Salmo trutta (river trout): 115197339
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Entry
115197339 CDS
T08542
Name
(RefSeq) protein NEDD1-like isoform X1
KO
K16547
protein NEDD1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115197339
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115197339
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
115197339
Microtubules and associated factors
gamma-tubulin ring complex
115197339
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
115197339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_Vps41
eIF2A
WD40_like
Beta-prop_SPT8
Beta-prop_LRRK2
Frtz
KNTC1_N
PROPPIN
Cytochrom_D1
VPS8_N
SdiA-regulated
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
115197339
NCBI-ProteinID:
XP_029614612
Ensembl:
ENSSTUG00000001361
LinkDB
All DBs
Position
7:37491153..37510584
Genome browser
AA seq
697 aa
AA seq
DB search
MEEVTRLVSSGDCVKIWDSASMTVLEQFNPHSATHPVAQVCWSSNNQYLVSASSIGDKLV
VSSLKSSPIPVVELAEGKKQTRVSLNSTSQYLVSGGLDNSVNIWDLKAKRLHRTLKDHNE
EVTCVSFNGSDSYIASGSTSGDIILHSITTNLSSKAFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGSVVLWDANTQKELHVFDGAHKAPASGLAFSPANDLLFVTVGLDKKIICYDTSSKI
VLRSMRVESPLTAIDFTPDGAGLVVGSTQGRLYLYDLRNLSAPTKTATAHKTSITSLRFQ
SSQSRHLKSSKMASSKSSSAHTSKRISARLGNTYLPAATHSSTSTPPSSLLAPHTVDGGD
AQGTGSSVEVVSREAEGQPGSDRLPSLDKFSSVGRNSLDIFSPVRDDYKAHGMGGDAPGG
IKGNGTSLDMFSREGEGQNSTEKFCKVGRNSLDIFSPVREDYKSHGMTADVTSGKKGNNL
DFLPSNSGGPPHRKTPLGTPGGGRCYSPLSVFQTPQPIKEEAEPPAQTDTRDLKRYEKGG
GSSLEGEGPTPHSQPAQLFFTPEPSLRRANDMQAQLRYNTPINGGPPTTAPAGPAVSSVV
ASSVSERIVDAVGAEGGGAPLTSLQIQFIRNMIHETLEDFRDACHRDIVNLQVEMVKQFY
IQLNEIHGLIEKYSVNDTLVEEIEKLREENKRLRANY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacgcgcctggtatcctcaggcgactgtgtgaagatctgggactcagcc
tccatgacagtgttggaacagttcaacccacacagcgctacacaccctgtggcccaagtg
tgctggagcagcaacaatcagtatcttgtaagcgccagcagtataggagacaagctggtg
gtatccagtctcaagtcctctcctatcccagtggtggaacttgcagaggggaaaaagcag
acccgcgtgagtctgaactcgacgtcccagtacttagtgagcggggggcttgataactcc
gtcaacatctgggatctgaaggccaagaggcttcatcgcaccctcaaggaccacaatgaa
gaggtgacgtgtgtgtcctttaatggcagtgacagctacatcgcatcgggctccaccagt
ggtgacatcatcctgcacagcatcaccaccaacctgtctagtaaggcctttggacacggc
accaaccagcccatccacgacctgaagtactctgtggtgaagcgctccctgctgggcagt
gtgtcagatagtggctctgtggtcctgtgggacgccaacactcagaaagagctgcacgta
tttgatggagcccacaaggcccccgcctcgggcctggccttctccccagccaacgacctg
ctctttgtcaccgtgggcctggacaagaagatcatctgctacgacacctccagcaagatt
gttctccgcagcatgcgtgtggagtccccattgaccgccattgacttcactccagacggg
gcaggcctggtggtgggctccacccagggcagactgtacctgtacgacctgcgcaacctc
agcgctcccaccaagactgccaccgcacacaagacctccatcaccagcctgcgcttccag
agctcccagagcagacacctcaagtccagtaaaatggcatccagcaagtcttccagcgct
cacacaagcaagaggatctcagccaggctgggtaatacctacttaccagcagccacccac
agctccacctctacacccccctctagcctgcttgcaccccacacggtagatggaggggat
gcacagggcacaggctccagtgtggaagtggtctccagagaggcggagggccagccgggt
tctgaccgcctgcccagtctggacaagttcagtagcgtgggtagaaacagcctggacatc
ttctcccccgtaagagacgattacaaagcccatgggatgggtggtgatgctcctggtgga
atcaaaggtaatgggaccagtttggatatgttctccagagaaggagaagggcaaaacagc
acggagaagttctgcaaagtgggacgcaacagtctggacattttctctccagtcagagag
gattacaaatcccatggaatgaccgcagatgtaacaagtgggaagaaaggaaacaatctg
gacttcctcccttccaactctggtggacccccacaccgcaagactcccctgggcacacct
ggaggcgggcgctgttacagccccctgtctgtcttccagacccctcaaccaatcaaagag
gaggccgagcctccagcgcagacagacacacgggatttgaaaaggtatgagaagggtggt
ggttccagtctggagggtgaaggccccaccccacacagccaaccagcacagctgttcttc
acccctgaacccagcctgaggagggccaatgacatgcaggcccaactgcgctacaacaca
cccatcaatggtggtcctcccactactgcaccagcaggccctgcagtttcttcagtggta
gcatcctctgtatcagagagaatagtggatgctgttggcgcagagggtggaggcgctccc
ctcacatccctgcagatccagttcatccgcaacatgatccacgagaccctggaagacttc
agggacgcctgccaccgagacatagtgaacctccaggtggagatggtcaaacagttctac
attcagctgaacgagatccatggtctgatcgagaagtactcagtcaacgacacgctggtg
gaggagatcgagaagctgagggaggagaacaaacgactccgagccaattactga
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