Salmo trutta (river trout): 115197218
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Entry
115197218 CDS
T08542
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115197218
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115197218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
115197218
NCBI-ProteinID:
XP_029614404
Ensembl:
ENSSTUG00000008020
UniProt:
A0A673X8R9
LinkDB
All DBs
Position
7:30417021..30419299
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AA seq
311 aa
AA seq
DB search
MVNMYNIMEHQLKSSGPSHHLGTGMPPANAGGGHGGGHTGSKQPAIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKLMPKNNTLAAQYQMSAGNHLLSASTAQGQGGNPRIDSYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSVAQAQAYMNGANAYSPMSYSSSPQQVSPVMSMVKQQ
SDGHSMSPSPTGTHNHHQAQRGLQVQGDHLRDMISMYMPGGDASDAQRGYSVSAANIQQH
YLGGSAPLTHL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatggagcaccaactcaagtcctctggtccctcgcaccat
cttggaacagggatgccacctgcgaatgcaggaggggggcacgggggcggccacacagga
tccaaacaacctgcaatccaacctgacccgatggacaaagtcaagcggcccatgaatgct
ttcatggtatggtctcgcggtgagcgacggaaaatggctcaggagaatcccaaaatgcac
aattctgagatatccaaacgactgggtgtcgcgtggaaatctctgacagacgcagagaaa
aggcccttcattgacgaggccaagcgcctccgcgcggtgcacatgaaggattatccagac
tataaatacaaaccccgtcgtaaaaccaaactaatgccgaagaataatactctagccgcg
cagtatcagatgtcggctggtaaccacctgctgagtgcgtccacggctcagggacaaggt
ggaaaccccagaatcgacagttatggctggggccacaccgggggctacacggcggcgatg
cagagcgaggccctcggctacagccagcaacttcaccgctatgacctgtcagcacttcag
tatcagtccagcgtagcccaggcgcaggcctacatgaacggtgccaacgcatacagcccc
atgtcctacagcagcagcccccagcaagtcagcccagtgatgtctatggtgaagcagcag
tctgatggtcacagcatgtctccctcccctacggggacccacaaccaccaccaggcccag
cgtggtctccaggtccagggggaccatctcagagacatgatcagcatgtacatgcctggg
ggagatgcctcagatgcccagagggggtactctgtctccgcagctaacatccagcagcat
tacctgggagggtcagctccactcacccacctttga
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