Salmo trutta (river trout): 115197735 Help Entry 115197735         CDS       T08542                                  Symbol ighmbp2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:stru03009]     115197735 (ighmbp2)    03012 Translation factors [BR:stru03012]     115197735 (ighmbp2) Enzymes [BR:stru01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      115197735 (ighmbp2)     5.6.2.5  RNA 5'-3' helicase      115197735 (ighmbp2) Ribosome biogenesis [BR:stru03009]  Eukaryotic type   Other ribosome biogenesis factors    115197735 (ighmbp2) Translation factors [BR:stru03012]  Eukaryotic type   Initiation factors    Initiation associated factors     115197735 (ighmbp2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_19 AAA_30 zf-AN1 Viral_helicase1 DEAD UvrD-helicase nSTAND3 Helicase_RecD AAA_16 ResIII AAA_22 SLFN-g3_helicase IstB_IS21 HEM4 T2SSE PhoH ABC_tran AAA DnaB_C ATPase AAA_25 Zot NPHP3_N AAA_31 AAA_18 UvrD_C_2 Flavi_DEAD ATPase_2 Herpes_ori_bp SRP54 DDHD AAA_33 Motif Other DBs NCBI-GeneID:  115197735 NCBI-ProteinID:  XP_029615389 Ensembl:  ENSSTUG00000007819 UniProt:  A0A673XLD4 LinkDB All DBs Position 7:58265858..58301485 Genome browser AA seq 1011 aa AA seqDB search MEVECFVSKTLELLQEEREAEIEETKLWQENVSLKDLQSKGVCLLKLQIGSQSTGLYGRS LLLLEPRKHMGVSVLPSNNFGPGDIVGLYDLDGCKPSSQLCTGVVTRISQSAVTVACEDS PDGLNLDTDALYNLMKLANDVTYKRMKKALNTLNGYSSGPAADLISVLFGYSEPGSISQP NDLSFLNTGLDESQRQAVSFALSQREVAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCA GSNVAVDNLVERLAKAKAKVLRLGHPARLLESIQKHSLDAVLAHSDNTNIIADIRKDIDK AFMGMKKMNDKRDRIHLKREVGELRKELRTREATAIAEVLKRADVVLATNTGANDGGPLK NLPVDHFDWVVIDECAQALESSCWIALLRGRKCILAGDYKQLPPTIKSHTAASKGLSVSL MERLIQKYGDSVVRMLTVQYRMNINIMTWASEQMYQGQLTAHSSVEKHLLKDLPGVASVE ETSTPLLLIDTAGCGLSEMEVTDEQSKGNQGEVDIVELHIKALTEAGVKPKDIAVIAPYN LQVDLLRQRLSARHPDLEIKSVDGFQGREKEAVVLTLVRSNRKGEIGFLAEDRRINVAVT RARRHLALVCDTQTVQTHGFLKTLIDHMTQHGDVRTAFEYLQDIVPQNYTRDHRDIKSNN TKATASSSSSTSNKQKDRGQAGSKVEPGHKKTSGGNTTQGGEPQTGSGPSTHSQARRSTP TEEEQRLTQIKYLEIKGQVEWFLQDPDQTELRFPSSLNSHDRLLVHQVAEELGLNHESQG EGKDRCITVSRPPTGPNEAGEEEEQQALQPAAALEEDSVTGPPVEQPAAPADLKTLHLER MRREQEKREQKKREQEKHLDTVRTAGQTQTAKKAKAKGKTKKTKAGACEIAAAATADVDF DTLIDAVVKAERVCSFVKCKTLVIHLGQLCLFCNRQYCLGHHIPEVHGCGDQAKANARMR ISKEGVLYAGSGHKDKSVDPNKKAYLHRKLDSKLKDMEKQRKTKPKESDNN NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt atggaggtggaatgctttgtgtccaagaccctagagctccttcaggaggagagagaagca gagatcgaggagacaaagctatggcaggagaatgtctctctgaaagatctccagagtaaa ggcgtttgtcttctgaagctgcagataggaagccagtcaactggcctttatggacgatca ctactccttctagaacccagaaaacacatgggcgtctctgtgctgcctagcaacaacttt ggacccggagacatagtgggtctgtatgacctggatggctgtaagccgtcctcccagctg tgtactggtgtcgtgacccgcatcagtcagtcggctgtaaccgtagcctgtgaggactcg ccagacgggctcaacctggacacggacgctttgtacaacctcatgaagctggctaacgat