Salmo trutta (river trout): 115196927
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Entry
115196927 CDS
T08542
Name
(RefSeq) DET1 homolog isoform X1
KO
K10571
de-etiolated-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115196927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115196927
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115196927
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GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
115196927
NCBI-ProteinID:
XP_029613815
Ensembl:
ENSSTUG00000014494
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All DBs
Position
7:10806908..10825477
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AA seq
551 aa
AA seq
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MEDDSPTLKPRRIQNQNVVHRLERRRIFSGRAAAHWYRGRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCHAAEDLLLGQDGETLANGNDQRSLNICGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPSPHFFEVYRNNESV
TPNPRSPLEDYSLHVIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTSEGLFLDVRTIGRFCYEDDLLTLSAVYTEARAEGQPGFSRLYKEKTINSLKHRLL
VYLWRQAEKDGSATAKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVLAVFENTSDKLLALFEDFCDLFRNASLHSEAVQFPCSASSNNFAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgattccccgactctgaaacccaggcgcatccagaaccagaatgtggtccat
cgactggagcggcggcggatcttctctggccgggctgcagcccactggtaccgcgggcgc
tgcttccaccagaaccttttcccaaacttcactgtggtaaatgtagagaagcctccttgc
ttcctacgcaagttctccccagatggacgctgcttcatagccttctcctctgaccagacc
tccctggagatctatgagtaccagggctgccatgcagcggaggatctgctgctggggcag
gatggggagaccctggccaacggcaatgaccagcgctccctcaacatctgcggccgcctc
tttgagcgcttcttttccctcctgcacgtcactaacgtggcttccaatggagagcacctg
aaccgagagtgcagcctgttcactgatgactgtcgctatgtgatcgtgggttcagcggtc
tacgtgcccgaggagccctctccacacttctttgaggtgtaccgcaacaacgagtctgtg
actcccaaccctcgctctcctctggaggactactcactgcacgtcattgacctgcacact
ggccggctttgtgacaccaggtccttcaagtgtgacaagatcatcctctcgcacaaccag
ggactttacctctaccgtaacatactggctgttctttctgttcagcagcagacaatccat
gtctttcaggtgacatcagaggggttgtttctggacgtgcggaccatcggtcggttctgc
tacgaggacgacctcctgactctgtctgcggtgtacactgaggcccgggccgagggccag
ccaggcttctcccgcctctacaaggagaagaccatcaactccctgaagcacagactactg
gtctacctgtggagacaggctgagaaggacggcagcgccaccgccaagcgacgcttcttc
cagttctttgaccagctgagacagctgaggatgtggaagatgcagctgctggatgagcac
cacctcttcattaaatacaccagcgaggatgtggtcaccctgcgagtcactgacccctcc
cagccctcattctttgtggtgtacaacatggtgtcgacagaggtgttggcagtctttgag
aacacttctgacaaacttctggcgctgtttgaggacttctgtgacctgtttcggaacgct
tcgctccacagcgaagctgttcagttcccctgctcagcctccagcaacaactttgcacgg
caggttcagagaaggttcaaagacaccatagttaatgcaaagtacggcggtcacactgag
gcggtgaggaggctgctgggacagctgcccattagtgcccagtcctacagcagcagcccc
tacctggatctttccctcttcagctacgacgacaagtgggtatctgtgatggagcggccc
aaaacatgtggagaccaccccatccgattttatgctcgggattctggattgctgaaattc
aagatccaggcaggcctgctgggccggcccattaaccatgcagtccggcggctggtggca
ttcacattccacccctttgagccattcgccatctcagtacagaggaccaacgctgagtat
gtggtgaatttccacatgcggcacgtctgtgtatga
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