852703..62997989)
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AA seq
2510 aa
AA seq
DB search
MARFENEMPSRYGGGHGPGHGHGPGGPGRGGSRQGGPPGGPGGQRVYKQSMAQRARTMAL
YNPIPVRQNCFTVNRSLFIFSEDNFVRKYAKKITEWPPFEWLILATICANCIVLALEQHL
PDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKNSYIRNGWNAMDFVVVCTGI
LSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFA
IIGLEFYMGKFHTTCFDIHTDEIREEFPCGTEAPSRLCPNGTTCRKYWLGPNYGITQFDN
ILFAVLTVFQCITMEGWTDLLYYSNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSGEF
AKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILADDEDPDAFDGTRRRPTIK
NHKNKTDLLNPEDGNGDLAVGSPFARASLKSSKLEGSNFHKRERRLRFFIRRIVKTQYFY
WSVLCLVGLNTMCVAVVHYDQPEPLSDFLYFAEFVFLSIFMSEMGIKIYGLGSQPYFHSS
FNCFDCIVICGSIFEVLWGFIQPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNS
MKSIISLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPTNFDTFPAAIMTVFQILTGEDW
NMVMYDGIESQGGVNNGMVFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEE
EAASKKNALQKAKEVAEVSPQSAANLSIAAEKVNSTGHNASDPFLDCKEQQKNNKGGNKS
VWEQRTKELRKQTLMTSREALYNELDPEDRWKVNYSRHIRPDMKTHTDRPLVVDPQENRN
NNTNKTTKEPDPRLSQQHADKLLRKQTHVHERGGGGGGGGGSGSGSGPGRPYERADSTES
RRSRKESKEHQELQHHHSSHTRLDATMLGQSGEERPQRRHHHPRGQAGSSEHRKPRQHRM
PPEDEEGGGGGGGGGGGGGERRHKSRGTEGEGEGEQEGGDGGERRQRRHRHGTQSGCDGE
GKRTRPHRRKDGPNLSTTRPIQKSLCRQDSQYSEDMDNVMNSKLATSQPQLPPGSTQQPC
PASGLPSPANHTTPGPGFGPAGLNTHLTNSSSHLGPGGSLVPAYGSSTRIPDHTAVDIPP
MFPSHNAILQVNRNANTEPLPKKEDKDDDDDDKGDEDGPKPMPPYSSMFILSTTNPFRRL
CHYIVTLKFFEFGILSTIAMSSIALAAEDPVWPESPRNNVLRYFDYVFTGVFTFEMLIKM
VDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTSSSGGSSKGKDISTIKSLRVLRVLR
PLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKE
FERDCRGEYLVYERNNEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVD
ATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNE
RGCIDFAINAKPLTRHMPKNKQSFQYRMWEFVVSPPFEYTIMAMIALNTIVLMMKYDGAS
PAYEAVLANLNIVFTSLFSMECVLKIIAFGVLNYFKDAWNIFDCVTVLGSITDILVTELG
MNNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIGMLFFIYAIIG
MQLFGNIGMEEEEGSAINEHNNFRTFFQALMLLFRSATGEAWHDIMLSCLGGKLCDPLAG
NTEPECGSQFAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIW
AEYDQAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVADDNSVHFNST
LMALIRTALDIKIAKGGVDKHQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKI
YAAMMIMEYYRQSKAKRSQARLEAEQNRTTLLFQRVEPPSPIQDGPLSLPPTQPADPVNS
LPVEGGVPDSQSWVTVRAQEMSQRVGSWSPEGQHSEDGLDSRHNSQTVEMREMGRDGYSD
TEHFQPMEGHGRAASMPRLPGDNQQRRKGRQRGNNLSTITDNSPMKRSASSLGHSRSGRG
KTERGGADEYAMEYVIPEEGGAPRHSHRRRDRSHRASERSLCRYTDADTAGLGTDLSTTT
QSGDLPPKEKDRDRDRDRGRQKDRKHHHHHHHHHSGSVDKERYTPDRADRGGEHGGHRQP
RGDRDHDRDREHDRRWSRSPSEGRECMTHRQGSSSVSESPAPSTSGTSTPRRGRRQLPQT
PATPRPHVTYSPVVRKAMATPPGAQPLGRNPAPVPRRFSPEPPQGPPPPHHGSPNQACHP
