Salmo trutta (river trout): 115197537
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Entry
115197537 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115197537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115197537
03036 Chromosome and associated proteins [BR:
stru03036
]
115197537
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115197537
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115197537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
RMD1-3
TTC22_C
Motif
Other DBs
NCBI-GeneID:
115197537
NCBI-ProteinID:
XP_029615032
LinkDB
All DBs
Position
7:complement(46657295..46692088)
Genome browser
AA seq
1389 aa
AA seq
DB search
MAAVLERSFIEISGFERETLPTFREITLNLGLNALPGSVIYPDSAGGFHYEGSGKLLSIT
SNRFIHWSTSGDTVQLVEQSLDTNLLNNAVKLKITHCPLLPGGVHVQETLNNVTILIVTN
QTVHRLVLPHPTRMYRSELVTELQMQSIFTDVGKMSLQDPAHSAVIPSPVGQTVGPTASA
AWLSHQGEAHYALASPAGGILVVTLPPHDTKASVTILELKTSSVMQRLAGWMPTAIRGEQ
SPGDLALSLAVRELEDDTFILALCQDHKLRMWSYRDQACLMEADMLEYMPACRGVTRSSG
QGHRLRLTFSSTGLCLAIYLAVPSRGQFTVLQLVATDNNRYSLDHISSLFATQETLVDFA
LTSTDIWGLWLDDTNQTVVKYINFEHSTVGQWNQVFVQPAPEEEVHIGADQDPRETYLDM
LFSPLRFTASALVKALQIYRRGTERITDLPWETLKKEVTVAVEKELQSSVTEFEFSQEEY
RQLQVEFWSKFYACCLQYQEALATPLGLLLNPHTHMVCVLKKGFVSFLVPCFPVEHLYLS
FDEYLFSEEETHVAEDPEVGRDVLQLVQCLRLVSDAVPGDMAYEMEKALEHLQSPERAAE
MVLENLLANDNENVIEDIHNKLQDVRNPLAAMAVLIREMDLETDSEPGEGSLTIGQSLSW
RISLSQLYGSSVAVAVVCQAVCQMAMTRALFCRDLLILQQLYLRLGDNVFPGGGPQLQQD
LIPRSSQLLSSYYLLKHITQSLTTTVPLDIIDANLQHLSVLELSDSPAMASNRSVRSPQT
VVELFYQSVARKAIITQIYSKQHSPSPGTALLHWPHMVSSVVTLLAQQLWPNNLGFQFPE
CLMGNCQYAQLQEYVRLIEPWCQVNVGSCRFMLGQCYLANGEGQKALQCFQEAAVEVERE
EFLLRLTGAEEKAAAAPRLQYYNKVLRLLEDVGLPELVIHLATLAITEAVNDPRSQAALW
TRIFKHHLDLGHNSQAYEALTQNPDSSSQLDCLRQLVVVLCERSQLQDLVQFSYVNLHDE
VVSIIESRARAVDLMSHNYYELLYTFHINRHNYRKAGTVMFEYGMRLGREVRTQLGLQKQ
VNCCLASLNCLRLIRSDYAWIVQPTSGAVYERPAASPKRNYDGEFTTGPVSGQIDILELK
DLQKEYDLARSRLTLAQHHPPSAAIAGSASAVEMMSLLVQSGLFDCALSLCQTFKLSLTS
VFEGLAFKCIKLQYGGEENQNEAWNWLAANQLCTITTKESSATDEAWRLLASYLEKHPTQ
NAQHHRCVINKLLSHGVPLPDWLVNAYKGVDAAALLRLYLNYDLLEAAAGLVLEYVDALL
GKGHQYFGIERPLSATAPLVWLPYTSIDQLLQSLNETQTNARMYKKLQDKLNDYHKLVDQ
TTRRRLQAQ
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttttagaaaggagtttcatagaaataagtgggtttgagagggaaacccta
ccaacattccgggaaataactctaaacctaggtctgaatgctcttcctggcagtgtgata
tacccagacagcgcaggaggctttcactatgagggaagtggaaaactcctgtccatcaca
agcaacagattcatacactggtccacctccggggacacagtgcagctggtggagcagtct
ctggacaccaacctactgaacaatgctgttaaactcaagatcacacactgccctctgctg
cccggaggcgtacacgtccaggagaccctcaacaatgtcaccatcctcatcgtcaccaac
cagactgtgcaccggttggtgctgccacaccccacacgcatgtaccgcagcgagctggtg
acagagctccagatgcagtccatatttacagacgtggggaaaatgagtctgcaggacccg
gcccacagcgcagtcatccccagccctgtgggccagacagtaggccccaccgcctcagca
gcctggctcagccaccagggagaggcccattacgcccttgcatcacctgcagggggtatc
ctggtcgtcacactgcccccacacgacacaaaggccagcgtgaccattctggagctgaag
acaagctctgtgatgcagagactggctggctggatgccaactgccatcagaggtgagcag
agccctggggacctggccctgagtctggctgtgagggaactggaggacgacaccttcatc
ttggctctgtgtcaggaccataaactacgcatgtggtcctatagggaccaggcatgtctg
atggaggctgacatgttggagtacatgccagcgtgccggggggtgacgcgttcctcagga
cagggccatcggctgcggctaaccttctcctccacggggctgtgtctggccatctacctg
gccgtaccttccaggggacagttcactgtgctgcagctggtggccacagacaacaaccgc
tacagcctggaccacatctcctcactgtttgccacacaggagacactggtggactttgct
