Salmo trutta (river trout): 115197511
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Entry
115197511 CDS
T08542
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115197511 (tdrd12)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
115197511 (tdrd12)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115197511 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115197511
NCBI-ProteinID:
XP_029614986
Ensembl:
ENSSTUG00000027377
UniProt:
A0A674AX64
LinkDB
All DBs
Position
7:45865304..45892288
Genome browser
AA seq
1533 aa
AA seq
DB search
MLEINMLKVENPSCLWGRFVKGPGIEAIENKKKYDDLQMKMNLFYHEVNLDVQKIKPSTI
EAGQVCVVYWSALRSWCRAIVESLFLGTVGTQAMCFLVDHGERVIVSSDEIRALLDKFLQ
LPFWVRKFQLAGVHPMTLHVSGDCLEKAELIPSTQWDSSATRYLHNLLQASTEMEAVLCE
TQADCIAIELYLTVKNVKICVNDDLVSKKFAYFTSQKAHQTSGKNGVVDRSPAVLACDIF
SETQNFLATDGCTVRSLSDFLLWQQDPIVHNQVADQCQLTTSVKEASKASNEVSNPKKSL
ENGRNPLEGGKKKAAQQQNKKSKTFSENDGDEDESYDEPGEDTDTSLVSELFKNLNLLRF
MKFLNPASSTQRAAIPNTELIEQKEERGVQRISAITEKAEEEPVTAAQQIGQQTETAVCT
PSDLEDRTQEFVFTEQPTIEEELVCARLLQLLNPDSLNPDVDSSEVTIVHTDPSRSGIMV
HSAFTLDPCTSLANAPITDTFRRILMRKKYVGPSVAESYCWPAVARGCDTVLISHSGDQP
LTYIPPFLAHMQLSSVFSALSSRTGPIAVILCPGWEKAQTVIDLLEESQTVQVLHPMVIL
LGLGKDEAKTVKIQNNCQVVVTTPFSLVRLLRLHCFLFLRLCHLVLDEVDLLFSRAPDEM
TTILQHFQRVTASEERVSCPRQIIAVGKRWSRHLEGLLHNHMSNPTVVVTVMEEAALYGN
VHQIILLCLDCTKISVLLGALDFTPDVAQKTLVITNSSEEAEHVFKAVSSTSAFSLKVHE
ELTYQFDFVTEQWKKPIGPGTHVILVTTNECMKSLGICDATCVVHYGFPSSPKLFGSRLF
CMSQNFQNLSDKERAAESTAHPAKSVLLLSERNARHVIGVLRYLKRTEASLPPELLHFAQ
GVLRAKEEQKSDRPLCSYLKSFGFCRDSSVCSYRHCISPITDQPLQPDSGTIVVLPLFIK
TASVYYGRIVSKKEDSYESLAAEMTTYYAAEKLGAKEVLEGGLYGVQEDEVYHRVRVTSV
PDKGEWMFCSVRALFLDEGREQEVKSHQLLQLPAQFHTLPPQALEIIVCRAMPIDAEVKW
NPKVTRAISQKIKGLQHQAKVVLCLGNTVFVDPMVRMTRLPGLKTFINEYNVHAEILSTG
MGTCNPQHLDLLKELCQGAGPGASAGDAPLTTVPDDSGVTLEDKVQAAEEALVHRMRAAV
ERLHCGQEVSVDLPQTQTSVLHAQTDLSQCNMKASPDLDQKVFAHAPQPRMNHVFVYPTQ
LSPKPQEAPLAAVPDPSEAQLPTLMDRAQIPSPLPTPSEAQISAPLPTTSEPQLPAPTTM
HNDPKMEQWRSLIAKLQGATQTRRHTALQGFTPKDWISAVPRPIENGHLIDEKQVNGQQV
INCEKVISVDKVDVDAPKRYLSFHPQIKWFQRDDTVTLNIKLREPVDQRCEFFPDRVVYS
ACVNDRPYHADLELHSNITAERCSWEMKCNEPVIRLVKQERGDWKMLLKQKSAFVSLDFD
RFEEDEKKTSNGLCFVGHTGEEGCYVSSDSSSD
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaataaatatgttgaaagtggagaacccgtcctgtctgtggggtcggtttgtg
aagggtcctgggatagaagcgatcgagaataaaaaaaaatatgatgatctgcaaatgaaa