PPRWGDGGGGGGESGSLEGDGCFYNQDYQDYDREHHKPPPYEQSPTQGNPHKPHPLNHPT
LPLQNHPPTPQQQHPINPHPNNPHPNNTHSRTSPRTSRHAPPPNTTPTPQGQQPPPPRRL
PNGYRASSPSSQHHHGPTHPGPHKVPPPQPRGPRTKGLHEPYNNTDDNRC
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcgaaaacgagatgccgtccaggtatggcggcggccatggaccagggcat
gggcatggacctggaggtcctggccgcggcggcagccggcagggcggcccgcctggaggc
cccgggggccagcgggtctacaagcagtccatggcgcagagagcccggaccatggccctg
tacaaccccatcccggtgcgtcagaactgcttcaccgtcaaccgctcgctgttcatcttc
agcgaggacaactttgtgagaaaatacgccaaaaagattacagaatggcctccgtttgag
tggttgatcctggccaccatctgtgccaactgtatcgtcctggctctggagcaacatctg
cctgatggagacaagactcctctgtctgaacgcctggatgacactgagccctacttcata
gggatcttctgttttgagtcaggcattaagatcctggctctaggatttgccttccataag
aactcctacataaggaacggatggaatgccatggacttcgtagtagtatgcacagggatc
ctgtctacagtgggatcggacttcgatttgcggactctgagagcggtccgtgtgctgaga
cccctcaaactggtgtctgggatacccagcctccaggtggtcctcaagtccatcatgaag
gctatgatcccactgctgcagatcggcctgttgctattcttcgccatcctcatgttcgct
atcatcggcctggagttctacatgggcaaattccatactacctgcttcgacattcacaca
gatgagattcgcgaggagtttccgtgtgggaccgaagccccgtcgagactatgtccaaac
gggaccacgtgtcgaaagtattggctggggcctaactacggcatcacccagtttgacaac
atcctgtttgccgtgctcacagtcttccaatgtattaccatggagggatggactgacctg
ctctactatagcaacgatgcctcagggagcgcgtggaactggatgtacttcattcccctc
atcatcatcggctctttcttcatgttgaacctggtcctgggtgtactgtctggggagttt
gccaaagagagagagcgagtggagaacaggagtgagtttctgaagctgaggagacagcag
cagatagagagagagctcaatggatacctggagtggatttgtaaagcagaagaagtgatc
ttagcagacgatgaagaccctgatgcctttgacggcacccgcaggagacccaccatcaaa
aaccacaagaacaaaacagatctccttaacccagaggatgggaatggagacctggcagtg
ggttctccctttgcgcgggccagtctgaagagttcaaagctggagggctctaacttccat
aagagggagcgtcgtctgcgtttcttcatccgacgcattgtgaagacccagtatttctac
tggagtgtactgtgtctggtgggacttaacaccatgtgtgtggctgtagtacactacgac
cagcctgaaccactctcagacttcctctactttgcagagttcgtcttcttgagtatcttc
atgtctgagatgggtataaagatttatggactggggtcacagccttactttcactcctcc
tttaactgctttgactgcattgtaatatgtggcagcatattcgaggtgctgtggggtttt
atccagcctgggacatcctttggtatcagtgtgttacgagctctaaggttactgagaatc
ttcaaagtcaccaagtactgggcgtctttgaggaacctggttgtatctctgctcaactcc
atgaaatccattataagcctgctcttcctcctcttcctctttatcgtcgtcttcgctctg
ttgggcatgcaactcttcggaggacagtttaattttgaatctggcactcccccgaccaac
tttgatactttccctgcagcaataatgactgtgttccagatcctgaccggagaagactgg
aacatggttatgtatgatggaatagagtctcagggaggagtcaacaacggaatggtcttc
tcagtcttcttcatcgtgctcacacttttcggcaactacactctgctgaatgtgttcttg
gccattgctgtggacaatctggccaatgcacaggaactcactaaggacgagcaggaagag
gaagccgcttccaagaaaaatgctttgcaaaaagccaaggaggtggccgaagtcagccct
cagtctgcagccaacctgtccatagcggccgagaaagtaaacagcacaggtcacaacgct
tccgacccctttctggactgtaaggagcagcagaagaacaataagggtggtaataagtct
gtgtgggaacagaggaccaaggagctgaggaaacagactctaatgaccagcagagaggcc
