Salmo trutta (river trout): 115197752
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Entry
115197752 CDS
T08542
Name
(RefSeq) beta-hexosaminidase subunit alpha-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00511
Other glycan degradation
stru00513
Various types of N-glycan biosynthesis
stru00520
Amino sugar and nucleotide sugar metabolism
stru00531
Glycosaminoglycan degradation
stru00600
Sphingolipid metabolism
stru00603
Glycosphingolipid biosynthesis - globo and isoglobo series
stru00604
Glycosphingolipid biosynthesis - ganglio series
stru01100
Metabolic pathways
stru04142
Lysosome
Module
stru_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115197752
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
115197752
00513 Various types of N-glycan biosynthesis
115197752
00531 Glycosaminoglycan degradation
115197752
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
115197752
00604 Glycosphingolipid biosynthesis - ganglio series
115197752
00511 Other glycan degradation
115197752
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115197752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
stru03110
]
115197752
Enzymes [BR:
stru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
115197752
Chaperones and folding catalysts [BR:
stru03110
]
Intramolecular chaperones
Others
115197752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
115197752
NCBI-ProteinID:
XP_029615413
Ensembl:
ENSSTUG00000002155
LinkDB
All DBs
Position
7:complement(59361951..59434661)
Genome browser
AA seq
539 aa
AA seq
DB search
MEEKCISNSRRCYKQWFGFMVLIMSFCVSYVDAVWPMPQMISSSMARYTLNPREFLFQYS
SGSSAQSGCSVLDSAFKRYFPLIFTDYSAARPRQHDEWFRFPFTVVVHVERAECEDYPDA
DSSESYKLSVRSGQAALRAETVWGALRGLESFSQLVYQDDFGEYFVNETEIEDFPRFQFR
GILLDTSRHYLPLHAILKTLDAMSYNKFNVFHWHIVDDPSFPYQSSTFPDLSRKGAFHPS
THVYTQIDVKRVIAHARLRGIRVLAEFDSPGHTQSWGKGQPGLLTPCYKGTVPSGTFGPV
NPANFSSYQFMTRLFKEVTSVFPDSYIHLGGDEVDFTCWKSNPDVRGFMLKMGFGTDYTK
LESYYMENMVNITKGLNKTAIVWQDVFDYHEKIPVDTVLHIWKGSPGQIQQELSTITLAG
YRVILAAPWYINHINYGQDWKTYYTIQPLNFTGTEQQKKLVIGGEVCMWGEYVDATNLSP
RLWPRASAAAERLWSDERMTSSVIDAYPRLVDFRCRLLRRGIQAEPLFVGHCRHEYQGI
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaatgtatctccaactccaggcgttgttataaacaatggtttgggttcatg
gttttgatcatgtccttctgtgtatcctacgtggatgcggtgtggccgatgcctcagatg
atcagctcttccatggcccggtacactctaaatccacgggagtttctttttcagtactct
agtggatcatccgctcaatccggttgttctgttctggactcggcttttaagagatacttc
ccgctcatcttcacggattatagtgcagcaagacccagacagcacgatgagtggtttagg
ttccctttcaccgttgtggtccatgtggagagagcagaatgtgaggactatccagacgca
gactcctcagaaagctacaagctgagtgtgcgttcgggccaggcagcactgagggctgag
acggtatggggagcactcagaggtttggagtcattcagtcagctggtctaccaagatgac
tttggggagtattttgtgaatgagactgagatagaagactttccccgcttccagttccga
gggatattattggatacgtcacgtcactacctacctttacacgctattctgaagaccctg
gatgcgatgtcctacaacaagttcaatgttttccactggcacatcgtggacgacccctcc
ttcccctaccagagtagcaccttccctgacctcagcagaaagggggcgttccatccgtca
acccatgtgtacacccagatagacgtgaagagggttatcgcccacgccagactcagagga
atcagggtgctggctgaatttgactccccgggacacacccagtcatggggcaaaggacag
cccggtctcctgaccccctgctataagggcacagttccctctgggacgttcggtccagtg
aacccagccaacttctccagctaccagttcatgactcgcctgtttaaagaggtcacctca
gtgtttcctgactcttacatccacctgggaggtgacgaggtagacttcacctgctggaag
tccaaccctgatgtccgaggcttcatgctgaagatggggtttggaactgactacacaaaa
ctggaatcctactacatggaaaatatggtgaacattactaagggactcaacaagacagcc
atagtctggcaggatgtgtttgactaccatgaaaaaatcccagtggacacggtgctccac
atctggaagggtagtccaggtcagatacagcaggagctgagtaccatcaccctggctggg
tacagggtcatactggctgccccctggtacatcaaccacatcaactacggacaggactgg
aaaacgtactacaccatacagccactcaacttcactggtacagagcagcagaagaaactg
gtgattggtggagaggtgtgcatgtggggagagtatgttgatgctaccaacctctctcct
cgtctctggccgagggcgagtgctgctgcagagcggctgtggagtgatgagaggatgacc
tccagtgtgatcgacgcctaccctcgcctcgtggacttccgctgcaggctactaaggcgc
ggtatccaggcagagcctctgtttgtgggtcactgcagacatgagtatcagggtatctga
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integrated database retrieval system