Salmo trutta (river trout): 115197114
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Entry
115197114 CDS
T08542
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115197114
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115197114
04091 Lectins [BR:
stru04091
]
115197114
Proteoglycans [BR:
stru00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
115197114
Glycosaminoglycan binding proteins [BR:
stru00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115197114
Lectins [BR:
stru04091
]
C-Type lectins
Lecticans
115197114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
Motif
Other DBs
NCBI-GeneID:
115197114
NCBI-ProteinID:
XP_029614162
Ensembl:
ENSSTUG00000020588
UniProt:
A0A673ZQH8
LinkDB
All DBs
Position
7:complement(20269059..20292253)
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AA seq
1298 aa
AA seq
DB search
MITLLLLCVSLPFVTSTISSEDPSDLDSTLSVSIPMDVPLRPLMGTKAVVPCYFHDNPID
HPGTPTVDPLSHRIKWTYITKGKATLILVASEGKVHVETEYLDRVTMANYPLVPTDITME
ITELRSKDSGTYRCEVMHGIEENYDSVDIQVQGIVFHYRAISTRYTLNFERAKAACIQNS
ATIATPAQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPREGCFGDKDEFPGVRTYGVREVN
ETYDVYCFAQKMSGRVFYSMSVEKFAFYQAMDQCAKLGAKLATTGQLYLAWKAGMDVCNA
GWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYQEDDGEVKTT
PFPEVATITAGPMVYLGHTTAPEAEAQGEVLTQAPLDTTSMELPLPILPSVNDMYAKVTP
VVGEEIISRVTAKPNVASEFPRDNDTAMSPTGVVFHYRAGSSRYALSFVEAQLACQSVGA
VIASSQQLQAAYKAGLHHCDAGWLRDQTVRYPILSPRDKCSGNLEHLPGVRSYGLRPATE
RYDVYCYVDRLKGELFYTSDYDSFSYKEAVAHCQKLNTTLATTGQLYVAWRQGFDKCRPG
WLQDRSIRYPIHNPRPHCGGGKAGVHTIYAFPNQTGHPDQHSRYDAYCFRAEPTIIHTET
RLNVTVVVEEEIINMTIRMDQLTPVSPIVPPASVDVSGSGLAEHSTSGSGSGTPGSGDTS
GGASGEGSGSGFQVTFEGSGHILSGQGSSSGGLQEAVEGSTTVTYTSRVGSGNSGSGVGV
GEFSGGLPSGVLPHSGSGSGVSGDLSGSGDSVIIMVDGEMVDISKQQPTGQEFGQGGVDV
SGSSGVSGSGGFFSGDVTSTSGSGLPDISFEHSGLIDLTEKPSGKHEVSGYQPFASGFPS
GFPSGYPSGFHSGSGFPSSSDGSHSGHEVILLTEDGMMEVTTRRRPEQGRGYVEVSGDGS
SQHEGSTSASGLSLGESTVAEGLSVVLPPGSTMTYPEYITYLGNTGRGDDLDLVEEGQEQ
EGHEQKGQEQEGLEQEGLEGPTETINVTAPSAFFSSPTTATAVSMVTPVVVEEPAVVDAV
QGCAEGWVKFMGSCYMHFLERDTWPDAEQRCQELNSHLVSITSQQEQEFVNSNAQDYQWI
GLNDKDVQNEFRWTDGSPLEFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLP
FTCKSEPVVCHSPPEVDNARPMGSRRDRYPVNSIVLYQCDAGFTRRHPPASRCLPDGRWE
EPQVECIGPGATPSNRLHKRSIRRRSKATNSRSWRKLL
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccttgctcctactgtgtgtgtctctgcccttcgtcacctcaacaatatcatct
gaagaccctagcgatctcgacagtaccttgagtgtcagcatccccatggatgtgccactg
cgccctctgatgggcaccaaggcggtggtgccctgctacttccacgacaacccaatcgac
cacccgggcacgcccactgtcgaccccctgtcccaccgcatcaagtggacctacattacc
aagggcaaggccaccctcatcctggtggcgtcggagggcaaagttcacgtggagacggag
tacctagaccgggtcaccatggccaactacccgctggtgcccaccgacatcaccatggag
atcacggagctgcgctccaaggactcgggcacctatcgctgtgaggtcatgcatggcatc
gaggaaaactatgactcggtggacatccaggttcaaggtattgtgttccactaccgagcc
atctctactcgctacactctgaactttgagagggccaaggctgcctgtatccagaacagt
gccaccatcgccaccccagcccagctacaggctgcctttgatgatggcttccaccaatgt
gacgccggttggctatctgaccaaacagtcaggtaccccatccatgagcctcgtgagggt
tgctttggagacaaggatgagttcccgggcgtgcgaacctacggcgtgagagaggtcaac
gagacctatgacgtgtactgcttcgcacagaagatgtcaggcagagtgttctattccatg
tccgtggagaagtttgccttttaccaggcaatggaccagtgtgccaaactaggggccaag