ctctacaacgaactggacccagaggaccgctggaaggtgaactactcccgccacatccgt
cctgacatgaagacccatacagaccgccctctagtggtggacccccaggagaaccgcaac
aacaacaccaacaagaccaccaaagagcctgacccccgcctcagccagcagcatgccgac
aagctgctccgcaagcagacacacgtccacgagagaggaggtgggggaggaggaggtggg
ggctcagggtctggttcaggccctggaaggccctacgagcgggcagactctacagagagc
cgcaggagccgtaaggagagcaaggagcaccaggagctccaacaccaccactcctcccat
acccgcctagatgcaacgatgctgggacagagtggagaggagaggccccagagaaggcac
caccacccacggggccaggcgggctcatcggagcacaggaaaccccgccagcaccgcatg
cccccagaggacgaagaggggggaggtggaggtggtggaggaggaggaggaggtggggaa
aggcggcacaagagcagggggacagaaggagaaggcgagggggagcaagaggggggtgat
ggaggtgagaggaggcagagacggcatcgccatggcactcagtcggggtgtgatggtgaa
gggaagaggacgcggccacaccgcaggaaggatggtcccaacctgtccaccacacggccc
atccagaagagcctctgtagacaggacagccagtacagcgaggacatggacaatgtcatg
aacagtaaactggccaccagccagccccagctacccccaggctccacccagcagccctgc
ccagcctcgggcctccccagcccagccaaccacactactccaggcccaggcttcggccct
gcaggcctcaacactcacctgaccaacagcagctcccacctgggcccaggtggaagcctg
gttcctgcatacggaagtagcacccggataccggaccacacggctgtggacataccaccc
atgtttccttcccacaacgccatattgcaggtcaataggaatgctaacacggagcctctg
cctaagaaggaggataaggatgatgatgatgatgacaagggtgatgaagatggacccaaa
ccaatgcctccctatagctccatgttcatcctctctaccaccaacccgttccggagacta
tgccactacattgtgaccctgaaattctttgagtttggtatcctgtctaccatcgctatg
agcagtatcgccctggcagcagaagaccccgtctggccagaatcacctcgcaacaatgtt
ctgcgctactttgactatgtgtttacgggagtgttcacctttgagatgttgattaagatg
gtggatctgggcctggtgttgcaccagggctcctatttccgtgacctgtggaacatcctg
gactttatagtggttagtggtgctctggtggccttcgccttcacgagcagtagcgggggg
agcagtaaagggaaagacatcagcacaatcaagtctctgagggttctgagagtgttgcga
cctctgaagactatcaagcgtcttccaaagctcaaggctgtgtttgactgtgtggtcaac
tccctgaagaacgtcctgaacatcctcatcgtctacatgctcttcatgtttatatttgct
gtggtggccgtgcagctgttcaaaggaagattcttcttctgcactgacgagtccaaagag
tttgagcgcgactgcaggggcgaatatctagtctatgagcggaataatgaagtgaaggcg
cagaagcgggagtggaagaagtacgatttccactacgacaacgtgctttgggccctgctc
accctcttcaccgtgtctaccggagaggggtggccgcaggtgctgaaacattcagtggat
gcgacctatgagaatcagggcccgagcccggggtaccggatggagatgtccatcttttac
gtggtgtacttcgtggtcttccccttcttcttcgtcaatatcttcgtagctctcatcatc
atcactttccaggagcaaggagacaagatgatggaggattacagtttagagaaaaacgag
agaggctgcatagacttcgccattaatgccaaaccgttgacgcgacacatgcctaagaac
aagcaaagcttccagtatcgcatgtgggagtttgtggtgtcgccgccattcgagtataca
atcatggctatgatcgcactcaatactatcgtactgatgatgaagtatgacggagcctct
ccggcctacgaggctgtgctggccaacctgaacatcgtgttcacctcgctgttctccatg
gagtgtgtgctcaagatcatcgcctttggagtgctgaattacttcaaagatgcctggaac
atttttgactgtgtgacagtcctgggcagcattacagatattttagtgactgagctcggg
atgaataacttcatcaacttgagtttcctgagactgttcagggctgccaggctcatcaaa
ctgctccggcagggagagaccatccgcatcctgctctggacctttgttcaatccttcaag
