Salmo trutta (river trout): 115197615
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Entry
115197615 CDS
T08542
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03266
Virion - Herpesvirus
stru04145
Phagosome
stru04148
Efferocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115197615
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115197615
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115197615
04148 Efferocytosis
115197615
09144 Cellular community - eukaryotes
04510 Focal adhesion
115197615
09142 Cell motility
04820 Cytoskeleton in muscle cells
115197615
04810 Regulation of actin cytoskeleton
115197615
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115197615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115197615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115197615
04515 Cell adhesion molecules [BR:
stru04515
]
115197615
04090 CD molecules [BR:
stru04090
]
115197615
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115197615
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115197615
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115197615
CD molecules [BR:
stru04090
]
Proteins
115197615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_2
Motif
Other DBs
NCBI-GeneID:
115197615
NCBI-ProteinID:
XP_029615170
Ensembl:
ENSSTUG00000006028
LinkDB
All DBs
Position
1:complement(47268434..47299631)
Genome browser
AA seq
789 aa
AA seq
DB search
MGTFFDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEGQEFGQGGS
SVSRCDLKQNLLDGGCTKGGLEFPFSSLSVQENTPLSDKASGAADDVTQIRPQKLSLTLR
PDDARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGF
GAFVDKPLSPYMYTYPEEAISNPCHGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVS
RNRDSPEGGFDAVIQAVVCKDKIGWRTDASHLLVFTTDATTHVALDGRLAGLVQPNDGQC
HIGRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTL
SDDSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGD
TVSFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNG
TYECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPEDPICGGRGNCVCGQCSCHTSGF
GKVWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGL
LCSGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECQHFKRGRLFEEKSCAR
ICRDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDIL
VVLMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTF
TNVTYRGNS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttttttgaccgactttggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaaggtcaggagtttggccaagggggctcc
agtgtgtcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaaggggggg
ctagagttccccttcagtagcctcagtgtgcaagaaaacacgcccctcagtgacaaggca
tcaggggctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgaga
ccagatgatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgac
ctgtactatcttatggacctctcctactccatgaaggacgacttggcccgcctgcgctcc
ctgggcaaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggcttt
ggggcctttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagcaatc
agtaacccttgccatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtg
ctgtctctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtct
cgtaacagagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaag
gacaagataggctggcgtacggatgcctcccacctgttggtgttcactaccgatgctacg
acacacgtagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgt
cacatcggcagagacaacaactatgacaagtcgtcaaccctggactacccctctctggct
ctgatcacagagaagatgtcggagaacaacatcaacctcattttcgctgtgaccaacaat
gtgatgcccctctaccagaactacagccagctgattcccggcaccacagttggaacgctg
tcggatgactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttcc
aaggtggaattggagttgctgggtgttccagaggagctggctctgtcgttcaacgccacc
tgcctcaacggagagctcatccagggactcaagtcctgctccggacttaagatcggagac
acagtgtctttcagtgtggaggcaaggttacgcggctgccctaaggagaagaaccgtacc
ttcaccattaaacctgtgggcttcaaggatgccctggaggttacggtccacttcgcctgc
gggtgtgactgtgaggccacagcccagcccgagagccctctctgtaaccaggggaatggg
acctacgagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgt
gccgacggggactacaggccctcagaccagggcaactgcagccccaaacctgaggacccc
atctgcggtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggcttt
ggaaaggtgtggggcaagtactgcgagtgtgacgacttcaactgcctgcgcttcaaagga
gagatctgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactgg
atgggggagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctg
ctgtgcagcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcc
tacggggccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaa
tgtgttgaatgtcagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccga
atctgcagggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtg
aactgcacctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgcc
agcggaaagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctg
gtggttctcatggcggtggcgggggccatcttgtttctgggactggctggcctgctcatc
tggaagctgctggtcaccgtccacgaccgccgagagttcgccaagtttgaggaggagagg
gctaaggccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttc
accaatgtgacctaccgtgggaactcttga
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