gtcacatacaaacgcatgaaaaaggccttgaacactctgaatgggtacagcagtggacca gctgctgatttgatcagcgttctctttggctattcagaacctggctctatatcacaacca aatgatctgtctttcctgaacactggtctggatgagtctcagagacaggcggtgtcgttt gctctgtctcagagagaggtagctgtaatacacggaccgccaggcaccggcaagacaacc actgtggtggaaatcatcctgcaagcggtcaaacagggacagaaggtcctgtgctgtgct ggttctaacgtggcggtggataacctggtagagcgtttggctaaggccaaagctaaggtc ctgagactgggtcaccctgcccgcctgctagagtccattcagaaacactcgctagacgcc gtcctcgctcacagtgacaacaccaacatcatcgctgatatacgcaaagacattgacaaa gcttttatggggatgaagaagatgaatgacaaacgagatcggatccacctgaagagggag gtaggagagctgaggaaagagctgaggaccagggaagctacagccattgctgaggtcctc aaacgtgctgatgttgttctagctactaacacaggtgctaatgatggtggccctctgaag aacctacctgtagaccattttgactgggtggtgatcgatgagtgtgcccaggcgctggag agctcttgctggatcgctctgctcagaggcaggaagtgtatcctggctggagactacaag cagctgccacccaccatcaagtctcacacagctgcatctaaaggcctgtctgtcagcttg atggagaggttgatccagaagtatggagactccgtagtcaggatgctgaccgtacagtac cgtatgaacattaacatcatgacctgggcctcagaacagatgtaccagggccaactcacc gcacacagctcagtggagaaacacctgctcaaagatctacccggagtagccagtgttgaa gagaccagcactcctctcctcctcatagacacagcaggctgtggacttagtgagatggag gtgacagacgaacagtccaaaggaaaccaaggtgaggtcgacattgtggaactacacatc aaagcgttgactgaagctggggtgaaacctaaagacatcgctgtcattgccccttacaat ctgcaggtggatctcctgcgtcaacgtctctcagcgagacatcctgatctggagatcaag tctgtagacggctttcagggcagagagaaggaggctgtggtgctgaccttggtcagatct aacaggaaaggtgagatagggttcttagctgaagacaggaggatcaacgtggcggtgact cgagccagacgtcacctggccctggtgtgtgacacgcagaccgtccagacccacggcttc ctcaagaccctcatcgatcacatgacccagcacggagacgtacgcaccgcttttgagtac ctgcaggacattgtgccccagaactacaccagagaccacagagatattaagtctaacaac actaaagctaccgctagcagctcttcatccacctccaacaagcagaaggacagaggccag gctgggagcaaggtggagccaggacacaagaagacctctggggggaacacgacccaggga ggagagccccagacaggttcaggtcccagcacacacagccaagccagacgttccaccccg acagaagaggaacagagactgacccagataaaatacctggagatcaagggccaggtggag tggttcctacaggacccagaccagacggagctacggtttccctcgtccctcaactcccac gaccgcctgctcgtacaccaggttgcagaggaactgggcctgaaccatgagagccaggga gaaggaaaggacagatgcatcactgtctccagacccccaacagggcctaacgaggctggg gaagaagaggagcaacaagccctgcaaccagcagccgccctggaggaagacagtgttaca gggcctcctgtagagcaaccggcagcacctgcagatctcaagactttacatttggaacga atgagacgggagcaggagaagagggagcagaagaagagggagcaggagaagcatctagat accgtccgtacagcaggacagactcagactgctaagaaggccaaggcaaaaggaaagacc aaaaagaccaaagcgggtgcctgtgagatcgctgcggctgcgacagcggacgttgatttt gacaccctaatagatgctgtggtgaaggcagaacgcgtctgtagtttcgtcaagtgtaaa acgttagtaattcacctgggacaactctgtctcttctgcaacagacaatactgcctcggt caccacatacctgaggtccatgggtgtggagaccaagccaaggccaatgccaggatgagg atcagtaaagaaggggttctgtatgctggtagtggacacaaggacaagtctgtagatcct aacaagaaggcctatctacacaggaagctggactccaaactcaaagacatggaaaagcag cggaagaccaaacccaaagagagtgacaataattga

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