KEGG   Salmo trutta (river trout): 115197304
Entry
115197304         CDS       T08542                                 
Name
(RefSeq) interferon regulatory factor 3-like
  KO
K09447  interferon regulatory factor 7
Organism
stru  Salmo trutta (river trout)
Pathway
stru04620  Toll-like receptor signaling pathway
stru04621  NOD-like receptor signaling pathway
stru04622  RIG-I-like receptor signaling pathway
stru04623  Cytosolic DNA-sensing pathway
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    115197304
   04621 NOD-like receptor signaling pathway
    115197304
   04622 RIG-I-like receptor signaling pathway
    115197304
   04623 Cytosolic DNA-sensing pathway
    115197304
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115197304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115197304
Transcription factors [BR:stru03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    115197304
SSDB
Motif
Pfam: IRF-3 IRF OYE-like_second_a-b
Other DBs
NCBI-GeneID: 115197304
NCBI-ProteinID: XP_029614556
Ensembl: ENSSTUG00000003347
LinkDB
Position
7:complement(34552609..34557474)
AA seq 455 aa
MTEVRGSALTMQSRNPKPQFADWLIEQVWTGQYAGLYFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTDYTPPGMEHDNLLKLVNTLDLNQPTEEWAEN
YIHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPIPVPVQQPYDHVNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGPLVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNRI
LGSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
DLIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEVAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgacagaagtacgtggctcagcattaacgatgcaaagtcgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtattttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaaacgtttcatg
atggtggaagaccactccaaggactcagacgacccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacagactacacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccttagacctgaaccaacctactgaggagtgggcagagaac
tatatacacacacaccacccagtagtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaaccactcaccaccaccaatcccagtaccagtacagcag
ccatacgaccacgtgaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccccctggttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctc
tgcttccctagcactgacggcctgctagaccacaaacagattgaatacaccaaccgcatc
ctagggagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctccagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgact
gatctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggagagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgaggtggcccagggggagggggcgtcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgacggcccagagcacaccatggggcaatacttctag

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