Salmo trutta (river trout): 115197251
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Entry
115197251 CDS
T08542
Name
(RefSeq) cadherin-related family member 5-like
KO
K16505
cadherin-related family member 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115197251
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Cadherin related
115197251
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
115197251
NCBI-ProteinID:
XP_029614477
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Position
7:32086783..32125554
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AA seq
722 aa
AA seq
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MQQRSSCLWRWRVLLWSTLLLLSPLRATGHLFTIVEDGVSLEDGSGDPGLDQTVRGENWN
PCLEGHDVFSTVKENSMIGELIVELNTELTANDVVWSLTGEDADWFFLERRSIRLNAPLD
RVLDREVQGPVLMAALTCYEEDTVQSEYRIMVEILNENDNTPEFVESTIQPRSISELAEV
KTVVFTVQATDADGDTIMYSIDQTSPDAAYFRVDLPNSGEVILAKPLDYETKTQLKITIY
ASEMNTVEKFNTSAILTVNILDGDDQYPQFLPCTPPSNDQSHRVCTNPVYTVNITEGEQD
VLLDFSPGPINAVDGDRGLSSPLSYSILSGADNGRFVMDELTGEVRLMKEVENRLLTPTL
RLRVMAYQRNDPRKYSVATVVVRVVAVNRFPPQFGRAEYRGFVTEGNSPASLVNTYGNTV
LLLQIQDRDFSDGINPKIHYSLRSSSNHTEFYHITQEGLLIARTNQLRPSQKHSLKVVAV
DLESGDMATALIKVEVLYEGQIVPQGPLGDGRLHGSCAVGKAMGVVILGLTLLGCALYAL
QHVLRTYKGLKDPEDRGCIAQGKHPNVRLQWFQLVSHSSPMPVLDEVKFKKEGLSTSTST
SKLLGGQSIYTPADSDPSPFNALPIATPSTTYIQPILASSTHTDPNHGPASHNSTHTPAT
TITPELLKTSTQLLGNSSSSTPPTPIIYTCHGSDRLTFSYTPLPCCRCNRYTHSGRRDTY
LT
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcggagttcttgtctgtggaggtggagggtcctactctggtccacactactc
ctcctcagtcccctcagagccacagggcatctctttaccattgtagaagatggcgtgtct
ttggaggacgggagtggtgaccctggtttagaccaaactgtgagaggagaaaattggaac
ccatgtctggagggccatgatgtgttttccacggtcaaagagaacagcatgataggagaa
ctcatcgttgagctcaacactgagctgacagccaatgatgttgtctggagcctaactggg
gaggacgctgattggttcttcctagaaaggcggagcatcagactcaatgccccattggat
agagttctggaccgggaggtgcagggcccagtcctgatggcagcgttgacctgctatgag
gaggacaccgtgcagagtgagtacaggatcatggtggagattctgaatgagaatgataac
actcctgagtttgtggagagcaccatacagcctcgcagcatcagtgagctggctgaggtg
aagacagtggtgtttacagtccaggccacagatgcagatggcgacaccataatgtactcc
atcgaccagacctcgcctgatgctgcttacttcagagtggatctccctaacagtggagag
gtgatactggccaagcctctggactacgagaccaaaacacaactgaagatcaccatatat
gcttcggagatgaatactgtggagaagttcaacaccagtgccatcctgaccgtgaatatc
ctggacggagatgaccagtacccacaattcctgccgtgcacgcccccctctaacgaccaa
tcgcatcgtgtctgcaccaaccccgtctacacggttaacatcacagaaggcgaacaggac
gttcttctggacttctctcctgggccgatcaatgctgtggatggagacagaggcctcagc
tcacctctcagctatagcatcctgtcaggggctgataatggccgttttgtgatggatgag
ctgacaggggaggtgcgtctgatgaaagaagtagagaacagactactgacacccacacta
cgcctacgggtcatggcgtaccagaggaatgaccctaggaagtactcagttgccacagtg
gtggtccgtgttgtggctgtcaaccgctttcctccccagtttggtcgggccgaataccgt
ggttttgtcactgaaggcaacagccctgcctcactggtcaacacttacggaaacaccgtg
ctgctgctacagatacaggacagggacttctctgatgggattaatcccaagatacactac
tccctgaggtcctcgtccaatcacacagagttttaccacatcacacaggaggggcttctg
atcgccaggaccaatcagctacgaccatcacagaaacacagtctgaaggtagtggctgtg
gatctggagtcaggtgacatggccacggctctcataaaggtggaggtgctgtatgaagga
caaatagtccctcagggcccattgggggacgggcgtctccatggtagctgtgcagtaggc
aaggctatgggtgtggtcatcctggggctgactctgttaggctgcgctctgtatgcactg
cagcatgtcctcaggacatacaaaggactgaaggacccagaggacaggggctgtatagca
cagggaaaacaccccaatgtgagattacaatggttccaactggtgagtcacagtagcccc
atgccagtccttgatgaggtgaagttcaaaaaggagggtctaagcacctccacctccacc
tccaagctcctgggcggtcagagcatctacacacctgcagactcagacccttctccattc
aacgctttacccatagctacaccctcaacaacctacatccagcctatactagccagctcc
actcatacagaccccaatcatggccctgcgtcacacaactccacccatacacctgctaca
accatcacacctgaactactcaagacatccactcaactcctgggcaactccagctctagt
accccccccacacccatcatctacacctgccatggatcagacagactcacctttagctac
acacccctcccctgttgcagatgcaataggtatacccactcaggtagaagagacacctac
ctcacctaa
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