Salmo trutta (river trout): 115196954
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Entry
115196954 CDS
T08542
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115196954 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115196954 (tubgcp6)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
115196954 (tubgcp6)
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
115196954 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
115196954
NCBI-ProteinID:
XP_029613876
Ensembl:
ENSSTUG00000024871
LinkDB
All DBs
Position
7:complement(12595822..12624578)
Genome browser
AA seq
1892 aa
AA seq
DB search
MYSSPDVCLKSGSHNSSSNSNSITELLGSLCDSSLTGVSWKRRALGGVSREGVRRTLRKR
AYGALLSKVFQEGSPKGFLSVPSATSTTPPRNKLLMISFDLRVAGCQDEAERLEEQLGRL
SEGPASGLKELDSVLELLVQLTGSAPPPPASFSRDYMRRERPVLRRPPLGGYQSEELQRL
EARAWALMCGEEWGSLKGLCGTLGLMDAPPGTGLLALRRRSDVEERFEKETRMSLFGALQ
HSRTSDLDIRLNLPPVPSNADVTGLAIRVPPCLDQLEDEGFQSASNLTPDSQSEPSPSPE
LDVWDALRTFEPGRRRCWESVGCPPGKREFPYLTEGGREAFDQLYRLWEGEMRVVCSAPP
SPLLPLPLDCQTQLVSDLLNVLIGVASTTFPLNQVCVNFDVRPGVCVSGASPESVSRLLG
ELAQYGTHYLRLSRFVLQSAQKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFL
FRKVGRQLRYLSELCCVDGASGVGQATFPVGVTLLSYLYNEAQSNCSNENYPVLLSLLKS
SCEPYTRFVSDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWVQGYTLISRDVEDCVPVF
LRHIANDVYVCGKTINLLKICCPQHYICWSELPMPRIAVTFSLQEVEEIERDCAVYRGRM
ERIAKHSATSREEQALRTEQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKRERFE
ELRQHLEQEQEWHSLARRKEQEDEFSFARELRDREKRLQALEEQLEIRARKELIAQYSHL
SEEAAKREWQAMWRVQRMRLDDSRAQFLLQDQQETEAILEKYPVGGQRPPLEILQPAPAQ
TAQPLAQQSLSPEPCEQQSEEPTQAPLHHQSTPLAPPTAKLDLTLVSEHINANDFLPKPA
DSLQVDQALQEIGSDLPEDPAPHKPVDYDFSAPYSPLEGVTAPALARPRWGPVVQPDMAH
PHIPTGPPESTLGMGCVVSGTLALPSPLPGSTYGHSSDSTMGVGCVVSGAEVLPRPSPHG
QASQSSIPLGQYSSDVPLALHTANVHGHPSQTTVQLADESQAKQMDSRQENTEDPSPPGG
MVKEAEGTVEASCLVEMKPAEMEKLDHVGAEEQMAGSLREASASSTPEQGHDSGYHPGQA
SPSLSGPSSVSELPTANIQGHASDAHIKVGEHVSDVEAPLPSQNVHGHSSDANIKVGEFV
SEMTAPLPTANVHGHASDAHIKVGEHVSEVVASLFTQNIHGHASDSHIKVGEHMSEEVAS
IHTQNIHGHSSDTHFKAGEFVLDAEPSRPRWSKHGHASDCTLQVGCVMSGTEPVLSPLPG
STYGHSSESTLGIGCVVSGVEPLHAPLPGSDFGHASDSTLGGGCVVSGTVTLPSPIPGSD
YGHSSDSAMGGGCVISGIEPVRAPLPGSNFGQSSDSTLGTGCVVSGVNPLPSPIPGSTYG
HSSDSALGGGCKVKETGNEYDARTLEQQRLAEGISSWAAGLALSPGESSEREYLSSLAAQ
YQVEQYEDCYGLMTLAPECHPLHQVTRGPWGLPVDPSLRRATDTTVVQLSGMVSLPVLMK
HSVTTPLITHVSLVNKAVVDYYFVELGVERHFEALRHFLLMEDGEFAQSLSDLIFEKMGS
GQTPGELLTPLVLNSILSKALQYSLHGDSSLAPNFTFALRFLPETFHPHAPDALNCLELR
YKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKRTALVKGAGRSVQFRQ
LQLYRHEMQHFVKVIQGYIANQILQVSWLEFTTKLASASDLDAIHRIHADYLNRAIFRGL
LTEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSQQGEAVHPSFIAMQQSYNTFKYYSHFL
FKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagcccagacgtctgccttaaatctggcagtcacaacagcagcagtaacagc
aacagcatcactgaactcctgggctccctgtgtgacagcagcctcactggggtgtcatgg
aaacgtcgtgctctaggaggggtgtcccgagagggggtccgccgcaccctcagaaagcgt