ctggccaccacagggcagctgtacctggcctggaaggctggcatggatgtgtgcaacgcg
ggctggctggcagatagaagcgtccgctaccctatcaacattgccaggccgcagtgcggt
ggaggactacttggagtgaggaccgtgtacctgttccctaaccaaacaggctacccctat
ccagactcccgctacgacgctatctgctaccaagaagacgacggcgaagtcaagaccacc
ccattcccagaggtggccaccatcacagctggacccatggtttacctggggcataccacc
gcccctgaggctgaggcacaaggggaggttctgacccaagcccccctggacaccaccagc
atggaactgcccttacccatcctccccagtgtgaatgacatgtatgccaaggtcaccccg
gtcgtgggggaagagatcatcagcagggtgacagctaaacctaatgtggcctccgagttc
cctcgtgacaatgacactgccatgtctcctacaggtgtagtgttccactaccgtgctggc
tccagtcgctatgccctgtccttcgtggaggcccagctggcctgtcagagcgtgggtgcg
gtcatcgccagctctcagcagctccaggcagcctataaggcagggctccaccactgtgat
gcaggctggctcagggaccagaccgtcaggtaccccatcctgtctcccagagataagtgc
tcagggaacctggagcatctcccaggggtgaggtcctatggcctgagacccgctaccgag
cgatacgatgtctactgctatgtggaccgcctcaagggggagctgttctacaccagcgac
tatgacagcttctcctacaaggaggccgtggcccactgtcagaagctcaacaccacgcta
gccaccacagggcagctctatgtcgcttggagacagggctttgacaagtgccgtccaggc
tggctgcaggaccgcagcatccgctaccccatccacaaccccaggccccactgtggagga
ggcaaggctggggtacacaccatatatgccttccccaaccagacgggacaccctgaccag
cactccagatacgacgcatactgcttcagagctgaacctacgattattcacactgaaacc
agactcaacgttactgtagttgtcgaggaggaaattatcaacatgacaatcagaatggac
caattgactcctgtgagccccatcgtaccacctgcatctgtggatgtctccggttcaggc
ttagctgagcattctaccagtggtagtggcagtggaacccctggtagcggagatacatct
ggtggggccagtggcgagggctccgggtctggcttccaagtcacattcgagggcagtggg
cacatcttgtcaggacagggctctagctctggaggtctacaggaagcagtagaggggagc
accactgtcacttacacctctagagttgggtctgggaatagtggctccggggtgggggtg
ggagagttcagcggtgggctaccgtccggtgtccttccccactccggtagtggcagtggg
gtatctggggacctgagcggtagcggggactctgtcatcatcatggtggatggagagatg
gtggacatctccaagcagcagcccaccggacaggagtttggacaaggaggtgtggatgtc
agtggctccagtggagtgtccggatcgggtggcttcttcagcggggatgtgaccagcact
tctggctccggacttcccgacatatctttcgagcattcgggtctcattgacctgaccgag
aagccctcgggaaagcacgaggtctctggctaccagcccttcgcctctggttttccaagc
ggtttcccctctggttatccttccggttttcacagcggctctggattcccatccagtagt
gacggatcccactcaggccatgaggtcatcttgctgacagaagatgggatgatggaggtg
acaacacggcggcgtccggagcagggtcggggctacgtagaggtcagtggagacggcagt
agccagcatgaagggagcacctcagccagtgggctctccctgggggagtcaacggtcgca
gaagggctgtctgtggtgctgccccctgggtctaccatgacttacccagagtatatcacc
tatctgggaaacacgggaagaggggacgacctggacctggtggaggaaggccaggagcag
gaaggccatgagcagaaagggcaggagcaagaagggctggagcaagaagggctggaaggg
cccacggagacaatcaatgtcacggcaccttctgcattcttctctagcccaacaacagca
actgctgtctcaatggtgacccctgttgtggtggaggagcctgctgtagttgacgcagtg
cagggctgtgccgaaggctgggtgaagttcatggggagctgctacatgcactttctagag
agagacacctggcctgacgctgagcagcgctgccaagagctcaactcccacctggtcagc
atcacctcccaacaggagcaggagtttgtcaactctaatgctcaggactatcagtggatt
ggactcaatgacaaggatgtgcagaatgagttccgctggacagatgggagtccattggaa
tttgagaactggaggcccaaccagccggataactactttaactctggagaggactgtgtg
gtgatgatctggcatgagaacggccagtggaacgatgttccctgcaactaccacctgccc
ttcacctgcaagagtgaacctgtcgtgtgccactccccccctgaggtggacaacgccagg
ccgatgggcagcagaagagaccgctaccccgtcaactctatagtcctctaccagtgtgac
gcgggcttcacaaggcgccacccacctgcttcacgctgccttcccgacgggcggtgggag
gagccacaagtggagtgtataggacctggtgccacccccagcaaccgactacataagagg
tccatcaggagacggtctaaagcaaccaacagtcggtcatggcggaagcttctctaa
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