Salmo trutta (river trout): 115197382
Help
Entry
115197382 CDS
T08542
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03020
RNA polymerase
stru04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115197382 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115197382 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115197382 (polr3b)
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115197382 (polr3b)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
115197382 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
115197382
NCBI-ProteinID:
XP_029614693
Ensembl:
ENSSTUG00000008246
LinkDB
All DBs
Position
7:complement(39392126..39431224)
Genome browser
AA seq
1132 aa
AA seq
DB search
MEILGEEFGDMTPQQLAAPVNTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTSMEYSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNALSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMANFSPSLEECQKAQIFTEIQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDIVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQRLVYTFRLMRRAGFINEFVSISTNLTDRCVYVSSDGGRLCRPYIIVKK
GQPMVKNKHIEELTQGYRTFEDFLHESLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPVSYKGSTDSYIEKVMISSNADDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVMDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccttggagaggagtttggagatatgactccccagcagcttgcggctcctgtc
aatactatagaggaaaaatggaaactattgccagcttttttgaaggtgaaaggtctggtg
aaacagcacattgactccttcaactacttcatcaatgtggagataaagaagataatgaaa
gcaaacgaaaagatcacaagtgatgctgatcccatgtggtacctaaagtacctcaatata
tacgttggcatgcctgatgttgaagagagcttcaatgtaaccagaccagtgtctccacac
gagtgtcgtctcagggacatgacttactctgcaccaatcacagtggacatcgagtacacc
cgtggcagtcagagaatcatccgcaatgctctgcccattggaaggatgcccatcatgctg
cgcagctctaactgtgtcctcacggggaagacgtccatggagtactccaaactcaacgag
tgccctctggatccagggggctatttcattgtcaaaggtcaggagaaggtcattctgatc
caggagcagctgtcaaagaaccgcatcattgtggagcaggacaggaagggggcagtagga
gcctctgtgaccagttccacccatgagaagaagagcaggaccaatatgatcgttaagcag
ggccgcttctacctgagacacaacgcactgtcagaggacgcccccattgccattatattc
aaggctatgggtgtggagagtgaccaggagatagtgcagatgattgggacagaggagcac
gtcatggctaacttctcccccagcctggaagagtgccagaaagcccagatcttcacagag
atacaggctctgaaatacattgggaataaggtgcggagacagcgcatgtggggagggccc
aagaagaccaagatggaggaggccagagagctgttggcttccctcatcctcactcatgta
cctgtgaaggagtttaacttccgggccaagtgtatctacctagcggtgatggtgcgcagg
gtgatcctagcccaaggagagaacaaggtggacgacagagactactatggcaacaagcgc
ctggagttggctggacagctgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaagaagatctcagaccagatcatccccaagcagcgggcggcacagtttgac
attgtcaaacacatgcgccaggaccagatcaccaacggcatggtcaacgccatctccacc
gggaactggtccctgaagaggtttaagatggaccgtcagggtgtgacccaggtgctgtcc
cgtctctccttcatctctgctctgggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcggaccccgctctctgcagccctcccagtggggcatgctgtgcccc
tccgacacccctgagggagaggcctgtggtctggtgaagaacctggccctgatgacccac
atcaccacagacatggaggacggccccatcgtcaagctggccttcaacctgggagtggag
gatgtcaacctgctgtgtggagaggagctctcctacccaagtgtcttcctggtcttcctc
aatggtaacatcctgggggtgatccgggaccaccaaaggctggtgtacaccttcagactg
atgcgacgggccggattcatcaacgagtttgtgtccatctccaccaacctaaccgaccgc
tgtgtctacgtctcctcagacggaggacgcctctgcagaccgtatatcattgtgaagaaa
ggacagccgatggttaagaacaaacacatcgaggagttgacccagggatacagaaccttt
gaggatttcctccatgagagcctggtggagtacctggacgtgaacgaggagaatgactgt
cagatcgccctctatgagcacatgattaataaggacactacacacttggagattgagccc
ttcacactactaggggtctgtgctggcctgatcccctacccccatcacaatcagtccccc
aggaacacataccagtgtgctatgggcaagcaggccatgggtacgattggctacaaccag
aggaaccgtatagacactctgatgtacctgctgggctaccctcagaagcccatggtcaag
actaggaccatagagcttatagactttgagaagctgcctgcgggccagaacgccacagtg
gctgtgatgagctacagcggctacgacatagaggacgctctgatcctcaacaaggcctct
ctagacagaggatttggaagatgcctggtctacaagaacgccaagtgcacgttgaggcgc
tacaccaaccagacctttgacaaggtgatgggtcccatgctggacgcggccacacgcaag
cccatctggaggcacagtatcctggatgctgacggcatctgctgccctggtgagaaggtg
gagaataagcaggtgctggtgaacaagtccatgcccactgtcacccaaacaccactggag
ggcagtgcccagccaggacagccccagtacagagatgtgcccgtcagttacaagggctcc
acagactcctacattgagaaggtgatgatctcctccaacgcagacgatgctttcctcatc
aagatcctgctgagacagaccaggagaccagagataggagacaagttcagcagtcggcac
ggacagaaaggtgtgtgtggccttatcgttcctcaggaggacatgcccttctgtgactcg
ggcatttgccctgatatcatcatgaacccgcacggctacccctccagaatgacggtgggg
aagctgattgagctgctggctggcaaagcgggggtgatggacgggaggttccactacggc
acggctttcgggggcagcaaggtaaaggacgtgtgtgaggacctgatccgctatgggtac
aactaccagggcaaggattacgtcacctcgggcatcactggagagccaattgaggcctat
atctactttggacctgtgtattatcagaagctaaagcacatggtgctggacaagatgcac
gccagagcccgcggccccagagctgtgctcaccagacagcccacggaggggcgctctaga
gacggaggcctacgtctgggggagatggaacgtgactgtctgattggctacggggccagc
atgttgctgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgcggt
cagtgtggcctgctgggatactccgggtggtgccactactgtaagtcctcctgtcacgtg
tcctcgttgcggataccctacgcctgcaaactgctcttccaggagctgcagtccatgaac
atcattccccgcctcaaactggcacgctacaacgagtaa
DBGET
integrated database retrieval system
