Salmo trutta (river trout): 115197522
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Entry
115197522 CDS
T08542
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115197522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115197522
03036 Chromosome and associated proteins [BR:
stru03036
]
115197522
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115197522
Coactivators
SAGA/TFTC/STAGA complex
115197522
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115197522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
115197522
NCBI-ProteinID:
XP_029615002
Ensembl:
ENSSTUG00000028474
LinkDB
All DBs
Position
7:46292940..46309090
Genome browser
AA seq
1000 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLVSQKTSPATYSNIKREGSTGAVSQFSGK
LRDQAGSLEPPQQGHPKAALNAEPIANQAMSNKIISASTSSIATGGVLNAGTNLQTYGAA
SQTISTAPPGSVTLPAQSTSFNRGTVLGPAGTSVVTVPNPNITTTTTTTTIRTASPGSQS
FNGNTGAVKLVNSPAASQVGSGSSSTVVSTVSAGNSNIIVSMTSQPPPLPNFTGPQQSAV
ATTPTIALQRQPSPMAIASQNGVIDPKVSAVVTQGAGSLGATTSQVMNHSNTLMHTKMVA
PNQPVSAGQSIILGGSPPPVVVNSPISQAQSVASPTLTAGVKPTVNGVGQPTVTIVRPPG
APVMATPVQQQRPGLLASTTRTAAPQLAVRPPQKTTIQLPPGFTIPPGMVLVRTDTGQLV
MVTQQVLAQAQAKTQQGQAAVSNISPQPGIPTAGANIRVSTPSQAPGTPQAVRLASPFQA
RMAQSPSPSSPAIQKAITVAPAGASVSVKMTTPQKAQSVITGGQALVKPGAVRPTITLNT
AAASASGTPIATVSQEMQENVKKCKNFLSTLIKLASHNSPSPDTSKNVKTLVQDLLDAKI
EPEEFTTSLQAELKSSPQPYLIPFLKKSLPALRLSLLNNQQSLLASTSASALAVPSTSTI
RPRLPTTISPATGIVRTPTTALGVRRPGVQGVQTRMPMVITQTIRPQGVVTRGPAIIPGR
SPVGIGAQASANQKKLNEPGGGTFRDDDDINDVASMAGVNLNEENARIMATNSELVGTKI
RSCKDEAFLPPGLLHRRIMEAAKRFGVTEVPAETVNYISHATQARLRSMLEKVSTIAQHR
TDGGKDEEWYEPSTDVRAQLRFFEQLERMEKQRKDEQEREVLLKAAKSRARQEDPEQARL
KAKAKEMQQAEQAQIRQREANLTALAAIGPRKKRKMDSPGGSTSGTEVASGSGDGSSTAA
SSRQQLRQRITRVNLRDFIFCLEQERATSRSLLLYKALLK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagacgaaaaagct
gtaagcgacttagtgggctctttggaatcgcaacttgtcagccaaaagacttcgcccgcc
acatattctaatatcaagcgagaaggatctacgggcgctgttagccagttctcagggaaa
ctgcgtgatcaagcggggtctctggagccgccacaacaaggacacccaaaagcggcgtta
aacgcggaacccatcgcgaatcaggcgatgtccaataagattatcagcgcttctacctct
tccatcgctactgggggtgttttaaacgctggtaccaatctacaaacatatggagccgca
tctcaaaccatttccaccgcaccaccaggatcggtaactttgcctgctcagtcgactagc
ttcaacagagggactgttttgggtcctgctggcacatcggtggtgactgttcccaatcca
aacatcacaacaacaacaacaacaacaactatcaggactgcttcacctggttcacagagt
tttaacggtaacactggagctgtgaagttggtcaactcgccagcagcttctcaagtcggg
tcaggcagcagcagcactgttgtaagtactgtcagtgcgggcaattccaatatcattgtg
tccatgacttcacaacctcctcctctgccaaactttactggacctcaacaatctgcagtc
gctactactcccactattgcattgcaaagacagcccagccccatggccattgcctcacag
aatggagtaatagaccccaaggtttctgcagtggtcacacagggtgcaggttccctaggg
gccaccacctctcaggtcatgaaccacagcaacactctcatgcacactaaaatggtggca
cccaaccagccagtctctgctggccaatcaataattctcggagggtctccccctcctgtt
gttgttaactcaccaataagccaggcacagagtgtggcgagtcccactctcacagctggg
gtgaaaccaactgttaatggagttggtcagcccacagtgaccatcgtgaggccccccggt
gcgcctgtgatggctacccccgtacagcagcagagacctgggctgttagcaagtaccacg
aggactgctgcaccacagctggccgtcagaccaccacaaaagaccaccattcagttaccc
cctggatttaccataccacccggtatggtgctggtgcgtacggacacgggccagctagtg
atggtgactcagcaggttctagcccaggcccaggctaagacccaacaaggccaggctgct
gtctccaacatctccccccagcctggaatccccaccgctggggccaacatcagagttagc
actcccagccaggcccctggtacgccccaggctgtccgtctggcgtcccctttccaggca
agaatggcccagtccccctctccctctagccctgctatacagaaggccataaccgtggca
cctgcgggtgcgtctgtgtcagtgaaaatgaccacccctcagaaggcccagtctgtgatc
acagggggccaggccctggtcaagcctggtgctgtacggcccactatcaccctgaacact
gcagcagccagtgcctctggaacccctattgcaacagtctcccaggaaatgcaagagaat
gtgaagaagtgcaagaacttcctgtccaccctgatcaagctggcatcccacaactccccc
tcccctgacacatctaagaacgtcaagaccctggtgcaggatctactggatgctaaaatc
gagcctgaggaattcaccacgagtctgcaggctgagctgaaatcctctccacagccgtac
ctcatccccttcctcaagaaaagccttcctgctctgcggctgtcccttctcaacaaccag
cagtctcttctggcctccacctccgcttctgccctggccgtcccctccacctccaccatc
aggccccggctccccaccaccatcagccccgccacgggcatcgtcaggacacctaccact
gccctgggtgtgagaagaccaggggtccagggggtccagacccgcatgcccatggtcatc
actcagaccatacgaccgcaaggcgtagttacaagaggacccgctattatcccgggcaga
agtcctgtgggcattggtgcccaggcctctgccaatcagaagaagctgaatgagcctgga
ggtgggacgttcagagatgacgatgacatcaatgacgtggcgtccatggcgggggtaaac
ctgaacgaggaaaacgcccgcatcatggccaccaactctgagctggtgggcaccaagatc
cgctcctgtaaggacgaggccttcctcccgccaggcctgctgcacagacgcatcatggag
gctgccaagaggtttggggtgaccgaggtcccagctgagacagtgaactacatctcccat
gctacccaggccaggctgagatccatgctggagaaagtgtccactatcgcccagcaccgc
accgacgggggcaaggatgaggaatggtatgagccgtcgacagacgtcagggcccagctc
cgcttttttgagcagctggaaaggatggagaaacagaggaaggacgaacaggagagagag
gtcctactcaaggctgccaagagtcgcgccagacaggaggacccagaacaagctcggttg
aaggcgaaagctaaggagatgcagcaggcagagcaggcccagatccgacagcgtgaagcc
aacctcactgccctggctgccatcgggccccgtaagaaacgcaagatggactcgccaggg
ggctccacatcgggcacagaggttgcttcgggttcaggggatggctcttccacagctgcc
tcctcccgccaacagctccgtcagcggatcacgcgagtcaacctcagggactttatcttc
tgcctggagcaggagagggccacatccaggtccttattgctttataaggctctcctgaag
tag
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integrated database retrieval system
