Salmo trutta (river trout): 115197134
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Entry
115197134 CDS
T08542
Name
(RefSeq) integrin alpha-11-like isoform X1
KO
K06587
integrin alpha 11
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115197134
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115197134
09142 Cell motility
04820 Cytoskeleton in muscle cells
115197134
04810 Regulation of actin cytoskeleton
115197134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115197134
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115197134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_2
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
115197134
NCBI-ProteinID:
XP_029614234
Ensembl:
ENSSTUG00000028229
LinkDB
All DBs
Position
7:complement(21845985..21947861)
Genome browser
AA seq
1189 aa
AA seq
DB search
MEYYCSLLLWTCALLPGLWHCFNFDTKKYKIIEGSKEAQFGYTVQQHEAGGRKWLLVGAP
FETSGQHQTGDIYKCPMDTSPNTNCTRLNLGKVSLNNVSERKDKMRLGMTLTSNPKDNSF
VTCGPLWSYECGSSYYSTGICSRVNESFKFSKTISPAFQRCETYMDIMIVLDGSNSIYPW
YEVQDFLINILQKFYIGPGQIQVGVVQYGSRVVHEFTLNDFRSVEEVVEAAKTIDQRGGE
ETRTALGINVARTEGFKRGGRKGAKKVMLVITDGESHDSPDLQKAMEDSEADNITMYAIA
VLGYYNRRGINPEAFLKEIKYIASDPDDKHFFNVTDESALKDIVDALGERIFSLEGVNPN
GTGFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKVVPPKSSYLEEFPEEL
KNHGAYLGYTVNSVVSAKGRQLYVAGAPRFNHTGKVIIFTLRNNGNLTILHSLKGQQIGS
YYGSELAPLDIDGDGVTDFLLVAAPMFFSKGWERGKVYIYRVTQQSHFLLEGTLEVSDQS
QNSRFGGAMAPIPDMNGDSYSEVVVGAPLEDDHQGAIYLFYGQLNGIQHKYRQRIGAAGF
SAGLQYFGRSVHGMMDVNEDGLVDLAVGALGAAVLIWSRSVVRIQAKITFEPEKINTFNK
DCRRGGKDVTCMSAIVCISLDARTQMQSHGVGVWYRVLIDERRHPPRASLDDNDRQQQSR
NLTLQHGEESCEHVHFYVQETADYGHPIVFVVKAGLQSPDQGPVLDHGWPTTFRNEIPFW
NGCEGDDSCVPDLILHSRTDLLDRRQFCRPRERAAWALCHHQGASVGLERVVEASRRRLV
VEARLENQGENAYGTTLNISHSHNLLFSSLIVKDHSDIQIECRAEDRERNDRTCNVSSPF
MRSLTQVSFRLEFELNHSVFLDHVRVFLQAASDGEEISPEDNINNIFHPLKYEADLLFTR
DSKPPRFEINSDHYRNKPGSSGPSFNLTYHIQNLGFFPVTDLQFAVDLFAVTKSGNHLVQ
ITNIDIDQTVSSNCVLPHHMTPSHVFPEDLSHVPQLNHSNSMTLPMQCRLNLPAYKEVRV
TVWGRLHLQALFAVKFKTLELVTAASIELSPSSPVFLHEERPTRHIILEMRKDEDYKIPI
WIIVGSTLGGLLLLALLILALWKLGFFNRQKQREEEEEQVANGKTPEER
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaatactactgcagcctgctgctgtggacctgtgccctcctgccaggcctttggcac
tgcttcaattttgacacaaagaagtacaagatcattgaaggctccaaagaggcccagttt
ggatacacagtgcagcagcatgaggcaggaggacggaagtggctactagttggagctccc
tttgaaaccagtggccaacaccagacaggcgatatatacaaatgcccgatggacaccagt
cccaacaccaactgcactagactcaacctaggaaaggtatccctgaacaatgtgtcagag
cgcaaggacaaaatgaggctgggcatgacactgacctccaaccctaaggataacagcttt
gtgacctgtggtcctctgtggtcgtacgaatgtgggagctcctactacagcacaggcatc
tgctccagggttaacgaaagcttcaagttctccaaaaccatctcgccggccttccagagg
tgcgagacctacatggatataatgattgttctggacgggtccaactccatctacccctgg
tacgaggtgcaggacttcctcatcaacattctgcagaagttctacattgggccaggtcag
atccaggttggagtggtgcagtatgggtcgagggtggtccatgagttcaccctgaatgac
tttcgctctgtggaggaggtggtagaagcagccaagaccatcgatcaacggggaggggag
gagacacgcacggccctgggcatcaatgtggcacggacagagggatttaaacggggaggt
