Salmo trutta (river trout): 115197376
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Entry
115197376 CDS
T08542
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115197376
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115197376
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Filament
Motif
Other DBs
NCBI-GeneID:
115197376
NCBI-ProteinID:
XP_029614672
Ensembl:
ENSSTUG00000007629
LinkDB
All DBs
Position
7:39224067..39272190
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AA seq
1030 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFMGSLRALNLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDMCLDEHREKLNATEEMLQQELLCRTALETQKQDLMAEVS
NLKLNSSETDRLHFDFSDNEDMVLEMNELRYRVTEMESERLQYEKKLKSTKSLMAKLSSL
KIKVGQMQYEKQRKENKLQALKEELAMLRRHLEGRDRELRRLHDETGFRGITPVGMDSGD
RVSHPDETLKLRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLLHYKKVQDRSSM
QGEKERTQDGESDESNSDSSLSVMSTTTALVAMESERHALAGDEVAGKSPDELEMHYGVT
EVSSPTPSPSVQSACDPKRGPELDQPEPESEAGGQEESQQAPLSCDTPQTLDSPNSGSQD
NLYVSNSEKLFSATVQNKAVEEISKISERPPKSPSSSHPVTTEDDRFGNKKARSSFGRGF
FKIKGGKRTASTPNLDRSRSASAPMLAETEREEGTDHLDLAGLPQRSANSDSTNTLTSVT
STTSPECKKKSKGIKGLFGKLRRSQSTTFNLDDNLSEAVEFKRGGVRATAGPRLGWSRDL
QRLPKNDLDTPFARWSKEQVCDWLQEQGLGLYLNMARVWISSGQTLLQGSQQDLEKELGI
KHPLHRKKLQLALQALGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRMDGRMLHY
MTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRV
MEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNL
LVGSEAQGLKQDCLENPDYTLLTATAKVKPRKMSFGSFGSLRKKRQDDSEEYICPMDVEM
PKGRSFQKGYELQLYEDDIDRMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFREISNSPN
PSITDDDSNM
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagccttggagcagatggatgggataata
gcaggttccaaggctatggactactctaacgggctgtttgactgccagtcgcccacctct
cccttcatgggcagcctgcgggcgctgaacctgctggaggacctccggggcgtgctggag
ctgatggacacagaggagagggagggcctgcgctgccagatccctgacgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggtcaccacatctccatg
ggcggggacctctaccaggagagactgtctcggctggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcacagggggagaagataagggacttg
gacatgtgtttggatgagcaccgggagaaactgaacgccactgaggagatgctgcaacag
gagctcctgtgcagaacggctctggagactcagaaacaggacctgatggctgaggtgtcc
aacctgaagctgaactcatccgagacggacagactgcactttgacttcagcgacaatgag
gacatggttctggagatgaatgaactgaggtacagagtgactgagatggagagtgaaaga
ctacagtatgagaagaaactgaaatccactaagtcgttaatggccaagctttctagcctg
aaaatcaaagtgggccagatgcagtatgagaaacagaggaaggaaaacaaactgcaggcc
ctgaaggaggagctggcaatgctgaggaggcatctggagggaagggacagagagctgagg
aggttacacgacgagactgggttcagaggcatcacaccggttggaatggacagtggagac
agagtctctcacccagatgaaactcttaaattgaggctgaaagagaaacatgtggaagtg
cagagaatgaaaaaagcagtggaatcactgatggcagccaatgaggagaaggatcgtaag
attgaggagttgaggcagtcgctgctgcactacaagaaggtccaggacaggagctcaatg
caaggggagaaagagagaacccaagacggcgagagtgacgagagtaacagcgacagctcc
ctctccgtgatgtcaacgacaaccgccctggttgccatggagtcggagaggcacgctcta
gccggagacgaagttgcagggaaaagcccagacgagctggagatgcactatggagttact
gaagtgtcttcgcccacacccagcccttcagtccagtcagcatgcgatccaaaaaggggg
ccagagctggaccaacctgaaccagagagcgaggcagggggccaggaagagtcacagcag
gcccccctttcatgtgatactccacagaccctggatagccccaattcagggagtcaggac
aacttgtatgtcagcaacagcgaaaagctcttttctgctactgttcagaataaggctgtg
gaggagatcagtaagatcagcgagcgcccgcccaagtctccctcttcgtctcaccccgtg
accacggaggatgaccgcttcggtaacaagaaggctcgctcctccttcggccgtggcttc
ttcaagatcaagggaggcaagaggacagccagcacccctaacctggatcgcagccggagt
gcgagtgcgcctatgctagctgagactgagcgagaggagggcactgaccatctggacctg
gccggtctaccccaaaggtcagccaacagcgacagcaccaacacactgacaagtgtaacc
tccactacatcccccgagtgcaagaagaagtccaagggaatcaaggggctctttggaaag
ctgaggagaagtcagtccaccacgttcaacctggatgacaacctatcagaggcagtcgag
ttcaagagaggcggagtccgagccacagcaggtcccagactgggctggtcccgtgaccta
cagagattacccaagaatgacttggacaccccgtttgcccgctggtccaaggagcaggtg
tgtgactggctgcaggagcaggggctggggctctacctgaacatggcccgcgtgtggatc
tcttctggacagactctgctgcagggctcacagcaggacctagagaaggagctgggcatt
aaacacccgctgcacaggaagaagctccagctggccctgcaggccctgggctctgaggag
gatgacaacaagggcaaactggactacaactgggtgaccaggtggctggatgacattggc
ctgcctcagtataagacccagtttgatgaggggaggatggatggccgcatgctgcactac
atgacagtagatgacctgctatctctgaaggtgggcagtgtgctccaccacctcagcatc
aagagagccattcaggtgctgcgcctcaacaactacgagcccaactgcctgcgccgacgg
ccctccgacgagaacaacatcacgccggcagagatctcccagtggaccaatcacagagtg
atggagtggctgagatcagtggacctggcggagtacgcccccaacctgaggggcagcggc
gttcacgggggactcatggtgctggagccacggttcaatgtggagaccatggccctgctg
ctgaacattccccccaacaagaccttgctgcggaggcacctggccacccacttcaacctg
ctagtaggctctgaggcccaggggctcaaacaggattgtctggagaatcccgactacacc
ctgctcaccgccaccgccaaggtcaagccgaggaagatgtcgtttgggagcttcggcagc
ctgaggaagaagaggcaggatgacagtgaggagtatatctgccccatggacgtggagatg
ccaaagggacgtagcttccagaaaggctatgagcttcagctctacgaggacgacattgac
cggatggaggactcagagggaactgtgaggcagatcggagctttctccgagggcatccaa
aatttgacgagcatgctgaaagacgatgaatttttcagagagatctccaactcacccaac
cccagcataacagatgacgattccaacatgtga
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