gcgctgccgtacgtgtgcctgcttatcggcatgctgttcttcatctatgccatcatcggg
atgcagctgtttgggaacattgggatggaggaggaggaggggagcgccatcaacgaacac
aacaacttcaggactttcttccaagctctcatgctgctcttcaggagtgccacgggcgag
gcgtggcatgacatcatgctgtcgtgtcttggagggaagctctgtgatcctctggcaggg
aacactgaaccagagtgtggcagccagtttgcctacctctactttgtgtccttcatcttc
ttctgctccttcctgatgctgaatctgttcgtggctgtcatcatggacaactttgagtac
ctgaccagagactcctccatcctcggcccacatcatctagacgagtatgtcaggatatgg
gctgaatatgaccaagcagcttgcggtcgcattcattataaggatatgtacagtttattg
cgagttatcgacccgcctcttggcttaggaaagaaatgcccccatagagtggcctgcaag
aggctgctgcggatggacctcccagtcgccgacgacaactcagtccacttcaactccacc
ctgatggccctgatccgcacggcgctggacatcaagatcgccaagggaggtgtggacaaa
caccagatggatgcagagctgaggaaagagatgatggcgatttggcccaatctctcccag
aagaccctggacctcttagtcacgccacataagtcaacagacctgacggtggggaagatc
tacgctgccatgatgattatggagtactacaggcagagcaaggccaagcgctctcaggcg
cggctagaggcggagcagaatcgaacgacattactgtttcagcgcgtggagccgccctcc
cccatccaggacgggcctctcagcctccctcctacccaaccggcagaccccgtcaacagc
ctaccggtggaggggggggttccagacagccagtcgtgggtgacagtgcgggctcaggag
atgtcccagagagtaggcagctggagtcctgagggacagcactctgaggatggcctggac
agcaggcataactcgcagacggtagagatgagagagatggggcgtgacggttactcggat
actgagcactttcagccaatggaaggccacggaagggccgcttccatgccacgccttcca
ggcgacaaccaacagcgaaggaaagggaggcagcgtggaaataacctcagtactataaca
gataatagtcctatgaagcgctcggcctcctcccttggtcacagtcgatctgggagggga
aagacggaaaggggaggggccgatgagtatgcaatggagtatgtgatcccagaggagggc
ggagcaccgaggcacagccaccggcgccgcgaccgaagccaccgggcctctgagcggtca
ctgtgtcgatatacagacgcagatacagcaggactgggcacagacttgagcaccaccact
cagtcaggtgacctgccacccaaggagaaggaccgtgaccgcgacagagaccgcggtcgg
cagaaagaccgcaaacaccaccaccatcaccaccaccatcacagcggctctgtggacaag
gagcgctacacaccagaccgcgccgaccgggggggagagcacggtggtcacagacaaccc
cgaggagacagagaccacgaccgggatagggagcacgaccgtcgctggtcacggtcaccc
agcgagggcagagagtgcatgacacacagacagggcagtagttcggtgagcgaaagtccc
gctccctctacctcggggaccagtaccccgagacgaggccgtcggcaacttcctcagacc
ccggcaacgccccgcccacatgtcacctactctcctgtcgttcgtaaagccatggccaca
cctcctggagcccagcccctggggcgcaatcccgcccccgtccctcgccgcttttcccct
gagcccccccagggacctcccccgccccaccatggctcacccaaccaagcctgccacccc
cctccccgctggggggacgggggaggaggaggaggagagagtgggtcgctggagggcgac
ggctgcttctacaaccaggactaccaggattacgaccgtgagcaccacaaaccgcctccc
tatgagcagagccccacacagggcaaccctcacaagcctcaccccctcaaccaccctact
ctccccctgcaaaaccatcccccaaccccacagcagcagcaccctatcaacccgcaccca
aacaacccacaccccaacaacacccactcccgcacctcgcccaggacttcccgccacgcg
cccccacccaacaccacccccaccccccaagggcagcagcctcctccccctcgacgcctc
cccaacgggtaccgcgcctcctccccctcctcgcaacaccaccacggccccacccacccc
gggccccacaaggtcccccctccccagcctagagggccccgcacgaaaggcctgcacgaa
ccctacaacaacacggatgacaacaggtgctag
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integrated database retrieval system