cggaaaggggctaagaaagtgatgctcgtgatcacggatggtgaatcccacgacagccct
gacctgcagaaggccatggaggacagtgaggcggacaacatcaccatgtatgccatcgct
gtattgggctactacaatcggcgtgggataaacccagaggccttcttgaaagagatcaag
tatatcgccagcgatcctgatgacaaacacttcttcaacgtgactgatgagtcggcgcta
aaggacatagtggacgccctgggagagaggattttcagtctagagggagtgaaccctaat
gggacggggttcggtctgcagatgtctcaggcaggcttctcatcacacatagtggaggat
ggcatattggtgggggccgtgggggcctatgattggaacggggctgttctgaaagagaca
cgtcatgggaaggtagtcccacccaagtcctcctatctggaagagttcccagaagaactg
aagaaccatggggcctacttgggttacacagtaaactcagtggtgtcggccaaaggcagg
cagctctatgttgctggagcccctcgcttcaaccacacaggcaaagtcatcatctttacc
ctgagaaacaatggcaacctcaccatcctacactcactcaagggccagcagattgggtca
tactacgggagtgagctagctcctctggacattgatggggacggtgtgacagacttcctc
ctggtggcagcgcccatgttcttcagtaagggctgggagaggggcaaggtctacatctac
agggtgactcagcagagccatttccttttggaagggacacttgaggtctccgaccagtcc
cagaactctcgttttggtggagcgatggcccctatccctgatatgaatggtgactcgtac
agtgaggtagtggtgggagctcctctagaggacgaccaccagggggccatctacctgttc
tacggccagctcaatggcatacaacacaaatacagacagagaattggagcagcaggcttc
tctgctggtctgcagtattttgggcgcagtgttcatgggatgatggatgtcaatgaagat
gggttggtggacttggcagtgggcgcgttgggtgcagcagtactgatctggtctcgcagt
gtggtgcgcatccaagccaaaatcacttttgaaccggaaaagatcaacaccttcaacaag
gactgccgcaggggaggcaaggacgtcacctgcatgtctgccattgtgtgtatcagtctg
gatgccaggactcagatgcagagccatggagtgggtgtgtggtacagggtgctgatagac
gagaggaggcaccctcccagagcatcgctggacgacaatgacagacagcagcagtcaagg
aatctgacactacaacacggggaggagtcctgtgaacatgtccacttctatgttcaggaa
actgcagactacggccatcccatagtgtttgtggtgaaggcaggtctgcagagtccagac
caaggcccggtgctggaccacggctggcccactacctttaggaatgagatccccttctgg
aatggctgcgagggggatgacagctgtgtccctgacctcatcctgcacagtcgaacagac
cttctagaccgcaggcagttctgtaggccaagggagcgggctgcatgggcgctgtgtcac
caccagggggcctcggtgggcttggagcgagtggtggaggcatcacgcaggaggctggtg
gtagaagctcgtctggagaaccaaggagagaacgcctatggcaccacgctcaacatctcc
cactcccacaacctgctcttctccagtctcatagtcaaggaccactcagacatccagatt
gaatgtcgtgctgaggacagggagaggaacgataggacctgcaatgtcagctcacccttt
atgaggtcactgacccaggtgtctttccggctggagtttgagttgaatcactctgtcttc
ctggaccatgtgagggttttcctgcaggctgccagcgatggggaggagattagcccagag
gacaacatcaacaacatatttcatcctctgaagtacgaggcagacctcctgttcacaagg
gactccaagcctcctcgttttgagatcaactcagaccactaccggaacaaacccggcagc
agtggtccatcgtttaaccttacttatcacatccagaatctgggcttcttcccagtgaca
gacttgcagttcgctgttgacttgtttgctgttacaaagagtggtaaccatctcgtccag
attaccaatatcgacattgaccagacggttagctctaactgtgtcctcccacatcacatg
actccaagccatgtttttcctgaagatctctcacacgtcccacagctgaatcactccaac
agcatgacgttgccaatgcagtgcagactcaacctgcctgcgtacaaggaggtcagagta
acagtctgggggcggctgcacctccaagctctctttgctgtgaagtttaaaactctggag
ttggtgacagcagcctccatagaactgagtccgtccagtcccgtgttcctgcatgaggag
aggccaacacgacacataatcctggagatgagaaaggatgaagattacaaaattcccatc
tggattatagtagggagcacgctgggcggtctgctgctgctagccttgctcatcctggct
ctatggaagctgggcttcttcaacaggcagaaacagagggaggaagaggaggagcaagta
gccaacgggaagacgccagaggagcggtaa
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integrated database retrieval system
