KEGG   Salmo trutta (river trout): 115197615
Entry
115197615         CDS       T08542                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
stru  Salmo trutta (river trout)
Pathway
stru03266  Virion - Herpesvirus
stru04145  Phagosome
stru04148  Efferocytosis
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    115197615
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115197615
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115197615
   04148 Efferocytosis
    115197615
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115197615
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115197615
   04810 Regulation of actin cytoskeleton
    115197615
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115197615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115197615
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115197615
   04515 Cell adhesion molecules [BR:stru04515]
    115197615
   04090 CD molecules [BR:stru04090]
    115197615
Membrane trafficking [BR:stru04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115197615
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115197615
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin beta subunits
   115197615
CD molecules [BR:stru04090]
 Proteins
  115197615
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail I-EGF_1 PSI_integrin EGF_2
Other DBs
NCBI-GeneID: 115197615
NCBI-ProteinID: XP_029615170
Ensembl: ENSSTUG00000006028
LinkDB
Position
1:complement(47268434..47299631)
AA seq 789 aa
MGTFFDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEGQEFGQGGS
SVSRCDLKQNLLDGGCTKGGLEFPFSSLSVQENTPLSDKASGAADDVTQIRPQKLSLTLR
PDDARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGF
GAFVDKPLSPYMYTYPEEAISNPCHGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVS
RNRDSPEGGFDAVIQAVVCKDKIGWRTDASHLLVFTTDATTHVALDGRLAGLVQPNDGQC
HIGRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTL
SDDSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGD
TVSFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNG
TYECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPEDPICGGRGNCVCGQCSCHTSGF
GKVWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGL
LCSGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECQHFKRGRLFEEKSCAR
ICRDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDIL
VVLMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTF
TNVTYRGNS
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgggaactttttttgaccgactttggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaaggtcaggagtttggccaagggggctcc
agtgtgtcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaaggggggg
ctagagttccccttcagtagcctcagtgtgcaagaaaacacgcccctcagtgacaaggca
tcaggggctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgaga
ccagatgatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgac
ctgtactatcttatggacctctcctactccatgaaggacgacttggcccgcctgcgctcc
ctgggcaaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggcttt
ggggcctttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagcaatc
agtaacccttgccatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtg
ctgtctctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtct
cgtaacagagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaag
gacaagataggctggcgtacggatgcctcccacctgttggtgttcactaccgatgctacg
acacacgtagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgt
cacatcggcagagacaacaactatgacaagtcgtcaaccctggactacccctctctggct
ctgatcacagagaagatgtcggagaacaacatcaacctcattttcgctgtgaccaacaat
gtgatgcccctctaccagaactacagccagctgattcccggcaccacagttggaacgctg
tcggatgactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttcc
aaggtggaattggagttgctgggtgttccagaggagctggctctgtcgttcaacgccacc
tgcctcaacggagagctcatccagggactcaagtcctgctccggacttaagatcggagac
acagtgtctttcagtgtggaggcaaggttacgcggctgccctaaggagaagaaccgtacc
ttcaccattaaacctgtgggcttcaaggatgccctggaggttacggtccacttcgcctgc
gggtgtgactgtgaggccacagcccagcccgagagccctctctgtaaccaggggaatggg
acctacgagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgt
gccgacggggactacaggccctcagaccagggcaactgcagccccaaacctgaggacccc
atctgcggtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggcttt
ggaaaggtgtggggcaagtactgcgagtgtgacgacttcaactgcctgcgcttcaaagga
gagatctgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactgg
atgggggagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctg
ctgtgcagcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcc
tacggggccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaa
tgtgttgaatgtcagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccga
atctgcagggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtg
aactgcacctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgcc
agcggaaagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctg
gtggttctcatggcggtggcgggggccatcttgtttctgggactggctggcctgctcatc
tggaagctgctggtcaccgtccacgaccgccgagagttcgccaagtttgaggaggagagg
gctaaggccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttc
accaatgtgacctaccgtgggaactcttga

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