KEGG   Salmo trutta (river trout): 115197339
Entry
115197339         CDS       T08542                                 
Name
(RefSeq) protein NEDD1-like isoform X1
  KO
K16547  protein NEDD1
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115197339
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:stru04812]
    115197339
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     115197339
   Microtubules and associated factors
    gamma-tubulin ring complex
     115197339
Cytoskeleton proteins [BR:stru04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     115197339
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40 WD40_WDHD1_1st WDR55 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_Gbeta EIF3I Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_RFWD3 CFAP251_N Beta-prop_IFT140_1st DSE1_N Beta-prop_Aladin Beta-prop_WDR75_1st PAC11 Beta-prop_NUP159_NUP214 NBCH_WD40 WDR90_beta-prop_4th PEP5_VPS11_N eIF2A Beta-prop_Vps41 WD40_like Beta-prop_SPT8 ASA1 Beta-prop_ACSF4 TRM82_WD Frtz KNTC1_N PROPPIN Cytochrom_D1 SdiA-regulated Ge1_WD40
Other DBs
NCBI-GeneID: 115197339
NCBI-ProteinID: XP_029614612
Ensembl: ENSSTUG00000001361
LinkDB
Position
7:37491153..37510584
AA seq 697 aa
MEEVTRLVSSGDCVKIWDSASMTVLEQFNPHSATHPVAQVCWSSNNQYLVSASSIGDKLV
VSSLKSSPIPVVELAEGKKQTRVSLNSTSQYLVSGGLDNSVNIWDLKAKRLHRTLKDHNE
EVTCVSFNGSDSYIASGSTSGDIILHSITTNLSSKAFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGSVVLWDANTQKELHVFDGAHKAPASGLAFSPANDLLFVTVGLDKKIICYDTSSKI
VLRSMRVESPLTAIDFTPDGAGLVVGSTQGRLYLYDLRNLSAPTKTATAHKTSITSLRFQ
SSQSRHLKSSKMASSKSSSAHTSKRISARLGNTYLPAATHSSTSTPPSSLLAPHTVDGGD
AQGTGSSVEVVSREAEGQPGSDRLPSLDKFSSVGRNSLDIFSPVRDDYKAHGMGGDAPGG
IKGNGTSLDMFSREGEGQNSTEKFCKVGRNSLDIFSPVREDYKSHGMTADVTSGKKGNNL
DFLPSNSGGPPHRKTPLGTPGGGRCYSPLSVFQTPQPIKEEAEPPAQTDTRDLKRYEKGG
GSSLEGEGPTPHSQPAQLFFTPEPSLRRANDMQAQLRYNTPINGGPPTTAPAGPAVSSVV
ASSVSERIVDAVGAEGGGAPLTSLQIQFIRNMIHETLEDFRDACHRDIVNLQVEMVKQFY
IQLNEIHGLIEKYSVNDTLVEEIEKLREENKRLRANY
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggaggaggtgacgcgcctggtatcctcaggcgactgtgtgaagatctgggactcagcc
tccatgacagtgttggaacagttcaacccacacagcgctacacaccctgtggcccaagtg
tgctggagcagcaacaatcagtatcttgtaagcgccagcagtataggagacaagctggtg
gtatccagtctcaagtcctctcctatcccagtggtggaacttgcagaggggaaaaagcag
acccgcgtgagtctgaactcgacgtcccagtacttagtgagcggggggcttgataactcc
gtcaacatctgggatctgaaggccaagaggcttcatcgcaccctcaaggaccacaatgaa
gaggtgacgtgtgtgtcctttaatggcagtgacagctacatcgcatcgggctccaccagt
ggtgacatcatcctgcacagcatcaccaccaacctgtctagtaaggcctttggacacggc
accaaccagcccatccacgacctgaagtactctgtggtgaagcgctccctgctgggcagt
gtgtcagatagtggctctgtggtcctgtgggacgccaacactcagaaagagctgcacgta
tttgatggagcccacaaggcccccgcctcgggcctggccttctccccagccaacgacctg
ctctttgtcaccgtgggcctggacaagaagatcatctgctacgacacctccagcaagatt
gttctccgcagcatgcgtgtggagtccccattgaccgccattgacttcactccagacggg
gcaggcctggtggtgggctccacccagggcagactgtacctgtacgacctgcgcaacctc
agcgctcccaccaagactgccaccgcacacaagacctccatcaccagcctgcgcttccag
agctcccagagcagacacctcaagtccagtaaaatggcatccagcaagtcttccagcgct
cacacaagcaagaggatctcagccaggctgggtaatacctacttaccagcagccacccac
agctccacctctacacccccctctagcctgcttgcaccccacacggtagatggaggggat
gcacagggcacaggctccagtgtggaagtggtctccagagaggcggagggccagccgggt
tctgaccgcctgcccagtctggacaagttcagtagcgtgggtagaaacagcctggacatc
ttctcccccgtaagagacgattacaaagcccatgggatgggtggtgatgctcctggtgga
atcaaaggtaatgggaccagtttggatatgttctccagagaaggagaagggcaaaacagc
acggagaagttctgcaaagtgggacgcaacagtctggacattttctctccagtcagagag
gattacaaatcccatggaatgaccgcagatgtaacaagtgggaagaaaggaaacaatctg
gacttcctcccttccaactctggtggacccccacaccgcaagactcccctgggcacacct
ggaggcgggcgctgttacagccccctgtctgtcttccagacccctcaaccaatcaaagag
gaggccgagcctccagcgcagacagacacacgggatttgaaaaggtatgagaagggtggt
ggttccagtctggagggtgaaggccccaccccacacagccaaccagcacagctgttcttc
acccctgaacccagcctgaggagggccaatgacatgcaggcccaactgcgctacaacaca
cccatcaatggtggtcctcccactactgcaccagcaggccctgcagtttcttcagtggta
gcatcctctgtatcagagagaatagtggatgctgttggcgcagagggtggaggcgctccc
ctcacatccctgcagatccagttcatccgcaacatgatccacgagaccctggaagacttc
agggacgcctgccaccgagacatagtgaacctccaggtggagatggtcaaacagttctac
attcagctgaacgagatccatggtctgatcgagaagtactcagtcaacgacacgctggtg
gaggagatcgagaagctgagggaggagaacaaacgactccgagccaattactga

DBGET integrated database retrieval system