gcctacggggccctgctgtccaaagtgttccaggagggctccccgaaagggttcttgtca
gtaccaagtgccacgtccaccaccccgcccagaaacaagctacttatgatatcctttgac
ctgcgagtggcggggtgccaggacgaggccgagaggctggaggagcagctggggaggcta
agtgaggggcccgcatcgggtctgaaggaactggactctgtgctggagctcttggtgcag
ctgactggctctgcacccccacccccggcctccttcagcagggactacatgcgcagggag
aggcccgtgctgaggaggcctccactgggggggtaccagagtgaggagctgcagaggttg
gaggcccgagcctgggccctgatgtgtggggaggagtggggatccctgaagggtctgtgt
gggactctgggtctgatggatgctcctccgggcacaggcctgctggcactgaggaggagg
tcagacgtagaggagaggtttgagaaggagaccaggatgtctctgtttggagccctgcag
cactcccgtacctcagacctggacatcaggctcaatctgcctcctgtgcccagcaatgct
gatgtcactgggctagccatacgggtgccaccttgtttggaccagttagaagatgagggc
ttccagtcagcctccaacctaaccccagactcccagtcagagcccagccccagcccagaa
cttgatgtctgggacgccctgaggacttttgagcctgggagacgtcgctgctgggagtct
gttggctgcccaccagggaagagggaattcccctacctgacggaggggggcagggaggct
tttgatcagctctacaggctgtgggagggggagatgagggtggtctgctctgcacccccc
tcgcccctcctgcccctgcctctggactgtcagacccagctggtcagtgacctacttaat
gtattgattggggtggcgtctactaccttccccctcaaccaggtgtgtgtaaattttgac
gttcgacccggagtgtgtgtgtcgggagcgtcaccggagagtgtgtctcgtttgcttggc
gagctggctcagtatggcacccattacctgaggctcagccgcttcgttctgcagagtgcc
caaaagagaggcctggtgttccaggcgtttacaggtgggctgcgtaagtacctgcattac
taccgggcctgtgtcctcagcacccctcccacccttagcctgctcaccatcggcttcctg
ttccgcaaggtgggccggcagctcaggtatttgtcagagttgtgctgtgtagatggggca
tctggtgtcggccaggctaccttccctgtgggtgtgacgctgctctcctacctgtacaac
gaggcccagagcaactgcagcaatgagaactaccccgtgctgctgtccctgctgaagagc
agctgtgagccttacacacggtttgtgtcagactgggtgtacagtggagtgttccgggac
gtgtacggagagttcatgatccaggtcaacgaagactacctcagcttcagagacaagcac
ttctgggtgcagggctacacgctgatctcccgtgatgtggaggactgcgtgcctgtcttc
ctccgacacatagccaacgacgtgtacgtctgcgggaagaccatcaacctgctcaagatc
tgctgtccccagcattacatctgctggtcggagctgcccatgcctcgcattgctgtcacc
ttctccctgcaggaggtagaggagatagagagggactgtgccgtgtaccgaggacgcatg
gagaggatcgccaagcacagcgctaccagcagggaggaacaggccctgcgcacagagcag
gcacgccaggaactgatcaatcaggtcaggcagtcggccgccaagaccctggagagcatc
cgcgggcgccaggtgtcacagcgtctggctgaagaggcaaagaagagggaacgctttgaa
gagctgagacagcacttggagcaggaacaagagtggcacagtttagccaggaggaaggag
caggaggatgaattcagctttgccagggagctgagagaccgggagaagcgactacaggcc
ctggaggagcagctggagatcagagccaggaaggaactgattgcccagtacagccaccta
tcagaggaggcagccaagagggagtggcaggccatgtggagggttcagcgaatgagactg
gacgattcccgggcccagttcctactgcaagaccaacaggagactgaggctattctggag
aagtatcctgtcggagggcagagaccccctctggaaatcctacagccagctccagctcag
accgctcaacccttagcacagcagtccctatccccggagccctgtgagcagcagtctgag
gagccaacccaggccccccttcaccaccaatccactcccctagcaccccccaccgcgaaa
ctcgacctcaccctcgtctcagagcacatcaacgccaatgacttcctgcccaagccggcc
gacagcctgcaggtggaccaggccctacaggaaattgggtcggacctcccggaggatcct
gcacctcataaacctgtagactatgactttagcgccccctacagtccccttgagggagtg
acggccccggccctggctagacctcgctggggtcctgtggtacagccagacatggctcac
cctcacatcccaaccggtccccctgagtccactctaggcatggggtgtgtggtatccggg
actttggctcttccgtctccgctacctggaagtacctacggccattcttcagactccact
