Salmo trutta (river trout): 115197499
Help
Entry
115197499 CDS
T08542
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115197499
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115197499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
115197499
NCBI-ProteinID:
XP_029614973
Ensembl:
ENSSTUG00000023755
UniProt:
A0A674AKE2
LinkDB
All DBs
Position
7:45410602..45447155
Genome browser
AA seq
1783 aa
AA seq
DB search
MLLFQIATLLCACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSANSTCGLHRPEPFC
IVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGPMQ
KVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCNHN
TMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGVCN
GCQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCHCDPVGSLNGGICDKMTDVSSGLIA
GQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGDCYCKRQ
VTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCRQHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSRYA
VLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGDLA
TSSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSISALLHQGAKACQCDPQGSLSTVCD
ASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHAFCHEATGQCACIPGA
YGRQCNHCLPGHWGFPNCRPCTCNGHTEQCDPYTGECLVCREQTTGHNCERCLEGYYGDP
VLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICSPGYRGARCEECAPGYYGN
PHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQNC
RKCVCNHLGTNPATCPAVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKRGCESC
DCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQQC
NKANGHCVCLEGVSGPRCNLCARGYSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVNKV
NTIKASGITGPYKHAIDNMEQSAGSIRTILAQNPATQPLSEIQQLLEQATDLMEEMSNKL
NLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVTKY
YQQSLDAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHAKRLDDLADR
LETLDLSELSEKTCGSSAGEACADSPCGGLSCVDSEGNRRCGGEGCDGLVTLANNAWHKA
KDFDQEILTAMEEVDKLSKMVSEAKVKAVEAKLSAQDVLLKTNETKQRVDQSNEELRSLI
RQIKDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILNQS
ADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKLATTDIKGTN
DLLSSVESETADSEFKLNNATQRLLWLEKDITLLKEKAMNTSLSSEQTERDAESINKVAE
QVKKDLDSELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKDLE
KSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgttgctatttcaaattgcgaccctgctatgcgcgtgcgtccttgcccaggtaccagag
ttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctcatcggc
agagcccaccaactctctgccaactccacatgcggcctccaccggcccgagccgttctgt
atcgtcagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgacgtctat
gtcaaaagcgtggttaacgccaccaccggccaccgggtggagaatgtcgtgaccacattc
gcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtgaccatc
cagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaagaccttc
cggcctgctgccatggtgattgagcggtcggctgactttgggaagaactggcaggtgtac
cgctacttcgcctacgactgtgagtcagcattccctgccatatcctcggggcccatgcag
aaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgacagaggga
gaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagccccaga
atccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaagctgcacacactg
ggagacaacctgctggactcccgcatggagatcaaggagaagtactactatgctgtctac
gacttggtggtacggggaaactgcttctgctacggacacgcctccgagtgcgcgcccgtc
gatggcgctggggatgttgttgagggaatggtccatggccactgtatgtgcaaccacaac
accatggggttgaactgtgagaagtgtcaggacttctaccatgacctgccgtggagacca
gccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactcagactcg
tgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtgtgtaat
gggtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctacttccag
cacccagagagggacatccgtcaccccagtatctgtgaaccgtgtcactgtgatccggtg
ggctctctaaatggtgggatctgtgacaagatgactgatgtgtcgtctggactgatcgct
ggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaacaggcc
cactacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgccctgggg
acagttcctggagggagcccatgtgatacagactcaggagactgttactgcaaacgccag
gtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaatgacatg
gatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgttcccag
gagactggtcagtgtgtgtgtcgacaacacatgtttggccggcgctgtgaccaggtggag
