Salmo trutta (river trout): 115197083 Help Entry 115197083         CDS       T08542                                  Name (RefSeq) protein CASC3-like isoform X1   KO K14323   protein CASC3 Organism stru  Salmo trutta (river trout) Pathway stru03013   Nucleocytoplasmic transport stru03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     115197083    03015 mRNA surveillance pathway     115197083  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:stru03019]     115197083 Messenger RNA biogenesis [BR:stru03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      115197083 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  115197083 NCBI-ProteinID:  XP_029614129 Ensembl:  ENSSTUG00000000847 LinkDB All DBs Position 1:45423551..45438792 Genome browser AA seq 782 aa AA seqDB search MADRRRRRRRASQDSEEDDESGSGSESGKSLSPTTKPRVRDPEPVEPPAVRVVPKNDAES ECESEDGVGEAVLSDYESADPEENGSHSEGGEEEEEVPPPAAGPKPTPASDTPAAEGELQ EGGGKDEEGEKGTRKEVKCEDKGNLAGERQSGDGQESTEDSENKGAKPGQKLDDDLDRNN PAYIPRKGMFFEHDVRGNAQEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKSREELVAI YGYDIRNGGVSNERSYRQRKPRHSTSPVRDKRWQDGDWERPVHTSWQQGGNPNSRSAPPA VALQQSGPPPSAAPNTQRNNNPPRPSSHPPPRGFQGNRPPQAQHRNDRNQESQRPGPKAH PAEPLQTRSLPPMDGERGPRGRGNRGAHTERSPSVVVEEVHSEEDDERNTTTVTTSQSVY YNRHYSGKGDRERDSAPPPRRQEQQRGGSAPPADNPVTRDASPAPERPVEKKSYSLARRT RTRATELGKQASLEEPASTVSSSALKSEPWQGPGQSQGDAGDSSQGTVLTGLDQDLARLS LAGQNWPQNPSSYLRAEMRGIPNSMHMGGAPPQYSNIEELGAGNRAKRYSSQRQRPSPEP APPMHIGVMEGHYYEPMSYQGPIYAHGDSPAPLPPQGMLVQPEMHLPHPGHPGHPGLHPH QSSGPMPNPAIYAAPPVSMSPGQPPPQQLLAPPFYPPPGVMTFGNTNYPYPAGATLPPMY NPPAQSQVYGQSQVYGGVTYYDPMQQQAQPKPSPPRRSSQPVTVKPPPPEDRSGKPSQEV RS NT seq 2349 nt NT seq  +upstreamnt  +downstreamnt atggcggatcggcgacgtcgaaggaggcgcgcatcccaggacagcgaggaggacgatgaa tctggttcgggatcagaaagtggaaagtccctttcgccaacgacaaagccccgagtacgg gaccctgaaccagtagagccaccagctgttcgtgtggtgccgaaaaacgatgctgaatct gagtgtgaaagtgaagatggtgtaggagaagctgtcctttctgactatgaaagcgcagat cctgaggagaatggctcccattcagagggaggtgaggaggaggaagaggtccctccaccg gctgctgggcccaaacccactcctgcttccgacacccctgctgcggagggggagctgcag gaaggagggggaaaggatgaggagggtgagaaaggtacgaggaaggaagtgaagtgtgaa gacaaaggcaacctggcaggggagcgtcaaagcggggatggacaggaaagcacagaagac tctgagaataaaggtgctaaaccaggccagaagctggatgatgacctggatcgtaataac ccagcctatatcccccgtaagggaatgttctttgaacatgacgtcagaggaaatgcacag gaggaggaacggcctaagggtcgtaacaggaagctgtggaaggatgagggtcgctgggaa cacgataggttcagggaggaggagcaggcgcccaagtcacgtgaggagctggttgcaatc tatggctatgacatccgcaacggaggtgtctccaatgagaggtcctatagacagcgcaag cccagacacagcacctctccagtccgggacaagcgctggcaggacggagactgggagagg cccgtccatacctcctggcagcaaggagggaaccccaacagccgtagcgcccccccagcc gtggccctgcagcagtctggtcctcccccctcagcagcccccaacacccagcgcaacaac aacccccccaggccctcctcccaccccccaccccggggcttccagggcaaccgccctccc caggcccagcacaggaatgacagaaaccaggagtcccaacggccaggccccaaggcccac cccgccgagcccctccagacccggagtttaccgcccatggacggggaacgaggccccagg ggccgggggaacagaggggcccatacggagcgcagcccttcggtagtggtggaagaggtc catagcgaggaggatgacgagcgcaacacaactactgtgacaacgtcacagtccgtgtac tacaatcgccactacagtggcaagggagatcgagaaagggactctgcgccaccgccacga cgacaggagcagcagcgagggggatctgctcctccggcagacaacccggttacccgcgat gcctccccggctccagagcgccccgtggagaagaagtcgtattccctagccaggagaact cgcacccgggccactgagctgggcaagcaggcctctcttgaggagcctgcctccaccgtg tcttcctcggccctgaagagtgagccgtggcagggccccggtcagagtcagggggatgct ggggacagcagccaggggacagtactcacagggttggaccaggacctggccagactcagc ctggccggacagaactggccccagaacccatcttcgtatctccgcgctgagatgaggggc atccctaactctatgcacatgggtggagcacctccacaatacagtaacatagaagagctg ggagctggtaaccgggcaaagcggtactcgtcccagcgccagaggccaagcccggagccc gctcctcctatgcacataggggtcatggagggccactactacgagcccatgtcttaccaa ggaccaatctatgcccacggcgacagccccgcccccctcccaccccagggcatgctggtc cagcctgagatgcacctcccccacccaggccatccaggacacccaggtctacacccccac cagtcgagcggccccatgcccaacccggcaatctacgctgctccccctgtctccatgtcc cctggacagccccctccacagcagctgttggccccgcccttctaccctccgccaggtgtc atgacctttgggaacaccaactacccctacccggcaggagccaccctgccccccatgtac aaccctccggcccagtcacaggtgtacggccagtcgcaggtgtacggtggggtgacgtac tacgacccgatgcagcagcaagcccagcccaaaccctcgcctccccggcgctcctcccag cccgtcaccgtcaaacctcccccaccagaggaccggagtgggaagcccagtcaggaggtc agatcctag

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