atgggtgtagggtgtgtggtgtcaggagctgaggtcctccccaggcccagtcctcacggc
caggcctcccagtctagcatccccctgggccagtactcctctgatgtgcccctggctctc
cacacagccaatgtccacggacacccctcccagaccacagtgcagctggcggatgaaagt
caggcaaagcagatggacagcaggcaggagaatacggaagacccatcacctcctgggggc
atggtaaaagaggctgaagggactgtagaggcatcatgcctggtggagatgaagccagct
gagatggagaaactagatcatgttggagcagaggaacagatggctggttctctcagggag
gcttctgcctcctccaccccagagcagggccatgacagtgggtatcacccaggacaggcc
tccccttccctctctggaccctccagtgtgtccgagctccctactgccaacattcaaggc
catgcctcagatgctcatattaaagtcggagagcacgtttcagatgtggaagcccctctc
ccttctcaaaacgttcatggtcactcatctgatgctaacataaaggtaggagagtttgtt
tcggagatgactgctcctcttccgaccgccaatgttcacggtcacgcatctgacgctcat
attaaagttggagagcacgtttcagaagtggtcgcctcccttttcacccagaacattcac
ggtcatgcctcggactctcacatcaaggtcggggagcacatgtcagaagaggtcgcctcc
attcacacccaaaacattcacggtcactcatctgacactcacttcaaggcgggtgagttt
gtgttggacgcagagccctcccggccacgctggagcaagcatggtcacgcctcagactgc
acacttcaagtaggctgtgtgatgtcaggcacagaaccagtactctcccctctacccggt
agcacctacggccattcctctgagtccactctaggtatagggtgtgttgtctctggggtt
gaaccccttcatgctcctctacctggaagtgactttggacacgcctcagactcaaccctg
ggtggagggtgtgtggtgtcgggaacggtaacccttccttctccgatacccggaagtgac
tacggccattcgtcagattcagcgatgggcggagggtgcgtgatatctgggattgaaccc
gttcgcgctcctcttcccggcagcaacttcggacagtcctcagactccacactgggcaca
gggtgtgtggtgtcgggtgtaaaccctctgccctcccccatccctggcagtacctacggc
cacagctcagactctgccctgggagggggctgtaaggtgaaggagactggtaatgaatac
gacgccaggaccctggagcagcagcggctggccgagggcatctcgtcctgggcagcgggc
ttggctctgtccccaggcgagagctcagagagggagtacctcagctccctggctgctcag
taccaggtggagcagtacgaagactgctacggtctcatgacgttggccccggagtgtcac
cccctgcatcaggtgacgcggggcccctggggcctcccggtggacccgtcgctccgcagg
gccacagacaccacggtggtgcagcttagtgggatggtctccctgcccgtcctcatgaag
cactctgtcaccaccccactcatcacacatgtatccttggtgaacaaggcggtggtggac
tactacttcgtagagcttggagtagagaggcattttgaggccctcaggcacttcctgctc
atggaggacggggagtttgcccagtctctcagtgacctgatctttgaaaagatgggcagt
ggtcagactcctggagagctcttgactcctctggtcctgaactccatcctgagtaaggct
cttcagtacagtcttcatggagacagttctctggcccctaacttcaccttcgccctgcgc
ttcctcccggagaccttccaccctcacgcccccgacgcactcaactgcctggagctacgg
tacaaggtggactggccgttgaacatcataatcacagacagctgtatgaacaagtacaac
cgtctgttctccttcttgctgcagctcaaacacatggtgtggagcctcagagacgtctgg
tttcacctcaagaggactgcgctggtgaaaggggcgggccgctcggtgcagttccgccag
ctgcagctgtacagacatgagatgcaacactttgtgaaggtgatccagggatacatcgct
aaccagatcctgcaggtgtcctggttagagttcaccaccaagctggccagtgcctcggac
ctggacgccatacaccgcatacacgccgactacctcaacagagctatcttcaggggtctg
ctgacagagaaggcagctccagtcatgaacatcatccacagtatcttcagcctgatcctg
aagttccgggcccagctgatcgcacagccctgggacagccagcagggggaggcagtgcac
cccagcttcatcgccatgcagcagtcatacaacactttcaaatactactcccacttcctc
ttcaaagtggtgaccaagctggtgaaccgaggatatcagcctcacctggaggacttcctg
ctccgcatcaacttcaacaactactacaaagactcctga
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integrated database retrieval system