atgaaccttttctatcatgaggtcaacctagatgtgcagaagatcaaaccctcaactata
gaggcgggacaggtgtgtgtggtgtactggtctgccctaaggagctggtgccgagccatc
gttgagtctcttttcctgggtaccgttggaacccaggccatgtgtttcctagttgaccat
ggagagcgtgtcatcgtcagctcagatgagattcgggctctgttagataagtttttgcag
ctgcccttctgggtgaggaagtttcagctcgctggtgttcatcccatgacgctgcacgtg
tctggagactgcctggagaaagctgagctcataccatcaacgcaatgggacagctctgcc
acacgctatttgcacaatctcttacaagcttctaccgagatggaggcagtgttgtgtgaa
acacaggcagattgcattgccattgagctctacttgacagtcaaaaatgtcaagatctgt
gtgaacgacgatctggtctcaaagaagtttgcgtacttcacaagccagaaggcccatcaa
accagtgggaaaaatggtgttgttgatagatccccagccgtcttggcttgtgacatcttt
tctgaaactcagaacttcctggctactgacggctgcaccgtacgatcactttctgatttc
ctgctctggcagcaggacccaatcgttcataatcaagtggctgatcagtgccagctaacg
acatctgtgaaagaggcatcgaaggcttccaatgaggtatcaaatccaaagaaaagtcta
gaaaatggaagaaatcccttagagggaggaaaaaagaaggcagcgcagcagcagaacaag
aaatccaagacgttttcagagaatgatggcgacgaagacgagagctatgacgagcccgga
gaggacaccgacacatctcttgtgtcagaactgttcaaaaatctgaatctgttaagattc
atgaagtttctgaatcctgcttcgagcactcaaagggctgctattcccaacactgagctt
attgaacagaaggaggaacgtggtgttcagaggatctctgcgatcacggagaaagcagag
gaagagccggtcactgcagctcaacagatcggacaacagactgaaacggctgtatgtact
cctagtgacctagaagaccggacacaagagtttgtcttcacagagcagccaaccattgag
gaggagctcgtctgtgctcggttgttgcagttgctaaaccctgactctctgaacccagat
gtagactcatcagaagtcactattgtccatactgatccaagcaggagtgggataatggtg
cattctgcctttactctggacccctgcaccagtctggccaatgctccaatcactgacacc
ttccggaggatcttgatgaggaaaaagtatgtcggcccgtctgtggctgagagttactgc
tggccggcggtggccaggggctgtgacacggtcctcatctcccacagcggagaccagccc
ctcacctacatccccccgttcctggcccacatgcagctctcctccgtcttcagcgccctc
tcttctcgtaccgggcccatagcggtgatcctgtgcccggggtgggagaaagcccagact
gtgattgacctgctggaggagagccagaccgtccaggttctccaccccatggtcatactg
ttgggactgggaaaggacgaggcaaagactgttaagatccagaacaactgccaggtggtg
gtgaccactccattcagccttgtgcgtctgctgcgtttgcactgtttcctgttcctgcgg
ctgtgtcacctggtgctggacgaagtggacctgctgttttctagagccccggatgagatg
accaccatcctgcagcacttccagagggtgacagccagcgaggagcgtgtgtcgtgcccc
agacagatcatcgcagtgggaaagcgctggagccgccacctggagggcctgctccacaac
cacatgagcaaccccaccgttgtcgtcacagtgatggaggaggccgcactctacggaaat
gtgcaccagattatcctgttgtgtctggactgcactaagatctctgtcctgctcggggca
ctggacttcacccccgacgtggcccagaagaccctcgtcatcaccaactcttctgaagag
gccgagcatgtcttcaaggctgtttcaagcacatcggcgttctccctgaaggtccatgag
gagttaacctaccagtttgactttgtgactgagcagtggaagaagcccattggacctggc
