Salmo trutta (river trout): 115197156
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Entry
115197156 CDS
T08542
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115197156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115197156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115197156
Membrane trafficking [BR:
stru04131
]
SNARE
Syntaxin (Qa)
Stx-PM
115197156
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115197156
Exosomal proteins of other body fluids (saliva and urine)
115197156
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
Spectrin_Anc-1
VBS_C3G9
Lzipper-MIP1
Lge1
YtxH
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
115197156
NCBI-ProteinID:
XP_029614290
Ensembl:
ENSSTUG00000001090
UniProt:
A0A673W1Q2
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All DBs
Position
1:45825023..45882737
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AA seq
288 aa
AA seq
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MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgaccgggatcatttcatggatgagttctttgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgaacagagcattgaa
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgatatc
aagatggactctcagatagacaagcaggccctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtagacatggccatg
ctggttgagagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactattctgggagttgtcttggcgtcc
actatcggcggatacctgggcttttaa
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