Salmo trutta (river trout): 115197506
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Entry
115197506 CDS
T08542
Symbol
amfra
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115197506 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115197506 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115197506 (amfra)
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
115197506 (amfra)
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115197506 (amfra)
Multi subunit type E3
ERAD complex
115197506 (amfra)
LMBR1L-GP78-UBAC2 complex
115197506 (amfra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
RING_Ste5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115197506
NCBI-ProteinID:
XP_029614980
LinkDB
All DBs
Position
7:complement(45775517..45797833)
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AA seq
630 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSAVFLTGSILSGYCTVPEPVEYTQTQSSTPVESDDVDEDP
ITSLSDVAATVRLYLVSDTVFVWVMVNTACCVLMLIAKVIQCVVFGPLRVSEKQHLKDKF
WNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAVLVFMHLMVQLCKDRFEYLSFSPTTPMGS
HVRVLTLLVGMLLTCCGLALLCGLLGNPHGVHTVAFMAAECMLVSVRTGHVIIRYSIHLW
DLNHEGTWESKGSYVYYTDFVMELALLGLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLF
HEVQKRIRRHKNYLHVINNMEARFAVATSDELVANNDDCAICWDSMMTARKLPCGHLFHN
SCLCSWLEQDTSCPTCRMSLNISEGAGGEREERQREPMLEDNMGPGGPGPEARPHLNQHN
HFFHFDGSRIASWLPSFSVEVMHTTNILGIVQQVNNSQLNAMAHQIGEMFPEVPYHLVLQ
DLQLTRSVEVTTDNILDGRIVVPFPIQPVDHSASQVNPSPQDVGGASGSSEFVTPEVEDF
DVRGSRFSKSAEERQKILLQRKDELLLRAQRRYLSKSPEENAAAMNDDDEYDEGLPSLED
DIPAGSVLDSMTLRRRKLAAAAERRMHAYQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctgtttttggagagatttccatggcccagtttgcagacatacacagctctg
agtgctgtatttctcactgggtcaatattgagtggctactgtactgtcccagagccagta
gagtacacacagacacagagcagtactcctgtagaaagtgatgatgttgatgaggaccca
atcaccagccttagcgatgtggcagccactgtccggttgtacctggtctcagacactgtt
tttgtttgggtgatggtgaatacagcctgctgtgtcctgatgctgattgcaaaggtgatc
cagtgcgttgtctttgggccgctccgtgtcagtgaaaaacagcacctgaaggacaagttc
tggaacttcatcttctacaagtttatcttcatcttcggggtgctcaacgttcagacggtg
gaggaggtggtgatgtggtgtctgtggttcgctgtcctcgtcttcatgcacctcatggtc
cagctctgcaaggaccgctttgaatatctgtcattctcacccaccactcctatgggcagc
catgtgagggttctgaccctgctggtgggtatgctgctgacctgctgtggcctggctctg
ctctgtggtctgctgggaaatccccatggcgtgcacaccgtcgccttcatggccgctgag
tgtatgctggtgtccgttagaactggacatgtcattatccggtactctatccacctgtgg
gacttaaaccatgagggcacctgggagagtaaaggatcctacgtttactacactgacttt
gtgatggagctggctctgctggggctggacctcatgcaccacatccacatgctgctgttt
ggtaacatctggctctctatggccagcctggtgatcttcatgcagctgcgttacctgttc
catgaggtgcagaagagaatccgtcgccacaagaactacctccatgtcatcaacaacatg
gaggccaggtttgctgtggccacctctgatgagctggtagcaaacaatgatgactgtgct
atctgctgggactccatgatgacagcacgcaaactgccctgtggacatctcttccacaac
tcttgcctgtgttcctggttggagcaggacacgtcgtgtcccacgtgccgtatgtctctg
aacatcagcgagggggctggaggagagagagaggagaggcagagggagcccatgctggaa
gacaacatgggccctggaggccccgggccagaggcaaggccacacctcaaccagcacaac
cacttcttccactttgacggttctcgcattgccagctggctgcccagtttctctgtggaa
gtgatgcacacaaccaacatcctgggcatcgtacaacaggtcaacaactcccagctcaat
gccatggcccatcagatcggggagatgtttccggaggttccctaccatcttgtgctacag
gatctgcagctgacccgctctgtggaggtcaccactgacaacatcctggacggacgcatc
gtggttcctttccccatacagcctgtggaccactctgcctcccaggtcaacccctcccca
caagatgtgggtggggccagcgggagttcagagttcgtgacccccgaggtggaggacttt
gatgtcagaggcagccgcttctccaagtcagccgaggagagacagaagatactgctacag
aggaaagatgagctactgctacgagcacagaggagatatctgagcaagagcccagaggaa
aatgctgctgctatgaacgacgatgatgagtacgatgaaggtctgccctctcttgaggat
gacatcccagcaggctcagttttagactctatgaccctgcgacgcagaaagttagcggca
gctgctgagcgccgcatgcacgcgtaccagtga
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