Salmo trutta (river trout): 115197232
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Entry
115197232 CDS
T08542
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115197232 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115197232 (taf6)
03036 Chromosome and associated proteins [BR:
stru03036
]
115197232 (taf6)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115197232 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
115197232 (taf6)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115197232 (taf6)
STAGA complex
115197232 (taf6)
TFTC complex
115197232 (taf6)
SAGA complex
115197232 (taf6)
SLIK complex
115197232 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
115197232
NCBI-ProteinID:
XP_029614432
Ensembl:
ENSSTUG00000008766
LinkDB
All DBs
Position
7:31336653..31347788
Genome browser
AA seq
639 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGSIQK
GQGATSAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTIEGARIKAVSEGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNMEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRSPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASSTQ
QVITLSSSSGSSVTSTVASATSTLQPLVKLESRGAGGLGGSRPLQKYIVVSLPTSASSSL
ESKSGMLPPSSSSTSPISLEAGMKMDRSDSPGASTQSPH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcggaggccgaagcagtgcactgtggttttgcccactgagtccatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgctgccctgagc
gaggaggtcagctacagaataaaggaaatcgcccaggacgcgttgaagtttatgcaccac
ggaaagagacgtaaactgacaaccagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatgggttccagtcgcaggagttcatcccgttccgctttgccagcggagga
gggagagagcttcacttctacgaggagaaggaggtggaccttagtgacatcatcaacaca
cccctccctagagtcccacttgacgtttcactcaaagctcattggttaagtattgaaggt
gtccagcctgctataccagaaaacccacccccagcccccaaagagcagcagaaggctgag
tctacagagcccctcaaggtggtcaagcctggtcaggaggaggagggctccatccagaag
ggccagggagctacatctgcagaggctaaaggtaagaaggagggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacagag
gcctgcgttgggtcctgtgaggccaagagagctgaggctctacagagtattgctacagac
cctgggctctaccagatgctccccaggttcagcacttttatctctgagggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccaccctctacctagagaaatatctgcatgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgagaagacccag
tggacgacacggtatggctgcatcgctggactgtctgaactaggacctgatgtgatcaag
acgttgatcctgcccaggctcactatagaaggagctcgtatcaaagctgtgtctgaggga
cccgtggtctccaacatcgataagataggagcagaccacgtccaaagccttttactgaaa
cactgtgccagcgttattgccaagactcgtcccctgcctgacaacatggagcagtaccgg
gcagactacggttacctggggcccatgctctgttcccacgtggttaaggcccgggcccag
gcagcactacaggcccagcaagtcaacagaactacactcaccatcacacagcctcggccc
accctaacggtgtctcagagcgggataggagggtcgggggggtcccgttcccccagcatc
atcaaggttcccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgccccctgcaaccaagtacatcgtcatggcaaccagtgcaggggcatcttccacccag
caggtgatcaccctgagttcctcctcgggatcctcggtgaccagcacggttgccagcgct
acctccaccctgcagcctctggtcaagctggagtccagaggggctggcggcctggggggg
tcgcgacccctccagaagtacattgtggtgtctctccctacgtccgcctcttcctccctg
gagagtaagagtggcatgctccctccctcctcttcctccacctctcccatctcgctggag
gccgggatgaagatggatcgctcagactctcccggggccagcacacagtccccgcactaa
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