Salmo trutta (river trout): 115197148
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Entry
115197148 CDS
T08542
Name
(RefSeq) Bardet-Biedl syndrome 4 protein-like isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115197148
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115197148
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
115197148
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
BBSome
115197148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
ANAPC3
TPR_12
TPR_14
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_Slam
ARM_TT21_2nd
TPR_7
TPR_15
ARM_TT21_N
TPR_10
NatA_aux_su
Wzy_C_2
ARM_TT21_4th
TPR_20
ARM_TT21_C
PknG_TPR
ARM_TT21_5th
TPR_MalT
Iml2-TPR_39
DUF2989
Clathrin
Motif
Other DBs
NCBI-GeneID:
115197148
NCBI-ProteinID:
XP_029614264
Ensembl:
ENSSTUG00000031977
LinkDB
All DBs
Position
7:complement(22439861..22458107)
Genome browser
AA seq
527 aa
AA seq
DB search
MADDNPVADVQLPPASEIRKPRPKKASELPILERRNWLIHLHYIRKDYETCKSIIKEQLQ
ETGGMCEYAVYVQALILRLEGKIQQSLDLFQSCAILNPGSSDNLKQVARSLFLLGKHKAA
IEVYNEASQLNEKDWEISHNLGVCYIYTKDFNSAEEQLNIALELSKHDLTYMMLGKIHLL
EGDTDKAIDVYRSAVEFSPENTDLLTTLGLLYMQQGKYQKAFEHLGNALTYDPNNFKAIL
AAGSMMQTHGDYDVAMNKYRVAAYAVPESSPLWNNIGMCCFGNKKYVAAISCLKRANYLS
PFDWKILYNLGLVHLTMQQYASAFHFLSAAVNLQPKMSELYMLLAVALTNMDDGENAKRS
YEQAVLLDDCNPLINLNFAVLLYNQGDKKGATEQYLVMESKVMESSHNEEFDPELIEMAQ
KLASALQVGETSVWTKPGKDSKVSQHSKTTSLQPLGTNQALGQAMSSAASKSIQLAAGSK
APPKSTSTPLDEEHDVENAPSPPLGDPESEDHKAKEKKKSKPKPVAE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacaatcccgtagcggatgttcaactgcctccagcttctgaaatcaggaag
cctcgtcctaaaaaagcgtctgagctccctattttggagagaagaaactggctcatccat
cttcactacatccgtaaggactatgagacctgtaagtcaatcatcaaagagcagctacaa
gaaaccggggggatgtgtgaatatgctgtgtatgtacaagctttaatccttcgcctggaa
gggaaaatccagcagtcactggacctgttccagagctgtgcaatactcaaccctggcagc
tcagataacctcaaacaagtggccagatccctatttctccttggtaagcataaggctgcc
atagaggtttacaatgaggcttcacagctcaatgagaaagactgggagatcagccacaat
ttaggtgtgtgctacatctataccaaagacttcaacagtgcagaagagcagttgaacatc
gccctggagttgagcaagcacgacctgacctacatgatgctgggaaagattcacctgctg
gaaggggacactgacaaagccatcgacgtgtacaggagtgctgttgagttttctcctgaa
aacacggatcttctcaccactcttggcctgctatacatgcagcaaggcaaatatcagaaa
gcctttgaacaccttgggaatgctctgacgtatgaccccaacaactttaaggccatcctg
gcagctggcagcatgatgcagacgcacggggactatgatgttgccatgaataagtaccgc
gtggcagcttatgctgtacctgagagctcacccctttggaataacattggcatgtgctgc
ttcggaaacaagaaatatgtggcggccatcagctgtctgaagagggccaattacctgtct
ccgtttgactggaaaatcctgtacaacctgggcctggtgcatctcaccatgcagcagtac
gcctcagccttccacttcctcagtgctgccgtcaacctgcagccaaagatgtcagagctc
tatatgctgctggcagttgcacttactaatatggatgacggggagaatgccaagcgatca
tacgagcaagcagtgttgttggatgactgtaaccccttgatcaatctgaattttgctgtc
ctgttgtacaatcaaggagacaaaaaaggagccacagagcagtacctggtaatggagagt
aaagtgatggaaagcagccataatgaagaatttgacccagagctcattgagatggcccaa
aagttggcatctgctctccaggtgggagagacctcggtgtggaccaagccaggtaaggac
tccaaagtcagtcagcactccaagaccacgtccctgcagcccctgggcaccaaccaggcc
cttgggcaggccatgtcttcagctgccagcaaaagcatccagctagctgcaggctctaag
gctccacccaagtccacctccacgccgctagatgaagagcatgatgtggagaatgcccct
tcccctcccctaggggatcctgagtcagaggatcacaaagccaaagaaaagaagaagagc
aagcctaaacctgtggctgagtag
DBGET
integrated database retrieval system