tcaggcttctacttcatcgccctggaccactacacctacgaggcagaggacgccaaattt
ggacctggtgtgacagtggtgcagagaccccaccctcaggaccgtagccccacctggaca
gggataggtttcgtcaatgttcccgagggggcctacctggagttctccatcgacaacatc
ccccactccatggagtacgacatcctcatccgctacgagcctcagttaccagaccagtgg
gaggaggtgttgatgacagtgatgcggcccagtgtgatttcagctgacagtcgctgtgcc
aacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacgatatgca
gtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctgagtctg
cccctctactcagcactcagtgacgtccagtccccatatacactcatagactcgattgtg
ctgatgccccactgtaagaacctggagatcttcactggttctgagggcggtgacttggcc
accagcagtgcctgggacaccttccagcgctaccgctgtctggagaacagtcagagcgta
gtgaagaccccgtccacagacatctgccgcaactttattttcagcatatccgctctgctg
caccagggagctaaagcatgccagtgtgacccgcagggctctctcagcacggtgtgtgat
gccagtggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgacaaatgt
tcccctgccacctacctgtttggacccagtggctgcagatcctgtgattgcaatccccag
ggatcggagcatgcattctgccatgaggctactggccagtgtgcttgtatccccggggca
tacggccgtcagtgtaaccactgtttgccgggacactggggcttccccaactgtcgcccc
tgcacctgcaatggccacactgagcagtgtgacccctacactggagaatgcctggtctgc
cgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactacggcgaccct
gtcctgggttcaggggaccactgtcgtccctgtatgtgtccggacgggccaggtagcggg
cggcagtttgccggtggatgttaccacggtctggactctcactaccaggtgttttgtatc
tgcagccctggatacagaggtgccagatgtgaggagtgtgccccaggttactatggaaat
ccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgacatgctg
gaccaggagtcctgtgatgccaggacgggtgaatgtctcaaatgtctctaccacaccgag
ggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaaaattgc
agaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcagtgggcgac
tgccactgtgatctgggcagcgggcagtgccagtgtctaccaaatgtggtgggtcagcac
tgtgaccagtgtgcccccgacacctggaacatggccagcaagaggggctgtgaatcttgc
gactgtgaccccaaccactcatttggaacgtcctgcaacgagctgagtggccagtgctcc
tgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagctgttctggggagac
cctgaagtcaaatgcaatgcgtgcgactgtgacccacaaggcattgccgagcagcagtgc
aacaaggccaatggtcactgtgtgtgcttggagggtgtgtctggtccccgctgtaatctc
tgcgcccggggctactctggcaccttcccctactgcgaacgctgccaccagtgcttcgcc
gactgggatgtgatcgtaggtcagctgaccaaccagacccacaggctggtcaacaaggtg
aacaccatcaaggccagcggcatcaccggaccatacaaacatgccatagataatatggag
cagagcgccgggtccataagaactatcctggcccagaacccggctacacagccactgtca
gagatacagcagctactggagcaggccacagatctaatggaagagatgagcaacaagttg
aacctcactgaggaggcattggcccaagtatcatctgatgacaacagcaccaacaccaaa
ctggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctgctggac
caagttgagctaatcaagaactctgatgttcggggagcgacagacagtgtcacaaagtac
taccagcagtctctggatgctggggctcaggccaacgcctccaccaccgacccaggcaac
cccgtggagagctctttcgttctacgacaagctacggaggacaagatgaacgacaccagg
gacgagttccacaggaggcaggaagaacacgccaagagactggatgacctggcggatcgg
ctggagacattggacctatcagaactcagcgagaagacgtgcggcagctctgctggtgag
gcgtgtgcagactctccgtgcgggggtctgagttgtgtggactctgaggggaacaggagg
tgtgggggcgaggggtgtgacggtctggtcaccctggccaacaatgcctggcataaggcc
aaggactttgaccaggagatcctcacggccatggaggaggtggacaagctctccaagatg
gtgtcagaggccaaggtgaaggcagtcgaggccaagctgagtgcccaggacgtgctgctg
aagacaaacgagaccaagcagcgcgtggaccaaagcaatgaggagctgcgcagcctcatc
cgacagatcaaagacttcctcacacaggatgcagcagacatggagagcatcgaggcagtg
gccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaatctgaca
gacgagatcagggagagggtgcgagacctggcccaagtggagactatcctcaaccagagc
gctgacgatgtgcagagagccgagaacctactgaagcaggcaggcagagccagtaaagag
gccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggctgagcgt
gcccagaaagcagcagccgaggccatcaaactggccaccaccgacattaaaggcacaaat
gacctcctgtcctcagtggagtcggagacagcggactcagagttcaagctgaacaacgcc
acccagaggctgctgtggttagagaaagacatcacactgctcaaagagaaggcaatgaac
acctcgcttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtagctgag
caggtcaaaaaggacctggactcggagttgaaggataagtacagcaccgtgcaggacctg
atcaaacaggaggccgggggcgtggccgacgccaagaagagggcggagcttctacagcag
gaagccacagaccttctgctacaggccagtgacaagctgcagctactgaaagatttagag
aagtcctatgaggacaaccagaagactctggaagacaaggccaaccagttggtggatctg
gagaaggctgtcaaagagctgctgcaggagatcagtcacaaagtcaccgtgtacagcacc
tgtctgttttaa
DBGET
integrated database retrieval system