Salmo trutta (river trout): 115197304
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Entry
115197304 CDS
T08542
Name
(RefSeq) interferon regulatory factor 3-like
KO
K09447
interferon regulatory factor 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115197304
04621 NOD-like receptor signaling pathway
115197304
04622 RIG-I-like receptor signaling pathway
115197304
04623 Cytosolic DNA-sensing pathway
115197304
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115197304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115197304
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115197304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
OYE-like_second_a-b
Motif
Other DBs
NCBI-GeneID:
115197304
NCBI-ProteinID:
XP_029614556
Ensembl:
ENSSTUG00000003347
LinkDB
All DBs
Position
7:complement(34552609..34557474)
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AA seq
455 aa
AA seq
DB search
MTEVRGSALTMQSRNPKPQFADWLIEQVWTGQYAGLYFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTDYTPPGMEHDNLLKLVNTLDLNQPTEEWAEN
YIHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPIPVPVQQPYDHVNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGPLVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNRI
LGSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
DLIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEVAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagtacgtggctcagcattaacgatgcaaagtcgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtattttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaaacgtttcatg
atggtggaagaccactccaaggactcagacgacccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacagactacacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccttagacctgaaccaacctactgaggagtgggcagagaac
tatatacacacacaccacccagtagtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaaccactcaccaccaccaatcccagtaccagtacagcag
ccatacgaccacgtgaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccccctggttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctc
tgcttccctagcactgacggcctgctagaccacaaacagattgaatacaccaaccgcatc
ctagggagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctccagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgact
gatctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggagagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgaggtggcccagggggagggggcgtcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgacggcccagagcacaccatggggcaatacttctag
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