Salmo trutta (river trout): 115197715
Help
Entry
115197715 CDS
T08542
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A-like isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115197715
03036 Chromosome and associated proteins [BR:
stru03036
]
115197715
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115197715
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115197715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
T3SSipB
TcaA_2nd
Exonuc_VII_L
UPF0242
SLFN-g3_helicase
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
115197715
NCBI-ProteinID:
XP_029615350
Ensembl:
ENSSTUG00000006428
LinkDB
All DBs
Position
7:complement(57420058..57452615)
Genome browser
AA seq
525 aa
AA seq
DB search
MDAFEGLHSVQLSSSPPASTCNPGYEVLVSARSGVQVYSNPTFYGKPSVLGHAQRRGRDK
YPSYREDTKEERCEVGRLVDLEPGPSPLVDGGGPADPGSTRPQEGAVTQAWSQIRGREGS
RLEGATQLEVARGGEHEDNVSRLRSSSLEIREKGSEILREQLDAAQQELKLKDKECERLS
QVRDQLEQELEELTASLFEEAHKMVREANVKQAAAEKQLKEAQGKIDVLQAEVSALKTMV
LTSTPSSPNRQAHPQLLSPGTRSKGASPRHGGGHTRNKSASWALPLAPGGNLDPPSVSLQ
PVREDKEPTVPALLSLILCLVPGHSISVTYEPYWAERGEGPRSLSRQMDNVLYAEFLTWK
DRPSLDRTSAFLGRIYREDIGPCLSFTKSELSQSVQNAVENNSLTIEPVAVSTLPVVKAN
AVECGGPNGLRAAVETKCALSGLSRSCKHRIKLGDRESYYYISPSSRARVPKHITAVCNF
FTYIRYIQQGLVRHDAEQMFWEVTRLRREMTVAKLGFYLTDTDQG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttgagggtctccacagtgtccagctgtcctcctctccgcctgcctccacc
tgcaacccggggtatgaggtcctagtatcagctaggtctggtgtccaggtatactccaac
cctacgttctatggaaaacctagtgttctggggcatgcacagcggagagggagagacaaa
tatccctcctaccgagaggacactaaagaggagaggtgtgaggttggaaggttggtagac
ctggagcccggtccgagtcccctggtggacggtggtgggccggctgacccaggttccacc
aggccccaggagggagctgttacccaggcctggagccagatcaggggcagggagggcagc
aggctggagggtgctacccagctggaggttgcccggggcggggagcatgaggacaacgtg
tcccgcctccggagctcttccctggagatcagagagaaaggatcagagatcctacgggaa
caactggatgctgcacagcaggagctgaagctgaaggataaggagtgtgagcgtctgtcg
caggtcagagatcagctggagcaggagctggaagagctcactgccagtctatttgaggaa
gctcacaagatggtgcgtgaagccaacgtgaaacaagcagcagcagagaagcagctgaag
gaggctcagggcaagattgatgtccttcaggcggaggtgtcagccctgaagaccatggtc
ctgacctccaccccctcttcccccaaccgccaagcccaccctcagctcctctccccgggc
actaggtccaagggggccagcccccgccatggaggaggacacacgcgcaacaaaagcgcc
agctgggccttgccattggcccctggtgggaacttagacccgccctctgtctccctgcag
ccagtcagagaggacaaagagcctacggttcctgcgctcctctctctgattttgtgtctg
gttccgggccactcgatctctgtgacctatgaaccctactgggcagagaggggggagggg
ccacgctctctcagccgacagatggacaacgtgctgtatgcagagttcctgacctggaaa
gacagacctagtctggacagaacgtcagccttcctgggccgtatctacagagaggacatc
ggcccctgtctctccttcaccaaatctgagttgtctcagtcggtgcagaacgcagtggag
aacaactcgctgaccatcgaaccagtggccgtgtccactttacccgtggtcaaagccaac
gccgtagagtgtggcggacccaatggcctaagagcagcagtagagacgaagtgtgcgttg
agtggcttgtctcggtcctgtaagcatcgcatcaaacttggagaccgagagagttactac
tacatctctccctccagcagggcacgggtacccaaacatatcacagctgtgtgtaatttc
ttcacctatatccgctacattcagcagggcctggtcagacatgatgcggagcagatgttc
tgggaagtgacacgtctacggagggagatgactgtggccaagctgggcttctacctcaca
gacacagaccagggatag
DBGET
integrated database retrieval system