ctcacttctacggacatctggggcctgtggctggacgataccaaccaaaccgtggtgaaa
tacatcaactttgaacattccacggtaggtcagtggaaccaggtctttgtgcagcctgcc
cctgaggaagaggtccacatcggagcagaccaggaccccagggagacctatctggacatg
ctcttctcccccctgagattcactgcctctgctctagtcaaagccctacagatttacagg
agaggcacagagcgaatcactgatctcccctgggagaccctcaagaaagaggtgacggtg
gctgtggagaaggagctgcagagcagtgtgacagagtttgagttcagccaggaggaatac
aggcagctacaggtggagttctggtccaagttctatgcctgctgtctacagtaccaggag
gctctggccacaccgctgggcctgctgctcaacccacatacacacatggtctgtgtgctg
aagaagggctttgtgtcattcctggtgccctgctttcctgtggagcacctgtacctgtct
tttgatgagtacctgttctcagaggaagagacacacgtggctgaagacccggaggttggt
cgtgacgtgctgcagctggtgcagtgtctgaggctggtgagtgacgcggtgccgggggac
atggcctatgagatggagaaagccctagaacatctccagtcacctgagagggctgcggag
atggtgctggagaacttactggccaacgacaatgagaatgtgatcgaggacatccataac
aaactacaggatgtccgtaaccctttggcagccatggccgtgctgatcagagagatggac
ctggagactgactcggagccaggagaggggtctctcaccataggccagtccctgtcgtgg
cggatcagtctgtcccagctgtatggtagcagtgtggcggtggctgtggtgtgtcaggct
gtctgccagatggccatgaccagagccctgttctgtagggacctgctcatactgcagcag
ctctacctacgtctaggagacaatgtgttcccgggtggagggcctcagctacaacaggac
ctgatcccccgctcctctcagcttctctcctcctactatctcctcaaacacatcacccag
agcctgaccaccaccgtgcctcttgacatcatagatgccaacctgcagcacctgtcagtc
ctggagctgtctgattctccagctatggccagcaacagatcagtccggagcccccagacg
gtggtggagctgttctaccagagcgtagcgcggaaggccatcattacccaaatctactcg
aagcagcacagcccctccccgggcacagccctgctccactggccccacatggtctccagc
gtggtcaccctgctggctcagcaactctggcccaacaaccttggcttccagttccctgag
tgtctgatgggcaactgccagtacgcacaactacaggagtatgtgcgtctcattgagccg
tggtgtcaggttaacgtgggctcctgccgcttcatgctgggccaatgttacctggccaat
ggagagggacagaaggcactgcagtgtttccaggaggcggcggtggaggtggagagggag
gagtttcttctgagattgacaggagccgaggagaaagctgcggctgcaccgagactacag
tactacaacaaggtgctgcggttgctggaggacgttggtctgccagagctggtcatccat
ctagccactctggccatcacggaggccgtcaatgaccccaggagtcaggctgccctgtgg
acccgcatcttcaagcatcacctggacctaggacacaacagccaagcctacgaagccctc
acacagaaccctgactccagcagccagttagactgtttgcgtcagcttgttgtggttctg
tgtgagcgttctcaacttcaggacctggtccagttctcctacgtcaacctgcacgatgag
gtggttagcatcatagagtccagagccagagcagtggacctgatgtcccacaactactat
gagctgctctacaccttccacatcaacagacacaactacaggaaagcgggtacggtgatg
tttgagtacggcatgcgtctgggccgggaggtgaggacacagctgggtctacagaaacag
gtcaactgttgcctggcctccctcaactgtctacggctcatcagatctgactacgcctgg
attgtccaacccacctctggagcggtgtatgagaggcccgctgcatcaccaaagaggaac
tacgatggagagtttactactggtccagtgagtggtcagatagacatcctagagctgaag
gaccttcagaaggagtacgaccttgcccgtagccgcctcaccctggctcagcatcaccca
ccctccgctgccattgcaggcagcgcctctgcagtggagatgatgtccctactggtccaa
tcaggactgttcgactgtgccctctctctctgccagaccttcaaactctccctcacttca
gtcttcgagggacttgccttcaagtgtataaagttacagtacggtggagaggagaatcag
aatgaagcctggaactggctggctgccaatcagctgtgtaccatcacaaccaaagagtca
agcgcgacagatgaggcgtggcgccttctggcctcttacctggagaagcatcctactcag
aatgctcagcaccatcgctgtgtcatcaacaagctgctgtcacacggtgtgccactgccc
gactggctggtcaacgcctacaagggggtagacgctgcagcgttgttacggctctacctg
aactacgacctgctggaggcagcagctgggctggtgttggagtatgtagatgccctcctg
gggaagggacaccagtactttggcatcgagaggcccctctcagccacagcgccgttggtg
tggctcccatacacatccatcgaccagctcctccagtcgctcaacgagacccagaccaac
gccagaatgtacaagaaactgcaggacaagctgaatgactaccacaaactggtggaccag
acgacgaggagaaggctccaggcccagtag
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