Salmo trutta (river trout): 115197490
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Entry
115197490 CDS
T08542
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115197490
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115197490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
TrmB
Motif
Other DBs
NCBI-GeneID:
115197490
NCBI-ProteinID:
XP_029614936
Ensembl:
ENSSTUG00000015309
LinkDB
All DBs
Position
7:44779316..44799092
Genome browser
AA seq
468 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDICNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELA
HSGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSVSVSSINRVLRNLASEK
QQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNG
EDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGS
MLGRPDTALTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTP
PHMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgacatctgtaacgaaggtcacagcggagtgaatcagctcggcgga
gtgttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgct
cacagtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaa
gttcaagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcaga
tactatgaaaccggctccatccgaccaagggcgatcgggggtagcaaaccaagagtagca
actcccgaggtggtcggaaaaattgcagtatacaagagggagtgcccttcaatcttcgcg
tgggaaattcgtgacagactgctatcggagggggtctgcacaaacgataatatacccagt
gtaagttcagtgagtgtgtcgtcgataaacagagtactgcgcaacctggctagcgagaag
caacagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactggg
acgtgggggacccggccgggctggtaccccggaacctcagtgccaggacagcccaaccca
gatggttgtccacagtcagacggtggaggtgagaacactaattcaataagttcgaatgga
gaagactcggatgagacccaaatgagacttcagctcaaaagaaaactgcaaaggaaccgc
acttcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactat
ccagatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaata
caggtgtggttttcaaatagaagggcaaagtggaggagggaggagaaactacggaatcaa
agacgacaagccagtaactcttctagtcacatccctatcagcagcagtttcagcaccagt
gtctaccagcccatcccacagaccacagcaccaggttggatgtcgttctcgtcaggatcc
atgttgggaagaccagacacagcccttacaaacacatacagtgccctgccgcctatgcca
agcttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctac
tcctgcatgctgcccaccagtccctcagtcaatggacggagctatgacacgtacacccct
cctcatatgcaagcacatatgaacagccaatcaatggctggttcaggaggcaactcaaca
ggtctcatctctcctggagtatctgttcctgttcaagtcccaggcagtgaagcagacatg
tcgcagtactggcccaggctacagtag
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