actcatgtcattctggtcaccaccaatgagtgtatgaagtctttgggtatctgtgatgct
acgtgtgttgtgcactacggcttcccaagctcacctaagctgtttggcagccgtctgttc
tgcatgtcccagaacttccagaacctttcagacaaggagcgtgctgcagagagcacggcc
caccctgccaagtcggtgctgctgctatctgagaggaatgcccgtcacgtaatcggggtc
ctgcgctacctaaagcgtactgaggcctcgctgcctccagagctgctgcactttgcccag
ggagtcctgcgggctaaggaggaacagaagtcagacaggcctctgtgcagctacctcaag
agctttggcttctgcagggacagcagtgtatgttcttatcgacactgcatcagccccata
acagaccagccactgcaaccagactctgggactattgtggttctgcccttgttcatcaag
actgcttctgtctactatggacgcattgtgagtaagaaggaggacagttatgagagcctg
gcagcagagatgactacatactacgccgctgagaagctgggtgctaaggaggttctggag
ggagggctgtacggagtacaagaggatgaggtctaccacagggtgcgggtgacttcggtg
ccggacaagggtgagtggatgttctgcagcgtgagggctctgttcctggatgaggggcgt
gagcaggaggtgaagtcccaccagctgctgcagctgccggcccagttccacacactgccg
ccccaggctttggaaatcattgtctgcagggccatgcccatcgacgctgaggtcaaatgg
aaccccaaggtcaccagggccatcagtcagaagatcaaaggcctgcagcaccaagccaag
gttgttctgtgtttgggaaacacggtcttcgtcgatcccatggtgcggatgacccgacta
ccaggtctgaagaccttcataaatgagtacaacgtccacgctgagatcctgagcacgggg
atgggcacctgcaaccctcagcacctggacctgctgaaggagctctgccagggggctggg
cctggagccagtgctggggatgccccgctcaccacggtgccggatgactctggggtgacc
ttggaggacaaggtacaggctgcagaggaggccctggtccacaggatgagggcagctgtc
gagcgcttacactgtggccaggaggtttctgtagacctgccccagacccaaacgtctgtg
cttcatgcccagacagacttgtcccagtgcaatatgaaggcctcaccagatctggaccag
aaggtctttgctcatgcaccccagcctcggatgaaccatgtctttgtatacccgacccag
ctctcgcccaagccacaggaggccccattagcagcagttcctgatccaagcgaggctcaa
ctaccaacactcatggacagggcccagataccttcccctctcccaacacctagcgaagcc
cagatatctgccccactcccaacaactagcgagccacagttacctgccccaacaaccatg
cacaacgaccccaaaatggagcaatggaggagcctcatagctaaactccaaggcgccact
caaacacggaggcatacagctctacaaggattcacccccaaagactggatttctgcagtt
ccccgccccattgaaaatggtcatttgatcgatgagaagcaagtcaacggccagcaagtc
atcaactgtgagaaagtcatcagtgttgacaaggttgatgtggatgcaccaaaacggtat
ttgagtttccatccacagatcaagtggttccagagagatgacacagtcacactgaacata
aagctcagagaaccagtggatcagagatgtgaattcttccctgacagagtggtgtacagt
gcgtgtgtgaatgacaggccttatcatgctgacctggagctccacagtaacatcactgca
gagaggtgctcctgggagatgaagtgcaatgagccagtcatcaggctcgtcaaacaggag
aggggagactggaagatgctcctcaagcagaagagtgcttttgttagtttggatttcgac
cgatttgaggaagatgaaaagaagacttcaaatggtctctgctttgtggggcacactggg
gaggaaggctgctacgtgagctcagacagtagcagtgactga
DBGET
integrated database retrieval system
